RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
TM9SF1-202ENST00000396854 CCKP06307 115 aa9.65□□□□□ -0.86
TM9SF1-202ENST00000396854 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
TM9SF1-202ENST00000396854 C10orf25Q5T742 122 aa9.65□□□□□ -0.87
TM9SF1-202ENST00000396854 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
TM9SF1-202ENST00000396854 TNP2Q05952 138 aa9.63□□□□□ -0.87
TM9SF1-202ENST00000396854 S100A7L2Q5SY68 101 aa9.63□□□□□ -0.87
TM9SF1-202ENST00000396854 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
TM9SF1-202ENST00000396854 LINC00575Q6W349 94 aa9.62□□□□□ -0.87
TM9SF1-202ENST00000396854 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
TM9SF1-202ENST00000396854 C3orf22Q8N5N4 141 aa9.62□□□□□ -0.87
TM9SF1-202ENST00000396854 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
TM9SF1-202ENST00000396854 UQCRQO14949 82 aa9.61□□□□□ -0.87
TM9SF1-202ENST00000396854 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
TM9SF1-202ENST00000396854 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
TM9SF1-202ENST00000396854 IGLV6-57P01721 117 aa9.6□□□□□ -0.87
TM9SF1-202ENST00000396854 Q6ZRU5 148 aa9.6□□□□□ -0.87
TM9SF1-202ENST00000396854 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
TM9SF1-202ENST00000396854 ATOX1O00244 68 aa9.6□□□□□ -0.87
TM9SF1-202ENST00000396854 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
TM9SF1-202ENST00000396854 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.59□□□□□ -0.87
TM9SF1-202ENST00000396854 COX7CP15954 63 aa9.57□□□□□ -0.88
TM9SF1-202ENST00000396854 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
TM9SF1-202ENST00000396854 C9orf153Q5TBE3 101 aa9.57□□□□□ -0.88
TM9SF1-202ENST00000396854 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
TM9SF1-202ENST00000396854 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
TM9SF1-202ENST00000396854 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
TM9SF1-202ENST00000396854 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
TM9SF1-202ENST00000396854 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
TM9SF1-202ENST00000396854 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
TM9SF1-202ENST00000396854 RYR3Q15413 4870 aa9.53□□□□□ -0.88
TM9SF1-202ENST00000396854 PKD1P98161 4303 aa9.53□□□□□ -0.88
TM9SF1-202ENST00000396854 LOC110117498A0A087WWA1 95 aa9.53□□□□□ -0.88
TM9SF1-202ENST00000396854 H3BQ85 93 aa9.53□□□□□ -0.88
TM9SF1-202ENST00000396854 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.88
TM9SF1-202ENST00000396854 TRAV23DV6A0A075B6W5 121 aa9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 A0A087WVE0 104 aa9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 CRYGAP11844 174 aa9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 RBM3P98179 157 aaKnown RBP9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 Q6ZQT0 140 aa9.52□□□□□ -0.89
TM9SF1-202ENST00000396854 IGLV5-52A0A0A0MRZ9 124 aa9.51□□□□□ -0.89
TM9SF1-202ENST00000396854 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
TM9SF1-202ENST00000396854 DIRC1Q969H9 104 aa9.51□□□□□ -0.89
TM9SF1-202ENST00000396854 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
TM9SF1-202ENST00000396854 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
TM9SF1-202ENST00000396854 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 FUSP35637 526 aaKnown RBP eCLIP9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 Q6ZQY7 126 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 Q6ZRP5 223 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 SERP2Q8N6R1 65 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 LAMTOR3Q9UHA4 124 aa9.49□□□□□ -0.89
TM9SF1-202ENST00000396854 SMIM20Q8N5G0 67 aa9.48□□□□□ -0.89
TM9SF1-202ENST00000396854 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 VPREB1P12018 145 aa9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 PDE6GP18545 87 aa9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.47□□□□□ -0.89
TM9SF1-202ENST00000396854 COX7BP24311 80 aa9.46□□□□□ -0.89
TM9SF1-202ENST00000396854 C16orf90A8MZG2 172 aa9.46□□□□□ -0.9
TM9SF1-202ENST00000396854 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
TM9SF1-202ENST00000396854 A0A096LNI7 61 aa9.44□□□□□ -0.9
TM9SF1-202ENST00000396854 M0R378 163 aa9.44□□□□□ -0.9
TM9SF1-202ENST00000396854 GHRHP01286 108 aa9.44□□□□□ -0.9
TM9SF1-202ENST00000396854 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
TM9SF1-202ENST00000396854 SVIPQ8NHG7 77 aa9.43□□□□□ -0.9
TM9SF1-202ENST00000396854 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
TM9SF1-202ENST00000396854 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
TM9SF1-202ENST00000396854 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
TM9SF1-202ENST00000396854 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.9
TM9SF1-202ENST00000396854 Q6ZVQ6 151 aa9.4□□□□□ -0.9
TM9SF1-202ENST00000396854 CHTF8P0CG12 524 aa9.4□□□□□ -0.91
TM9SF1-202ENST00000396854 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
TM9SF1-202ENST00000396854 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
TM9SF1-202ENST00000396854 SPACA4Q8TDM5 124 aa9.39□□□□□ -0.91
TM9SF1-202ENST00000396854 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
TM9SF1-202ENST00000396854 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
TM9SF1-202ENST00000396854 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
TM9SF1-202ENST00000396854 PANO1I0J062 215 aa9.38□□□□□ -0.91
TM9SF1-202ENST00000396854 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
TM9SF1-202ENST00000396854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
TM9SF1-202ENST00000396854 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
TM9SF1-202ENST00000396854 BCE1O60756 84 aa9.36□□□□□ -0.91
TM9SF1-202ENST00000396854 CXCL6P80162 114 aa9.36□□□□□ -0.91
TM9SF1-202ENST00000396854 Q6ZSA8 131 aa9.36□□□□□ -0.91
TM9SF1-202ENST00000396854 TMEM258P61165 79 aa9.36□□□□□ -0.91
TM9SF1-202ENST00000396854 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
TM9SF1-202ENST00000396854 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
TM9SF1-202ENST00000396854 HAMPP81172 84 aa9.35□□□□□ -0.91
TM9SF1-202ENST00000396854 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
TM9SF1-202ENST00000396854 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
TM9SF1-202ENST00000396854 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
TM9SF1-202ENST00000396854 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
TM9SF1-202ENST00000396854 FAM30AQ9NZY2 134 aa9.33□□□□□ -0.92
TM9SF1-202ENST00000396854 KCNQ1DNQ9H478 68 aa9.33□□□□□ -0.92
TM9SF1-202ENST00000396854 J3KT08 172 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms