RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LINC00846Q9NV44 126 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
RTN4-205ENST00000394609 SND1-IT1Q9HBX3 110 aa4.63□□□□□ -1.67
RTN4-205ENST00000394609 IGKV2-28A0A075B6P5 120 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 IGKV2D-24A0A075B6R9 120 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 H3BQ85 93 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 IGKV2D-28P01615 120 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 PFN2P35080 140 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 LINC00158P58513 81 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 KIAA0087Q14695 138 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 Q5XG85 94 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 KRTAP26-1Q6PEX3 210 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 Q8IZM0 81 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 ORMDL1Q9P0S3 153 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 APLNQ9ULZ1 77 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 C1orf43Q9BWL3 253 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 C14orf132Q9NPU4 83 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
RTN4-205ENST00000394609 TMEM256-PLSCR3K7ERE1 68 aa4.61□□□□□ -1.67
RTN4-205ENST00000394609 ATP5EP56381 51 aaPredicted RBP4.61□□□□□ -1.67
RTN4-205ENST00000394609 SPAG11BQ08648 103 aa4.61□□□□□ -1.67
RTN4-205ENST00000394609 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
RTN4-205ENST00000394609 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
RTN4-205ENST00000394609 MIR7-3HGQ8N6C7 128 aa4.61□□□□□ -1.67
RTN4-205ENST00000394609 C10orf25Q5T742 122 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 UNQ6190/PRO20217Q6UXQ8 127 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 UBE2DNLQ8IWF7 75 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 CSMD3Q7Z407 3707 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 TGP01266 2768 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 A0A087WYN8 130 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 NUPR2A6NF83 97 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 NDUFC1O43677 76 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
RTN4-205ENST00000394609 IGKV3D-7A0A0C4DH55 119 aa4.59□□□□□ -1.67
RTN4-205ENST00000394609 OXTP01178 125 aa4.59□□□□□ -1.67
RTN4-205ENST00000394609 PDE6GP18545 87 aa4.59□□□□□ -1.67
RTN4-205ENST00000394609 CASC10Q5T4H9 136 aa4.59□□□□□ -1.67
RTN4-205ENST00000394609 UBL5Q9BZL1 73 aa4.59□□□□□ -1.67
RTN4-205ENST00000394609 LYSTQ99698 3801 aa4.59□□□□□ -1.68
RTN4-205ENST00000394609 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 LECT2O14960 151 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 C15orf56Q8N910 161 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 MUC7Q8TAX7 377 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 DSCR8Q96T75 97 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
RTN4-205ENST00000394609 C9orf129Q5T035 196 aaKnown RBP4.57□□□□□ -1.68
RTN4-205ENST00000394609 CAMK2N2Q96S95 79 aa4.57□□□□□ -1.68
RTN4-205ENST00000394609 A0A087WVE0 104 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 H7BZZ5 65 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 NCR3O14931 201 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 CXCL6P80162 114 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 COX17Q14061 63 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 C4orf26Q17RF5 130 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 C6orf48Q9UBA6 75 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
RTN4-205ENST00000394609 Q6ZRU5 148 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 Q8N814 137 aa4.56□□□□□ -1.68
RTN4-205ENST00000394609 GVQW2A0A096LPI5 108 aaPredicted RBP4.55□□□□□ -1.68
RTN4-205ENST00000394609 HRCT1Q6UXD1 115 aa4.55□□□□□ -1.68
RTN4-205ENST00000394609 RMI2Q96E14 147 aa4.55□□□□□ -1.68
RTN4-205ENST00000394609 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
RTN4-205ENST00000394609 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
RTN4-205ENST00000394609 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
RTN4-205ENST00000394609 M0R2N4 97 aa4.54□□□□□ -1.68
RTN4-205ENST00000394609 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
RTN4-205ENST00000394609 C20orf197Q8N268 126 aa4.54□□□□□ -1.68
RTN4-205ENST00000394609 Q8NDZ9 215 aa4.54□□□□□ -1.68
RTN4-205ENST00000394609 DNAH7Q8WXX0 4024 aa4.53□□□□□ -1.68
RTN4-205ENST00000394609 NBDYA0A0U1RRE5 68 aa4.53□□□□□ -1.68
RTN4-205ENST00000394609 PSCAO43653 123 aa4.53□□□□□ -1.68
RTN4-205ENST00000394609 Q6ZQT0 140 aa4.53□□□□□ -1.68
RTN4-205ENST00000394609 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
RTN4-205ENST00000394609 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
RTN4-205ENST00000394609 RBM3P98179 157 aaKnown RBP4.52□□□□□ -1.69
RTN4-205ENST00000394609 FAM30AQ9NZY2 134 aa4.52□□□□□ -1.69
RTN4-205ENST00000394609 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
RTN4-205ENST00000394609 FAM19A1Q7Z5A9 133 aa4.52□□□□□ -1.69
RTN4-205ENST00000394609 F8WDY8 70 aa4.51□□□□□ -1.69
RTN4-205ENST00000394609 LINC01547P58512 204 aaPredicted RBP4.51□□□□□ -1.69
RTN4-205ENST00000394609 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
RTN4-205ENST00000394609 Q6ZRP5 223 aa4.51□□□□□ -1.69
RTN4-205ENST00000394609 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
RTN4-205ENST00000394609 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
RTN4-205ENST00000394609 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
RTN4-205ENST00000394609 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
RTN4-205ENST00000394609 LY6G6CO95867 125 aa4.49□□□□□ -1.69
RTN4-205ENST00000394609 LINC00336Q6ZUF6 198 aa4.49□□□□□ -1.69
RTN4-205ENST00000394609 Q6ZVQ6 151 aa4.49□□□□□ -1.69
RTN4-205ENST00000394609 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
RTN4-205ENST00000394609 TRBV7-4A0A0J9YYF1 115 aa4.48□□□□□ -1.69
RTN4-205ENST00000394609 Q6ZRN7 208 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms