RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 VPS13DQ5THJ4 4388 aa13.1□□□□□ -0.31
ME3-202ENST00000393324 LOC107984640A0A0U1RRK4 108 aa13.09□□□□□ -0.31
ME3-202ENST00000393324 ATOX1O00244 68 aa13.09□□□□□ -0.31
ME3-202ENST00000393324 PLA2G2DQ9UNK4 145 aa13.09□□□□□ -0.31
ME3-202ENST00000393324 FBN3Q75N90 2809 aa13.08□□□□□ -0.31
ME3-202ENST00000393324 CNBPP62633 177 aaKnown RBP13.08□□□□□ -0.32
ME3-202ENST00000393324 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
ME3-202ENST00000393324 hADV29S1A0JD25 119 aa13.07□□□□□ -0.32
ME3-202ENST00000393324 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
ME3-202ENST00000393324 Q6JHZ5 121 aa13.06□□□□□ -0.32
ME3-202ENST00000393324 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
ME3-202ENST00000393324 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
ME3-202ENST00000393324 M0R2N4 97 aa13.04□□□□□ -0.32
ME3-202ENST00000393324 COX7BP24311 80 aa13.04□□□□□ -0.32
ME3-202ENST00000393324 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
ME3-202ENST00000393324 J3KT08 172 aa13.03□□□□□ -0.32
ME3-202ENST00000393324 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
ME3-202ENST00000393324 Q6ZRN7 208 aaPredicted RBP13.03□□□□□ -0.32
ME3-202ENST00000393324 IGLV5-37A0A075B6J1 123 aa13.03□□□□□ -0.32
ME3-202ENST00000393324 LRCOL1A6NCL2 159 aa13.03□□□□□ -0.32
ME3-202ENST00000393324 C14orf132Q9NPU4 83 aa13.03□□□□□ -0.32
ME3-202ENST00000393324 KRTAP7-1Q8IUC3 87 aa13.02□□□□□ -0.33
ME3-202ENST00000393324 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
ME3-202ENST00000393324 TMEM256-PLSCR3K7ERE1 68 aa13.01□□□□□ -0.33
ME3-202ENST00000393324 LINC00846Q9NV44 126 aa13.01□□□□□ -0.33
ME3-202ENST00000393324 RPS28P62857 69 aaKnown RBP13□□□□□ -0.33
ME3-202ENST00000393324 FAM19A5Q7Z5A7 132 aaPredicted RBP13□□□□□ -0.33
ME3-202ENST00000393324 CYSTM1Q9H1C7 97 aa13□□□□□ -0.33
ME3-202ENST00000393324 TGP01266 2768 aa12.99□□□□□ -0.33
ME3-202ENST00000393324 A0A096LNI7 61 aa12.98□□□□□ -0.33
ME3-202ENST00000393324 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
ME3-202ENST00000393324 C16orf90A8MZG2 172 aa12.98□□□□□ -0.33
ME3-202ENST00000393324 Q6ZQY7 126 aa12.97□□□□□ -0.33
ME3-202ENST00000393324 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
ME3-202ENST00000393324 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
ME3-202ENST00000393324 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.33
ME3-202ENST00000393324 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
ME3-202ENST00000393324 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
ME3-202ENST00000393324 IGLV1-50A0A075B6I6 118 aa12.96□□□□□ -0.34
ME3-202ENST00000393324 IGKV3D-7A0A0C4DH55 119 aa12.96□□□□□ -0.34
ME3-202ENST00000393324 TMEM258P61165 79 aa12.93□□□□□ -0.34
ME3-202ENST00000393324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.93□□□□□ -0.34
ME3-202ENST00000393324 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
ME3-202ENST00000393324 PRYO14603 147 aa12.92□□□□□ -0.34
ME3-202ENST00000393324 Q6ZR54 194 aa12.92□□□□□ -0.34
ME3-202ENST00000393324 A0A087WVE0 104 aa12.92□□□□□ -0.34
ME3-202ENST00000393324 JMJD7-PLA2G4BH0Y9G9 81 aa12.91□□□□□ -0.34
ME3-202ENST00000393324 A0A1W2PNN7 141 aa12.9□□□□□ -0.34
ME3-202ENST00000393324 CCKP06307 115 aa12.89□□□□□ -0.35
ME3-202ENST00000393324 H3BQ85 93 aa12.89□□□□□ -0.35
ME3-202ENST00000393324 CHTF8P0CG12 524 aa12.88□□□□□ -0.35
ME3-202ENST00000393324 SPRR1AP35321 89 aa12.88□□□□□ -0.35
ME3-202ENST00000393324 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
ME3-202ENST00000393324 KRTAP4-16G5E9R7 235 aaPredicted RBP12.88□□□□□ -0.35
ME3-202ENST00000393324 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
ME3-202ENST00000393324 LAMTOR3Q9UHA4 124 aa12.87□□□□□ -0.35
ME3-202ENST00000393324 A0A087WTM6 91 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 LY6G6CO95867 125 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 GHRHP01286 108 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 DNAH2Q9P225 4427 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 PKIGQ9Y2B9 76 aa12.86□□□□□ -0.35
ME3-202ENST00000393324 ATP5EP2Q5VTU8 51 aa12.85□□□□□ -0.35
ME3-202ENST00000393324 Q6ZRX8 168 aa12.85□□□□□ -0.35
ME3-202ENST00000393324 REG3GQ6UW15 175 aa12.82□□□□□ -0.36
ME3-202ENST00000393324 OXTP01178 125 aa12.82□□□□□ -0.36
ME3-202ENST00000393324 RBM3P98179 157 aaKnown RBP12.82□□□□□ -0.36
ME3-202ENST00000393324 DHRS4-AS1Q9P1J3 65 aa12.82□□□□□ -0.36
ME3-202ENST00000393324 Q9BRP9 147 aa12.81□□□□□ -0.36
ME3-202ENST00000393324 C1orf134Q5TEV5 83 aa12.81□□□□□ -0.36
ME3-202ENST00000393324 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
ME3-202ENST00000393324 LINC00476Q8WZB0 136 aa12.8□□□□□ -0.36
ME3-202ENST00000393324 HECTD4Q9Y4D8 3996 aa12.79□□□□□ -0.36
ME3-202ENST00000393324 PHF5AQ7RTV0 110 aaKnown RBP12.77□□□□□ -0.36
ME3-202ENST00000393324 DSCR8Q96T75 97 aa12.77□□□□□ -0.36
ME3-202ENST00000393324 PANO1I0J062 215 aa12.77□□□□□ -0.37
ME3-202ENST00000393324 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
ME3-202ENST00000393324 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
ME3-202ENST00000393324 DNAH6Q9C0G6 4158 aa12.75□□□□□ -0.37
ME3-202ENST00000393324 UBE2BP63146 152 aa12.75□□□□□ -0.37
ME3-202ENST00000393324 LOC110117498A0A087WWA1 95 aa12.74□□□□□ -0.37
ME3-202ENST00000393324 Q6ZQT0 140 aa12.74□□□□□ -0.37
ME3-202ENST00000393324 RTL8CO15255 209 aa12.73□□□□□ -0.37
ME3-202ENST00000393324 FAM19A1Q7Z5A9 133 aa12.73□□□□□ -0.37
ME3-202ENST00000393324 Q8N377 158 aa12.73□□□□□ -0.37
ME3-202ENST00000393324 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
ME3-202ENST00000393324 ERC2-IT1O76042 136 aa12.72□□□□□ -0.37
ME3-202ENST00000393324 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
ME3-202ENST00000393324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
ME3-202ENST00000393324 LINC01547P58512 204 aaPredicted RBP12.71□□□□□ -0.37
ME3-202ENST00000393324 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
ME3-202ENST00000393324 C3orf84H3BNL1 204 aa12.7□□□□□ -0.38
ME3-202ENST00000393324 ST20-AS1Q8NBB2 130 aa12.7□□□□□ -0.38
ME3-202ENST00000393324 Q5XG85 94 aa12.7□□□□□ -0.38
ME3-202ENST00000393324 PDE6GP18545 87 aa12.69□□□□□ -0.38
ME3-202ENST00000393324 ALMS1Q8TCU4 4167 aa12.69□□□□□ -0.38
ME3-202ENST00000393324 PRLHP81277 87 aa12.69□□□□□ -0.38
ME3-202ENST00000393324 TRBV7-4A0A0J9YYF1 115 aa12.68□□□□□ -0.38
ME3-202ENST00000393324 UBL5Q9BZL1 73 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms