RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TCTAP57738 103 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC58Q4VC31 144 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 KCNRGQ8N5I3 272 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 ANP32BQ92688 251 aaKnown RBP-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 LINC00474Q9P2X8 69 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 PRO1854Q9UHT4 67 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 ARL2BPQ9Y2Y0 163 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 DNAH12Q6ZR08 3092 aa-1.22□□□□□ -2.61
TRAJ28-201ENST00000390509 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 CD163L1Q9NR16 1453 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 MRC2Q9UBG0 1479 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 LRRC7Q96NW7 1537 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 FAM135AQ9P2D6 1515 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 CENPFP49454 3210 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 ERICH2A1L162 156 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 TMEM218A2RU14 115 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 MIF4GDA9UHW6 222 aaKnown RBP-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 M0QX08 132 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 SCTP09683 121 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 GNG11P61952 73 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 LSM6P62312 80 aaKnown RBP-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 TPM4P67936 248 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 MINOS1Q5TGZ0 78 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 ALKAL2Q6UX46 152 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 TCEAL4Q96EI5 215 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 PPP3R2Q96LZ3 170 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 BOLA2Q9H3K6 86 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 ANKRD36BQ8N2N9 1353 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 LY75O60449 1722 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 POLR1AO95602 1720 aaPredicted RBP-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 CRYBG1Q9Y4K1 1723 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 OVOS2A0A0G2JMS6 1433 aa-1.23□□□□□ -2.61
TRAJ28-201ENST00000390509 ASPMQ8IZT6 3477 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 TRAV21A0A0B4J279 112 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 A0A1W2PRE2 83 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CRYM-AS1A6NIL9 109 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 TMEM262E9PQX1 116 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 YKT6O15498 198 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 TSPAN19P0C672 248 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 GUCA1AP43080 201 aaPredicted RBP-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 GNG3P63215 75 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CCL7P80098 99 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 TFAMQ00059 246 aaKnown RBP-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 Q0VG73 95 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 ACBD7Q8N6N7 88 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 TMEM35BQ8NCS4 154 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 C1orf54Q8WWF1 131 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CGREF1Q99674 301 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 SIKE1Q9BRV8 207 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 RERGLQ9H628 205 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 GSKIPQ9P0R6 139 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CROCC2H7BZ55 1655 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CUL7Q14999 1698 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 CPSF1Q10570 1443 aaKnown RBP-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 SCAPERQ9BY12 1400 aa-1.24□□□□□ -2.61
TRAJ28-201ENST00000390509 ZFYVE16Q7Z3T8 1539 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 ADGBQ8N7X0 1667 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 ARAP2Q8WZ64 1704 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 IQCF6A8MYZ5 107 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 D6R8Y8 96 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 SFTA3P0C7M3 94 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 FCER1GP30273 86 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 HMGN3Q15651 99 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 MUSTN1Q8IVN3 82 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 C8orf59Q8N0T1 100 aaPredicted RBP-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 SMIM20Q8N5G0 67 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 COPS9Q8WXC6 57 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 PRAP1Q96NZ9 151 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 HIGD1AQ9Y241 93 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 GINS2Q9Y248 185 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 BTAF1O14981 1849 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 EIF4G3O43432 1585 aaKnown RBP-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 KDM5CP41229 1560 aa-1.25□□□□□ -2.61
TRAJ28-201ENST00000390509 CAMSAP1Q5T5Y3 1602 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 PKD1L3Q7Z443 1732 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 NWD2Q9ULI1 1742 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 NUP210LQ5VU65 1888 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 BRCA2P51587 3418 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 MYH1P12882 1939 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 TRBV25-1A0A075B6N4 114 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 DEFB131BA0A096LNP1 70 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 A0A1B0GUT8 65 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 NAP1L6A6NFF2 107 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 MRPL33O75394 65 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 S100A9P06702 114 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 TPM2P07951 284 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 TPM1P09493 284 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 IGLC6P0CF74 106 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 PMCHL1Q16048 86 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 LSM10Q969L4 123 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 CEP19Q96LK0 163 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 C20orf78Q9BR46 151 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 C6orf48Q9UBA6 75 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 CCNB3Q8WWL7 1395 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 THOC2Q8NI27 1593 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 KIF21BO75037 1637 aa-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 TARBP1Q13395 1621 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 PARP4Q9UKK3 1724 aaKnown RBP-1.26□□□□□ -2.61
TRAJ28-201ENST00000390509 ANKRD36CQ5JPF3 1778 aa-1.26□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms