RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 WIPF1O43516 503 aa6.34□□□□□ -1.39
SMC1B-202ENST00000404354 RETNQ9HD89 108 aa6.34□□□□□ -1.39
SMC1B-202ENST00000404354 LYRM9A8MSI8 78 aa6.34□□□□□ -1.39
SMC1B-202ENST00000404354 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
SMC1B-202ENST00000404354 LELP1Q5T871 98 aa6.33□□□□□ -1.4
SMC1B-202ENST00000404354 C16orf95Q9H693 158 aa6.33□□□□□ -1.4
SMC1B-202ENST00000404354 VPREB1P12018 145 aa6.33□□□□□ -1.4
SMC1B-202ENST00000404354 C9orf66Q5T8R8 295 aa6.33□□□□□ -1.4
SMC1B-202ENST00000404354 PDE6GP18545 87 aa6.33□□□□□ -1.4
SMC1B-202ENST00000404354 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 SPART-AS1P0CW21 52 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 COL6A5A8TX70 2615 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 Q6ZRP5 223 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 PRO0628Q9UI54 55 aa6.32□□□□□ -1.4
SMC1B-202ENST00000404354 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
SMC1B-202ENST00000404354 SMIM29Q86T20 159 aa6.31□□□□□ -1.4
SMC1B-202ENST00000404354 Q8NAQ8 132 aa6.31□□□□□ -1.4
SMC1B-202ENST00000404354 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMC1B-202ENST00000404354 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 PRYO14603 147 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 PRR34Q9NV39 138 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 M0R378 163 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
SMC1B-202ENST00000404354 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
SMC1B-202ENST00000404354 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
SMC1B-202ENST00000404354 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
SMC1B-202ENST00000404354 SERTAD4-AS1Q5TG53 156 aa6.29□□□□□ -1.4
SMC1B-202ENST00000404354 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
SMC1B-202ENST00000404354 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
SMC1B-202ENST00000404354 APOC4P55056 127 aa6.28□□□□□ -1.4
SMC1B-202ENST00000404354 KPRPQ5T749 579 aaPredicted RBP6.28□□□□□ -1.4
SMC1B-202ENST00000404354 Q8N377 158 aa6.27□□□□□ -1.4
SMC1B-202ENST00000404354 OCR1Q9BZK8 76 aa6.27□□□□□ -1.4
SMC1B-202ENST00000404354 C15orf56Q8N910 161 aa6.27□□□□□ -1.41
SMC1B-202ENST00000404354 NSD1Q96L73 2696 aaPredicted RBP6.27□□□□□ -1.41
SMC1B-202ENST00000404354 Q6ZTC4 211 aa6.27□□□□□ -1.41
SMC1B-202ENST00000404354 BCE1O60756 84 aa6.26□□□□□ -1.41
SMC1B-202ENST00000404354 NDUFC1O43677 76 aa6.26□□□□□ -1.41
SMC1B-202ENST00000404354 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
SMC1B-202ENST00000404354 PSPHP1O15172 72 aa6.25□□□□□ -1.41
SMC1B-202ENST00000404354 EGFEM1PQ0D2K5 195 aa6.25□□□□□ -1.41
SMC1B-202ENST00000404354 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
SMC1B-202ENST00000404354 ESRGQ1W209 222 aa6.25□□□□□ -1.41
SMC1B-202ENST00000404354 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
SMC1B-202ENST00000404354 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
SMC1B-202ENST00000404354 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
SMC1B-202ENST00000404354 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 INAFM1C9JVW0 142 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 K7EQZ3 153 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 UBE2BP63146 152 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 CASC10Q5T4H9 136 aa6.23□□□□□ -1.41
SMC1B-202ENST00000404354 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.41
SMC1B-202ENST00000404354 Q9BRP9 147 aa6.21□□□□□ -1.42
SMC1B-202ENST00000404354 H3BQ85 93 aa6.21□□□□□ -1.42
SMC1B-202ENST00000404354 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
SMC1B-202ENST00000404354 C1orf195Q5TG92 126 aa6.2□□□□□ -1.42
SMC1B-202ENST00000404354 C1orf64Q8NEQ6 169 aa6.2□□□□□ -1.42
SMC1B-202ENST00000404354 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
SMC1B-202ENST00000404354 A0A096LNI7 61 aa6.18□□□□□ -1.42
SMC1B-202ENST00000404354 COL7A1Q02388 2944 aa6.18□□□□□ -1.42
SMC1B-202ENST00000404354 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
SMC1B-202ENST00000404354 DSCR10P59022 87 aa6.18□□□□□ -1.42
SMC1B-202ENST00000404354 IGKV2-24A0A0C4DH68 120 aa6.17□□□□□ -1.42
SMC1B-202ENST00000404354 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
SMC1B-202ENST00000404354 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
SMC1B-202ENST00000404354 A8MU10 97 aa6.17□□□□□ -1.42
SMC1B-202ENST00000404354 Q6ZRX8 168 aa6.17□□□□□ -1.42
SMC1B-202ENST00000404354 PRLHP81277 87 aa6.16□□□□□ -1.42
SMC1B-202ENST00000404354 DEFB131BA0A096LNP1 70 aa6.16□□□□□ -1.42
SMC1B-202ENST00000404354 IGLV5-48A0A075B6I7 105 aa6.15□□□□□ -1.42
SMC1B-202ENST00000404354 Q8NBF4 154 aa6.15□□□□□ -1.43
SMC1B-202ENST00000404354 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
SMC1B-202ENST00000404354 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
SMC1B-202ENST00000404354 A0A087WSZ3 146 aa6.14□□□□□ -1.43
SMC1B-202ENST00000404354 PSCAO43653 123 aa6.14□□□□□ -1.43
SMC1B-202ENST00000404354 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
SMC1B-202ENST00000404354 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
SMC1B-202ENST00000404354 ANK2Q01484 3957 aa6.13□□□□□ -1.43
SMC1B-202ENST00000404354 LINC00476Q8WZB0 136 aa6.13□□□□□ -1.43
SMC1B-202ENST00000404354 MGAM2Q2M2H8 2515 aa6.13□□□□□ -1.43
SMC1B-202ENST00000404354 A8MUN3 132 aa6.12□□□□□ -1.43
SMC1B-202ENST00000404354 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
SMC1B-202ENST00000404354 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
SMC1B-202ENST00000404354 V9GYY9 64 aa6.12□□□□□ -1.43
SMC1B-202ENST00000404354 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
SMC1B-202ENST00000404354 KRTAP10-11P60412 298 aa6.11□□□□□ -1.43
SMC1B-202ENST00000404354 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
SMC1B-202ENST00000404354 TRAV22A0A0B4J277 110 aa6.1□□□□□ -1.43
SMC1B-202ENST00000404354 C11orf45Q8TAV5 145 aa6.1□□□□□ -1.43
SMC1B-202ENST00000404354 IGFL1Q6UW32 110 aa6.09□□□□□ -1.43
SMC1B-202ENST00000404354 KRTAP4-16G5E9R7 235 aaPredicted RBP6.08□□□□□ -1.44
SMC1B-202ENST00000404354 TNP2Q05952 138 aa6.08□□□□□ -1.44
SMC1B-202ENST00000404354 LINC01556Q5JQF7 62 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms