RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
HOXA3-202ENST00000396352 FAM236DA0A1B0GTK5 79 aa10.24□□□□□ -0.77
HOXA3-202ENST00000396352 FAM236CP0DP71 79 aa10.24□□□□□ -0.77
HOXA3-202ENST00000396352 TM2D3Q9BRN9 247 aa10.24□□□□□ -0.77
HOXA3-202ENST00000396352 C7orf33Q8WU49 177 aa10.23□□□□□ -0.77
HOXA3-202ENST00000396352 SNURFQ9Y675 71 aa10.22□□□□□ -0.77
HOXA3-202ENST00000396352 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
HOXA3-202ENST00000396352 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
HOXA3-202ENST00000396352 Q8N377 158 aa10.21□□□□□ -0.77
HOXA3-202ENST00000396352 RMI2Q96E14 147 aa10.21□□□□□ -0.77
HOXA3-202ENST00000396352 Q5XG85 94 aa10.21□□□□□ -0.78
HOXA3-202ENST00000396352 Q8N9L7 120 aa10.2□□□□□ -0.78
HOXA3-202ENST00000396352 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
HOXA3-202ENST00000396352 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
HOXA3-202ENST00000396352 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
HOXA3-202ENST00000396352 EPM2AB3EWF7 344 aa10.19□□□□□ -0.78
HOXA3-202ENST00000396352 TLX1NBP0CAT3 122 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 BPY2O14599 106 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
HOXA3-202ENST00000396352 KRTAP4-16G5E9R7 235 aaPredicted RBP10.17□□□□□ -0.78
HOXA3-202ENST00000396352 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
HOXA3-202ENST00000396352 NREPQ16612 68 aa10.17□□□□□ -0.78
HOXA3-202ENST00000396352 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
HOXA3-202ENST00000396352 PLA2G2DQ9UNK4 145 aa10.17□□□□□ -0.78
HOXA3-202ENST00000396352 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
HOXA3-202ENST00000396352 Q6ZRX8 168 aa10.16□□□□□ -0.78
HOXA3-202ENST00000396352 Q9BRP9 147 aa10.16□□□□□ -0.78
HOXA3-202ENST00000396352 F8WEM9 126 aa10.16□□□□□ -0.78
HOXA3-202ENST00000396352 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
HOXA3-202ENST00000396352 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
HOXA3-202ENST00000396352 SERP1Q9Y6X1 66 aa10.15□□□□□ -0.78
HOXA3-202ENST00000396352 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
HOXA3-202ENST00000396352 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
HOXA3-202ENST00000396352 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
HOXA3-202ENST00000396352 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
HOXA3-202ENST00000396352 IGLV5-37A0A075B6J1 123 aa10.13□□□□□ -0.79
HOXA3-202ENST00000396352 SPRR1AP35321 89 aa10.13□□□□□ -0.79
HOXA3-202ENST00000396352 PRYO14603 147 aa10.12□□□□□ -0.79
HOXA3-202ENST00000396352 TNP2Q05952 138 aa10.12□□□□□ -0.79
HOXA3-202ENST00000396352 MRAPQ8TCY5 172 aa10.12□□□□□ -0.79
HOXA3-202ENST00000396352 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
HOXA3-202ENST00000396352 ERC2-IT1O76042 136 aa10.11□□□□□ -0.79
HOXA3-202ENST00000396352 TMEM254Q8TBM7 123 aa10.11□□□□□ -0.79
HOXA3-202ENST00000396352 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
HOXA3-202ENST00000396352 NDUFC1O43677 76 aa10.11□□□□□ -0.79
HOXA3-202ENST00000396352 A0A1W2PNM2 257 aa10.1□□□□□ -0.79
HOXA3-202ENST00000396352 ST20-AS1Q8NBB2 130 aa10.1□□□□□ -0.79
HOXA3-202ENST00000396352 FLNBO75369 2602 aaKnown RBP10.1□□□□□ -0.79
HOXA3-202ENST00000396352 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
HOXA3-202ENST00000396352 HRCT1Q6UXD1 115 aa10.08□□□□□ -0.8
HOXA3-202ENST00000396352 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
HOXA3-202ENST00000396352 FUSP35637 526 aaKnown RBP eCLIP10.08□□□□□ -0.8
HOXA3-202ENST00000396352 STAB1Q9NY15 2570 aa10.07□□□□□ -0.8
HOXA3-202ENST00000396352 A0A1B0GW54 56 aa10.07□□□□□ -0.8
HOXA3-202ENST00000396352 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
HOXA3-202ENST00000396352 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
HOXA3-202ENST00000396352 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
HOXA3-202ENST00000396352 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
HOXA3-202ENST00000396352 Q8NBF4 154 aa10.05□□□□□ -0.8
HOXA3-202ENST00000396352 SPRR4Q96PI1 79 aa10.03□□□□□ -0.8
HOXA3-202ENST00000396352 MAST4O15021 2626 aa10.03□□□□□ -0.8
HOXA3-202ENST00000396352 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.8
HOXA3-202ENST00000396352 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
HOXA3-202ENST00000396352 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
HOXA3-202ENST00000396352 NOTCH1P46531 2555 aa10□□□□□ -0.81
HOXA3-202ENST00000396352 F8P00451 2351 aa10□□□□□ -0.81
HOXA3-202ENST00000396352 UBE2BP63146 152 aa9.99□□□□□ -0.81
HOXA3-202ENST00000396352 DSCR10P59022 87 aa9.99□□□□□ -0.81
HOXA3-202ENST00000396352 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
HOXA3-202ENST00000396352 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
HOXA3-202ENST00000396352 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
HOXA3-202ENST00000396352 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
HOXA3-202ENST00000396352 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
HOXA3-202ENST00000396352 LYSTQ99698 3801 aa9.97□□□□□ -0.81
HOXA3-202ENST00000396352 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
HOXA3-202ENST00000396352 LCE6AA0A183 80 aa9.96□□□□□ -0.82
HOXA3-202ENST00000396352 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
HOXA3-202ENST00000396352 DNAH10Q8IVF4 4471 aa9.95□□□□□ -0.82
HOXA3-202ENST00000396352 K7EQZ3 153 aa9.95□□□□□ -0.82
HOXA3-202ENST00000396352 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
HOXA3-202ENST00000396352 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
HOXA3-202ENST00000396352 NBEAL1Q6ZS30 2694 aa9.93□□□□□ -0.82
HOXA3-202ENST00000396352 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
HOXA3-202ENST00000396352 A0A1W2PNN7 141 aa9.92□□□□□ -0.82
HOXA3-202ENST00000396352 A0A096LNI7 61 aa9.91□□□□□ -0.82
HOXA3-202ENST00000396352 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
HOXA3-202ENST00000396352 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
HOXA3-202ENST00000396352 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
HOXA3-202ENST00000396352 PRLHP81277 87 aa9.89□□□□□ -0.83
HOXA3-202ENST00000396352 C16orf90A8MZG2 172 aa9.88□□□□□ -0.83
HOXA3-202ENST00000396352 DNAH9Q9NYC9 4486 aa9.88□□□□□ -0.83
HOXA3-202ENST00000396352 K7EIL1 84 aa9.87□□□□□ -0.83
HOXA3-202ENST00000396352 LINC00336Q6ZUF6 198 aa9.87□□□□□ -0.83
HOXA3-202ENST00000396352 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
HOXA3-202ENST00000396352 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
HOXA3-202ENST00000396352 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
HOXA3-202ENST00000396352 IGLV8-61A0A075B6I0 122 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms