RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
SNCA-204ENST00000394989 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
SNCA-204ENST00000394989 VPREB1P12018 145 aa9.18□□□□□ -0.94
SNCA-204ENST00000394989 RMI2Q96E14 147 aa9.18□□□□□ -0.94
SNCA-204ENST00000394989 Q6ZRP5 223 aa9.17□□□□□ -0.94
SNCA-204ENST00000394989 CSMD3Q7Z407 3707 aa9.17□□□□□ -0.94
SNCA-204ENST00000394989 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
SNCA-204ENST00000394989 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
SNCA-204ENST00000394989 LINC00336Q6ZUF6 198 aa9.17□□□□□ -0.94
SNCA-204ENST00000394989 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
SNCA-204ENST00000394989 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.95
SNCA-204ENST00000394989 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
SNCA-204ENST00000394989 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
SNCA-204ENST00000394989 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
SNCA-204ENST00000394989 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
SNCA-204ENST00000394989 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
SNCA-204ENST00000394989 MDFIQ99750 246 aa9.12□□□□□ -0.95
SNCA-204ENST00000394989 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
SNCA-204ENST00000394989 F8WDY8 70 aa9.12□□□□□ -0.95
SNCA-204ENST00000394989 F8WEM9 126 aa9.12□□□□□ -0.95
SNCA-204ENST00000394989 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
SNCA-204ENST00000394989 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
SNCA-204ENST00000394989 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
SNCA-204ENST00000394989 M0R378 163 aa9.1□□□□□ -0.95
SNCA-204ENST00000394989 H7BZZ5 65 aa9.1□□□□□ -0.95
SNCA-204ENST00000394989 ELOF1P60002 83 aaKnown RBP9.09□□□□□ -0.95
SNCA-204ENST00000394989 Q6ZQY7 126 aa9.09□□□□□ -0.95
SNCA-204ENST00000394989 MPLKIPQ8TAP9 179 aa9.09□□□□□ -0.95
SNCA-204ENST00000394989 TENM2Q9NT68 2774 aa9.08□□□□□ -0.96
SNCA-204ENST00000394989 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
SNCA-204ENST00000394989 SERTAD4-AS1Q5TG53 156 aa9.08□□□□□ -0.96
SNCA-204ENST00000394989 Q8N9L7 120 aa9.07□□□□□ -0.96
SNCA-204ENST00000394989 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
SNCA-204ENST00000394989 COX7BP24311 80 aa9.06□□□□□ -0.96
SNCA-204ENST00000394989 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
SNCA-204ENST00000394989 TLX1NBP0CAT3 122 aa9.06□□□□□ -0.96
SNCA-204ENST00000394989 TRBV7-6A0A0J9YX20 115 aa9.06□□□□□ -0.96
SNCA-204ENST00000394989 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
SNCA-204ENST00000394989 Q6ZVQ6 151 aa9.04□□□□□ -0.96
SNCA-204ENST00000394989 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
SNCA-204ENST00000394989 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
SNCA-204ENST00000394989 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.96
SNCA-204ENST00000394989 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.96
SNCA-204ENST00000394989 C7orf33Q8WU49 177 aa9.02□□□□□ -0.96
SNCA-204ENST00000394989 PRKDCP78527 4128 aaKnown RBP9.02□□□□□ -0.97
SNCA-204ENST00000394989 Q6ZQT0 140 aa9.02□□□□□ -0.97
SNCA-204ENST00000394989 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
SNCA-204ENST00000394989 TRAV7A0A075B6U4 112 aa9.02□□□□□ -0.97
SNCA-204ENST00000394989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
SNCA-204ENST00000394989 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
SNCA-204ENST00000394989 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
SNCA-204ENST00000394989 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
SNCA-204ENST00000394989 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
SNCA-204ENST00000394989 APLNQ9ULZ1 77 aa9□□□□□ -0.97
SNCA-204ENST00000394989 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
SNCA-204ENST00000394989 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
SNCA-204ENST00000394989 STARD9Q9P2P6 4700 aa8.99□□□□□ -0.97
SNCA-204ENST00000394989 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
SNCA-204ENST00000394989 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
SNCA-204ENST00000394989 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
SNCA-204ENST00000394989 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
SNCA-204ENST00000394989 H3BQ85 93 aa8.97□□□□□ -0.97
SNCA-204ENST00000394989 DNHD1Q96M86 4753 aa8.97□□□□□ -0.97
SNCA-204ENST00000394989 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.97
SNCA-204ENST00000394989 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
SNCA-204ENST00000394989 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
SNCA-204ENST00000394989 SMIM26A0A096LP01 95 aa8.94□□□□□ -0.98
SNCA-204ENST00000394989 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
SNCA-204ENST00000394989 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
SNCA-204ENST00000394989 KLKP1Q107X0 134 aa8.94□□□□□ -0.98
SNCA-204ENST00000394989 C3orf84H3BNL1 204 aa8.93□□□□□ -0.98
SNCA-204ENST00000394989 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
SNCA-204ENST00000394989 BPY2O14599 106 aa8.92□□□□□ -0.98
SNCA-204ENST00000394989 SPRR1AP35321 89 aa8.92□□□□□ -0.98
SNCA-204ENST00000394989 NREPQ16612 68 aa8.92□□□□□ -0.98
SNCA-204ENST00000394989 Q9BRP9 147 aa8.92□□□□□ -0.98
SNCA-204ENST00000394989 Q6ZRX8 168 aa8.91□□□□□ -0.98
SNCA-204ENST00000394989 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
SNCA-204ENST00000394989 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
SNCA-204ENST00000394989 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
SNCA-204ENST00000394989 PRYO14603 147 aa8.9□□□□□ -0.98
SNCA-204ENST00000394989 DEFB105AQ8NG35 78 aa8.9□□□□□ -0.98
SNCA-204ENST00000394989 PDE6GP18545 87 aa8.89□□□□□ -0.99
SNCA-204ENST00000394989 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
SNCA-204ENST00000394989 A0A096LNI7 61 aa8.89□□□□□ -0.99
SNCA-204ENST00000394989 PSCAO43653 123 aa8.89□□□□□ -0.99
SNCA-204ENST00000394989 Q8N377 158 aa8.89□□□□□ -0.99
SNCA-204ENST00000394989 HIGD2AQ9BW72 106 aa8.88□□□□□ -0.99
SNCA-204ENST00000394989 PRR4Q16378 134 aa8.88□□□□□ -0.99
SNCA-204ENST00000394989 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
SNCA-204ENST00000394989 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
SNCA-204ENST00000394989 DHRS4-AS1Q9P1J3 65 aa8.86□□□□□ -0.99
SNCA-204ENST00000394989 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
SNCA-204ENST00000394989 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
SNCA-204ENST00000394989 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
SNCA-204ENST00000394989 FAM30AQ9NZY2 134 aa8.85□□□□□ -0.99
SNCA-204ENST00000394989 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
SNCA-204ENST00000394989 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
SNCA-204ENST00000394989 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
SNCA-204ENST00000394989 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms