RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 LOC107984640A0A0U1RRK4 108 aa16.5■□□□□ 0.23
SMARCD3-203ENST00000392811 DSCR8Q96T75 97 aa16.5■□□□□ 0.23
SMARCD3-203ENST00000392811 RPL37AP8A6NKH3 93 aa16.49■□□□□ 0.23
SMARCD3-203ENST00000392811 IGLV1-50A0A075B6I6 118 aa16.46■□□□□ 0.23
SMARCD3-203ENST00000392811 M0R2N4 97 aa16.46■□□□□ 0.23
SMARCD3-203ENST00000392811 LYSTQ99698 3801 aa16.46■□□□□ 0.23
SMARCD3-203ENST00000392811 DYNC2H1Q8NCM8 4307 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-203ENST00000392811 FAM19A5Q7Z5A7 132 aaPredicted RBP16.45■□□□□ 0.22
SMARCD3-203ENST00000392811 PSCAO43653 123 aa16.44■□□□□ 0.22
SMARCD3-203ENST00000392811 PDE6GP18545 87 aa16.44■□□□□ 0.22
SMARCD3-203ENST00000392811 PRYO14603 147 aa16.43■□□□□ 0.22
SMARCD3-203ENST00000392811 TRBV7-4A0A0J9YYF1 115 aa16.42■□□□□ 0.22
SMARCD3-203ENST00000392811 KRTAP4-16G5E9R7 235 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-203ENST00000392811 CCDC179H3BU77 68 aa16.41■□□□□ 0.22
SMARCD3-203ENST00000392811 MRPL55Q7Z7F7 128 aaKnown RBP16.41■□□□□ 0.22
SMARCD3-203ENST00000392811 UBL5Q9BZL1 73 aa16.41■□□□□ 0.22
SMARCD3-203ENST00000392811 SPRR1AP35321 89 aa16.4■□□□□ 0.22
SMARCD3-203ENST00000392811 Q6ZRX8 168 aa16.4■□□□□ 0.22
SMARCD3-203ENST00000392811 DNAH10Q8IVF4 4471 aa16.39■□□□□ 0.22
SMARCD3-203ENST00000392811 B5MCH6 92 aa16.39■□□□□ 0.21
SMARCD3-203ENST00000392811 CNBPP62633 177 aaKnown RBP16.39■□□□□ 0.21
SMARCD3-203ENST00000392811 HIST1H4AP62805 103 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-203ENST00000392811 ATP5EP2Q5VTU8 51 aa16.37■□□□□ 0.21
SMARCD3-203ENST00000392811 ETDCA0A1B0GVM5 59 aa16.36■□□□□ 0.21
SMARCD3-203ENST00000392811 DHRS4-AS1Q9P1J3 65 aa16.36■□□□□ 0.21
SMARCD3-203ENST00000392811 Q9BRP9 147 aa16.36■□□□□ 0.21
SMARCD3-203ENST00000392811 A0A087WVE0 104 aa16.35■□□□□ 0.21
SMARCD3-203ENST00000392811 A0A096LNI7 61 aa16.35■□□□□ 0.21
SMARCD3-203ENST00000392811 NUPR2A6NF83 97 aa16.35■□□□□ 0.21
SMARCD3-203ENST00000392811 CSMD3Q7Z407 3707 aa16.34■□□□□ 0.21
SMARCD3-203ENST00000392811 DEFB105AQ8NG35 78 aa16.34■□□□□ 0.21
SMARCD3-203ENST00000392811 C16orf90A8MZG2 172 aa16.33■□□□□ 0.2
SMARCD3-203ENST00000392811 Q8N377 158 aa16.33■□□□□ 0.2
SMARCD3-203ENST00000392811 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.31■□□□□ 0.2
SMARCD3-203ENST00000392811 IGKV2-24A0A0C4DH68 120 aa16.31■□□□□ 0.2
SMARCD3-203ENST00000392811 LINC01547P58512 204 aaPredicted RBP16.31■□□□□ 0.2
SMARCD3-203ENST00000392811 C14orf177Q52M58 125 aa16.3■□□□□ 0.2
SMARCD3-203ENST00000392811 Q6ZVQ6 151 aa16.29■□□□□ 0.2
SMARCD3-203ENST00000392811 NBDYA0A0U1RRE5 68 aa16.29■□□□□ 0.2
SMARCD3-203ENST00000392811 TENM2Q9NT68 2774 aa16.28■□□□□ 0.2
SMARCD3-203ENST00000392811 PLECQ15149 4684 aaKnown RBP16.28■□□□□ 0.2
SMARCD3-203ENST00000392811 DNAH7Q8WXX0 4024 aa16.27■□□□□ 0.2
SMARCD3-203ENST00000392811 REG3GQ6UW15 175 aa16.27■□□□□ 0.2
SMARCD3-203ENST00000392811 A0A1W2PNN7 141 aa16.26■□□□□ 0.19
SMARCD3-203ENST00000392811 ATOX1O00244 68 aa16.26■□□□□ 0.19
SMARCD3-203ENST00000392811 FAM19A1Q7Z5A9 133 aa16.26■□□□□ 0.19
SMARCD3-203ENST00000392811 ST20-AS1Q8NBB2 130 aa16.24■□□□□ 0.19
SMARCD3-203ENST00000392811 LRCOL1A6NCL2 159 aa16.23■□□□□ 0.19
SMARCD3-203ENST00000392811 ERC2-IT1O76042 136 aa16.23■□□□□ 0.19
SMARCD3-203ENST00000392811 HAMPP81172 84 aa16.23■□□□□ 0.19
SMARCD3-203ENST00000392811 UBE2BP63146 152 aa16.22■□□□□ 0.19
SMARCD3-203ENST00000392811 C3orf22Q8N5N4 141 aa16.21■□□□□ 0.19
SMARCD3-203ENST00000392811 IGLV5-48A0A075B6I7 105 aa16.2■□□□□ 0.18
SMARCD3-203ENST00000392811 Q6ZRN7 208 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-203ENST00000392811 CHTF8P0CG12 524 aa16.18■□□□□ 0.18
SMARCD3-203ENST00000392811 UQCRQO14949 82 aa16.16■□□□□ 0.18
SMARCD3-203ENST00000392811 C9orf163Q8N9P6 203 aa16.16■□□□□ 0.18
SMARCD3-203ENST00000392811 PRKDCP78527 4128 aaKnown RBP16.16■□□□□ 0.18
SMARCD3-203ENST00000392811 COX7CP15954 63 aa16.14■□□□□ 0.17
SMARCD3-203ENST00000392811 CXCL6P80162 114 aa16.14■□□□□ 0.17
SMARCD3-203ENST00000392811 TNP2Q05952 138 aa16.13■□□□□ 0.17
SMARCD3-203ENST00000392811 STARD9Q9P2P6 4700 aa16.12■□□□□ 0.17
SMARCD3-203ENST00000392811 PRLHP81277 87 aa16.1■□□□□ 0.17
SMARCD3-203ENST00000392811 PHF5AQ7RTV0 110 aaKnown RBP16.1■□□□□ 0.17
SMARCD3-203ENST00000392811 C9orf153Q5TBE3 101 aa16.09■□□□□ 0.17
SMARCD3-203ENST00000392811 SS18L2Q9UHA2 77 aa16.09■□□□□ 0.17
SMARCD3-203ENST00000392811 SCXQ7RTU7 201 aa16.09■□□□□ 0.17
SMARCD3-203ENST00000392811 VPS13DQ5THJ4 4388 aa16.08■□□□□ 0.16
SMARCD3-203ENST00000392811 KRTAP11-1Q8IUC1 163 aa16.07■□□□□ 0.16
SMARCD3-203ENST00000392811 SERP2Q8N6R1 65 aa16.07■□□□□ 0.16
SMARCD3-203ENST00000392811 MEGF8Q7Z7M0 2845 aa16.07■□□□□ 0.16
SMARCD3-203ENST00000392811 C3orf84H3BNL1 204 aa16.07■□□□□ 0.16
SMARCD3-203ENST00000392811 C1orf137Q5JT78 98 aa16.06■□□□□ 0.16
SMARCD3-203ENST00000392811 PKIGQ9Y2B9 76 aa16.06■□□□□ 0.16
SMARCD3-203ENST00000392811 A0A1W2PNM2 257 aa16.04■□□□□ 0.16
SMARCD3-203ENST00000392811 SMIM29Q86T20 159 aa16.04■□□□□ 0.16
SMARCD3-203ENST00000392811 NREPQ16612 68 aa16.03■□□□□ 0.16
SMARCD3-203ENST00000392811 FUSP35637 526 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCD3-203ENST00000392811 HIGD2AQ9BW72 106 aa16.02■□□□□ 0.15
SMARCD3-203ENST00000392811 PANO1I0J062 215 aa16.01■□□□□ 0.15
SMARCD3-203ENST00000392811 LINC00474Q9P2X8 69 aa16.01■□□□□ 0.15
SMARCD3-203ENST00000392811 Q8NBF4 154 aa15.99■□□□□ 0.15
SMARCD3-203ENST00000392811 DNHD1Q96M86 4753 aa15.98■□□□□ 0.15
SMARCD3-203ENST00000392811 CRYGAP11844 174 aa15.98■□□□□ 0.15
SMARCD3-203ENST00000392811 A0A1B0GW54 56 aa15.97■□□□□ 0.15
SMARCD3-203ENST00000392811 A0A087WTM6 91 aa15.96■□□□□ 0.15
SMARCD3-203ENST00000392811 EPM2AB3EWF7 344 aa15.95■□□□□ 0.14
SMARCD3-203ENST00000392811 F8WEM9 126 aa15.94■□□□□ 0.14
SMARCD3-203ENST00000392811 LINC00476Q8WZB0 136 aa15.94■□□□□ 0.14
SMARCD3-203ENST00000392811 H0Y9J4 135 aa15.94■□□□□ 0.14
SMARCD3-203ENST00000392811 SPRR4Q96PI1 79 aa15.94■□□□□ 0.14
SMARCD3-203ENST00000392811 Q6ZR54 194 aa15.92■□□□□ 0.14
SMARCD3-203ENST00000392811 DPH3Q96FX2 82 aa15.92■□□□□ 0.14
SMARCD3-203ENST00000392811 Q8N9L7 120 aa15.92■□□□□ 0.14
SMARCD3-203ENST00000392811 BPY2O14599 106 aa15.91■□□□□ 0.14
SMARCD3-203ENST00000392811 BCE1O60756 84 aa15.91■□□□□ 0.14
SMARCD3-203ENST00000392811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-203ENST00000392811 SPACA4Q8TDM5 124 aa15.9■□□□□ 0.14
SMARCD3-203ENST00000392811 CYSTM1Q9H1C7 97 aa15.89■□□□□ 0.13
SMARCD3-203ENST00000392811 A0A0G2JQZ4 141 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms