RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-207ENST00000394801 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.81
UBE2D3-207ENST00000394801 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
UBE2D3-207ENST00000394801 GHRHP01286 108 aa10.01□□□□□ -0.81
UBE2D3-207ENST00000394801 C5orf47Q569G3 176 aa10.01□□□□□ -0.81
UBE2D3-207ENST00000394801 Q6ZQT0 140 aa10.01□□□□□ -0.81
UBE2D3-207ENST00000394801 LAMTOR3Q9UHA4 124 aa10.01□□□□□ -0.81
UBE2D3-207ENST00000394801 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
UBE2D3-207ENST00000394801 RMI2Q96E14 147 aa10□□□□□ -0.81
UBE2D3-207ENST00000394801 PLA2G2DQ9UNK4 145 aa10□□□□□ -0.81
UBE2D3-207ENST00000394801 MGAM2Q2M2H8 2515 aa10□□□□□ -0.81
UBE2D3-207ENST00000394801 CASC10Q5T4H9 136 aa9.98□□□□□ -0.81
UBE2D3-207ENST00000394801 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
UBE2D3-207ENST00000394801 PDE6GP18545 87 aa9.97□□□□□ -0.81
UBE2D3-207ENST00000394801 SERTAD4-AS1Q5TG53 156 aa9.96□□□□□ -0.81
UBE2D3-207ENST00000394801 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.82
UBE2D3-207ENST00000394801 DSCR8Q96T75 97 aa9.96□□□□□ -0.82
UBE2D3-207ENST00000394801 UBL5Q9BZL1 73 aa9.95□□□□□ -0.82
UBE2D3-207ENST00000394801 IGLV5-37A0A075B6J1 123 aa9.95□□□□□ -0.82
UBE2D3-207ENST00000394801 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
UBE2D3-207ENST00000394801 DNAH9Q9NYC9 4486 aa9.95□□□□□ -0.82
UBE2D3-207ENST00000394801 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
UBE2D3-207ENST00000394801 FAM19A1Q7Z5A9 133 aa9.93□□□□□ -0.82
UBE2D3-207ENST00000394801 COL7A1Q02388 2944 aa9.93□□□□□ -0.82
UBE2D3-207ENST00000394801 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
UBE2D3-207ENST00000394801 BCE1O60756 84 aa9.92□□□□□ -0.82
UBE2D3-207ENST00000394801 M0R2N4 97 aa9.9□□□□□ -0.82
UBE2D3-207ENST00000394801 OXTP01178 125 aa9.9□□□□□ -0.82
UBE2D3-207ENST00000394801 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
UBE2D3-207ENST00000394801 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-207ENST00000394801 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
UBE2D3-207ENST00000394801 DYNC2H1Q8NCM8 4307 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-207ENST00000394801 SPRR1AP35321 89 aa9.88□□□□□ -0.83
UBE2D3-207ENST00000394801 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
UBE2D3-207ENST00000394801 PRYO14603 147 aa9.87□□□□□ -0.83
UBE2D3-207ENST00000394801 KRTAP1-5Q9BYS1 174 aa9.86□□□□□ -0.83
UBE2D3-207ENST00000394801 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
UBE2D3-207ENST00000394801 TRAV7A0A075B6U4 112 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 Q6ZRX8 168 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 DNAH10Q8IVF4 4471 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 Q6ZVQ6 151 aa9.85□□□□□ -0.83
UBE2D3-207ENST00000394801 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
UBE2D3-207ENST00000394801 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
UBE2D3-207ENST00000394801 LYSTQ99698 3801 aa9.83□□□□□ -0.84
UBE2D3-207ENST00000394801 Q5XG85 94 aa9.83□□□□□ -0.84
UBE2D3-207ENST00000394801 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-207ENST00000394801 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-207ENST00000394801 Q8N377 158 aa9.82□□□□□ -0.84
UBE2D3-207ENST00000394801 CNBPP62633 177 aaKnown RBP9.82□□□□□ -0.84
UBE2D3-207ENST00000394801 Q9BRP9 147 aa9.82□□□□□ -0.84
UBE2D3-207ENST00000394801 FAM236DA0A1B0GTK5 79 aa9.81□□□□□ -0.84
UBE2D3-207ENST00000394801 FAM236CP0DP71 79 aa9.81□□□□□ -0.84
UBE2D3-207ENST00000394801 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
UBE2D3-207ENST00000394801 CXCL6P80162 114 aa9.8□□□□□ -0.84
UBE2D3-207ENST00000394801 C4orf26Q17RF5 130 aa9.8□□□□□ -0.84
UBE2D3-207ENST00000394801 IGLV5-48A0A075B6I7 105 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 H7BZZ5 65 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 HAMPP81172 84 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 UBE2DNLQ8IWF7 75 aa9.79□□□□□ -0.84
UBE2D3-207ENST00000394801 C16orf90A8MZG2 172 aa9.78□□□□□ -0.84
UBE2D3-207ENST00000394801 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-207ENST00000394801 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
UBE2D3-207ENST00000394801 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
UBE2D3-207ENST00000394801 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
UBE2D3-207ENST00000394801 PSCAO43653 123 aa9.77□□□□□ -0.85
UBE2D3-207ENST00000394801 A0A096LNI7 61 aa9.75□□□□□ -0.85
UBE2D3-207ENST00000394801 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
UBE2D3-207ENST00000394801 REG3GQ6UW15 175 aa9.75□□□□□ -0.85
UBE2D3-207ENST00000394801 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
UBE2D3-207ENST00000394801 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
UBE2D3-207ENST00000394801 TNP2Q05952 138 aa9.74□□□□□ -0.85
UBE2D3-207ENST00000394801 DNAH7Q8WXX0 4024 aa9.73□□□□□ -0.85
UBE2D3-207ENST00000394801 A0A1B0GW54 56 aa9.72□□□□□ -0.85
UBE2D3-207ENST00000394801 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
UBE2D3-207ENST00000394801 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
UBE2D3-207ENST00000394801 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
UBE2D3-207ENST00000394801 NUPR2A6NF83 97 aa9.71□□□□□ -0.86
UBE2D3-207ENST00000394801 UBE2BP63146 152 aa9.7□□□□□ -0.86
UBE2D3-207ENST00000394801 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
UBE2D3-207ENST00000394801 NDUFC1O43677 76 aa9.7□□□□□ -0.86
UBE2D3-207ENST00000394801 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
UBE2D3-207ENST00000394801 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
UBE2D3-207ENST00000394801 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
UBE2D3-207ENST00000394801 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-207ENST00000394801 NREPQ16612 68 aa9.67□□□□□ -0.86
UBE2D3-207ENST00000394801 F8WEM9 126 aa9.67□□□□□ -0.86
UBE2D3-207ENST00000394801 C9orf163Q8N9P6 203 aa9.67□□□□□ -0.86
UBE2D3-207ENST00000394801 A0A1W2PNM2 257 aa9.66□□□□□ -0.86
UBE2D3-207ENST00000394801 C1orf137Q5JT78 98 aa9.66□□□□□ -0.86
UBE2D3-207ENST00000394801 VPS13DQ5THJ4 4388 aa9.65□□□□□ -0.86
UBE2D3-207ENST00000394801 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBE2D3-207ENST00000394801 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-207ENST00000394801 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
UBE2D3-207ENST00000394801 SMIM29Q86T20 159 aa9.65□□□□□ -0.86
UBE2D3-207ENST00000394801 ATP5EP56381 51 aaPredicted RBP9.65□□□□□ -0.87
UBE2D3-207ENST00000394801 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms