RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 ASB16-AS1Q495Z4 193 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 S100A7L2Q5SY68 101 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 Q9BRP9 147 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 HSPB8Q9UJY1 196 aa8.04□□□□□ -1.12
SNRNP25-203ENST00000397876 NDUFC2O95298 119 aa8.03□□□□□ -1.12
SNRNP25-203ENST00000397876 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
SNRNP25-203ENST00000397876 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
SNRNP25-203ENST00000397876 TRAV23DV6A0A075B6W5 121 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 SLC25A20O43772 301 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 IGLV6-57P01721 117 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 IGKCP01834 107 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 FABP4P15090 132 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 LINC00310P59036 64 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 Q8N377 158 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 PMCHL2Q9BQD1 86 aa8.01□□□□□ -1.13
SNRNP25-203ENST00000397876 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
SNRNP25-203ENST00000397876 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
SNRNP25-203ENST00000397876 NPC2P61916 151 aa7.98□□□□□ -1.13
SNRNP25-203ENST00000397876 COA6Q5JTJ3 125 aaKnown RBP7.98□□□□□ -1.13
SNRNP25-203ENST00000397876 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
SNRNP25-203ENST00000397876 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
SNRNP25-203ENST00000397876 A0A0J9YXY3 114 aa7.96□□□□□ -1.14
SNRNP25-203ENST00000397876 HINT1P49773 126 aaPredicted RBP7.96□□□□□ -1.14
SNRNP25-203ENST00000397876 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
SNRNP25-203ENST00000397876 PYY3Q5JQD4 70 aa7.96□□□□□ -1.14
SNRNP25-203ENST00000397876 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
SNRNP25-203ENST00000397876 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
SNRNP25-203ENST00000397876 E9PLD3 99 aa7.94□□□□□ -1.14
SNRNP25-203ENST00000397876 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
SNRNP25-203ENST00000397876 ADAMTSL4-AS1Q5T5F5 129 aa7.94□□□□□ -1.14
SNRNP25-203ENST00000397876 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
SNRNP25-203ENST00000397876 XP32Q5T750 250 aa7.93□□□□□ -1.14
SNRNP25-203ENST00000397876 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
SNRNP25-203ENST00000397876 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
SNRNP25-203ENST00000397876 SPANXCQ9NY87 97 aa7.92□□□□□ -1.14
SNRNP25-203ENST00000397876 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
SNRNP25-203ENST00000397876 OR13C6PQ8NH95 151 aa7.91□□□□□ -1.14
SNRNP25-203ENST00000397876 LINC00308Q8TCZ7 52 aa7.9□□□□□ -1.14
SNRNP25-203ENST00000397876 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
SNRNP25-203ENST00000397876 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
SNRNP25-203ENST00000397876 SPRR1BP22528 89 aa7.89□□□□□ -1.15
SNRNP25-203ENST00000397876 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
SNRNP25-203ENST00000397876 TIMM17BO60830 172 aa7.88□□□□□ -1.15
SNRNP25-203ENST00000397876 LITAFQ99732 161 aa7.88□□□□□ -1.15
SNRNP25-203ENST00000397876 SPANXDQ9BXN6 97 aa7.88□□□□□ -1.15
SNRNP25-203ENST00000397876 HRCT1Q6UXD1 115 aa7.86□□□□□ -1.15
SNRNP25-203ENST00000397876 LAMTOR3Q9UHA4 124 aa7.86□□□□□ -1.15
SNRNP25-203ENST00000397876 ZNF815PA8K554 130 aa7.85□□□□□ -1.15
SNRNP25-203ENST00000397876 COX7BP24311 80 aa7.84□□□□□ -1.15
SNRNP25-203ENST00000397876 ELOF1P60002 83 aaKnown RBP7.84□□□□□ -1.15
SNRNP25-203ENST00000397876 LINC01545Q5VT33 79 aa7.84□□□□□ -1.15
SNRNP25-203ENST00000397876 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
SNRNP25-203ENST00000397876 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
SNRNP25-203ENST00000397876 SCGB1D1O95968 90 aa7.82□□□□□ -1.16
SNRNP25-203ENST00000397876 TAL2Q16559 108 aa7.82□□□□□ -1.16
SNRNP25-203ENST00000397876 PRO1933Q9H354 126 aa7.82□□□□□ -1.16
SNRNP25-203ENST00000397876 C14orf144Q96I85 54 aa7.81□□□□□ -1.16
SNRNP25-203ENST00000397876 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SNRNP25-203ENST00000397876 CD164Q04900 197 aa7.8□□□□□ -1.16
SNRNP25-203ENST00000397876 Q1RN00 199 aa7.8□□□□□ -1.16
SNRNP25-203ENST00000397876 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
SNRNP25-203ENST00000397876 TTTY13Q9BZ97 58 aa7.8□□□□□ -1.16
SNRNP25-203ENST00000397876 TEX49A0A1B0GTD5 131 aa7.79□□□□□ -1.16
SNRNP25-203ENST00000397876 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
SNRNP25-203ENST00000397876 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
SNRNP25-203ENST00000397876 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
SNRNP25-203ENST00000397876 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
SNRNP25-203ENST00000397876 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
SNRNP25-203ENST00000397876 TRBV7-6A0A0J9YX20 115 aa7.77□□□□□ -1.17
SNRNP25-203ENST00000397876 H7C2G1 150 aa7.77□□□□□ -1.17
SNRNP25-203ENST00000397876 A0A1B0GWB2 263 aa7.76□□□□□ -1.17
SNRNP25-203ENST00000397876 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
SNRNP25-203ENST00000397876 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
SNRNP25-203ENST00000397876 VAMP8Q9BV40 100 aa7.76□□□□□ -1.17
SNRNP25-203ENST00000397876 KRTDAPP60985 99 aa7.75□□□□□ -1.17
SNRNP25-203ENST00000397876 C20orf202A1L168 122 aa7.74□□□□□ -1.17
SNRNP25-203ENST00000397876 A6NDN8 102 aa7.74□□□□□ -1.17
SNRNP25-203ENST00000397876 IFITM1P13164 125 aa7.74□□□□□ -1.17
SNRNP25-203ENST00000397876 IGLV5-48A0A075B6I7 105 aa7.73□□□□□ -1.17
SNRNP25-203ENST00000397876 M0R143 59 aa7.73□□□□□ -1.17
SNRNP25-203ENST00000397876 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
SNRNP25-203ENST00000397876 Q5XG85 94 aa7.73□□□□□ -1.17
SNRNP25-203ENST00000397876 Q6ZVH6 145 aa7.72□□□□□ -1.17
SNRNP25-203ENST00000397876 SMIM29Q86T20 159 aa7.72□□□□□ -1.17
SNRNP25-203ENST00000397876 A4D1N5 150 aa7.71□□□□□ -1.18
SNRNP25-203ENST00000397876 NHP2Q9NX24 153 aaKnown RBP7.71□□□□□ -1.18
SNRNP25-203ENST00000397876 A0A1B0GV90 55 aa7.7□□□□□ -1.18
SNRNP25-203ENST00000397876 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms