RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 JMJD7-PLA2G4BH0Y9G9 81 aa11.74□□□□□ -0.53
ACTN4-202ENST00000390009 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
ACTN4-202ENST00000390009 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
ACTN4-202ENST00000390009 IGLV5-37A0A075B6J1 123 aa11.72□□□□□ -0.53
ACTN4-202ENST00000390009 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
ACTN4-202ENST00000390009 NBDYA0A0U1RRE5 68 aa11.71□□□□□ -0.53
ACTN4-202ENST00000390009 MEGF8Q7Z7M0 2845 aa11.71□□□□□ -0.53
ACTN4-202ENST00000390009 CNBPP62633 177 aaKnown RBP11.71□□□□□ -0.54
ACTN4-202ENST00000390009 KRTAP7-1Q8IUC3 87 aa11.71□□□□□ -0.54
ACTN4-202ENST00000390009 STARD9Q9P2P6 4700 aa11.7□□□□□ -0.54
ACTN4-202ENST00000390009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.7□□□□□ -0.54
ACTN4-202ENST00000390009 H3BQ85 93 aa11.68□□□□□ -0.54
ACTN4-202ENST00000390009 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
ACTN4-202ENST00000390009 C14orf177Q52M58 125 aa11.68□□□□□ -0.54
ACTN4-202ENST00000390009 FAM19A5Q7Z5A7 132 aaPredicted RBP11.68□□□□□ -0.54
ACTN4-202ENST00000390009 C3orf22Q8N5N4 141 aa11.67□□□□□ -0.54
ACTN4-202ENST00000390009 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
ACTN4-202ENST00000390009 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
ACTN4-202ENST00000390009 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-202ENST00000390009 CCKP06307 115 aa11.66□□□□□ -0.54
ACTN4-202ENST00000390009 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
ACTN4-202ENST00000390009 UQCRQO14949 82 aa11.65□□□□□ -0.54
ACTN4-202ENST00000390009 MRPL55Q7Z7F7 128 aaKnown RBP11.65□□□□□ -0.54
ACTN4-202ENST00000390009 A0A096LNI7 61 aa11.65□□□□□ -0.55
ACTN4-202ENST00000390009 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
ACTN4-202ENST00000390009 PRYO14603 147 aa11.64□□□□□ -0.55
ACTN4-202ENST00000390009 GHRHP01286 108 aa11.64□□□□□ -0.55
ACTN4-202ENST00000390009 RBM3P98179 157 aaKnown RBP11.64□□□□□ -0.55
ACTN4-202ENST00000390009 LRCOL1A6NCL2 159 aa11.63□□□□□ -0.55
ACTN4-202ENST00000390009 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
ACTN4-202ENST00000390009 Q6ZRN7 208 aaPredicted RBP11.62□□□□□ -0.55
ACTN4-202ENST00000390009 LINC00846Q9NV44 126 aa11.62□□□□□ -0.55
ACTN4-202ENST00000390009 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
ACTN4-202ENST00000390009 KRTAP4-16G5E9R7 235 aaPredicted RBP11.61□□□□□ -0.55
ACTN4-202ENST00000390009 SPRR1AP35321 89 aa11.61□□□□□ -0.55
ACTN4-202ENST00000390009 Q6ZRX8 168 aa11.6□□□□□ -0.55
ACTN4-202ENST00000390009 HIST1H4AP62805 103 aaKnown RBP11.59□□□□□ -0.55
ACTN4-202ENST00000390009 M0R2N4 97 aa11.59□□□□□ -0.55
ACTN4-202ENST00000390009 Q6ZQT0 140 aa11.59□□□□□ -0.55
ACTN4-202ENST00000390009 LOC110117498A0A087WWA1 95 aa11.58□□□□□ -0.56
ACTN4-202ENST00000390009 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.56
ACTN4-202ENST00000390009 COX7CP15954 63 aa11.58□□□□□ -0.56
ACTN4-202ENST00000390009 DSCR8Q96T75 97 aa11.57□□□□□ -0.56
ACTN4-202ENST00000390009 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
ACTN4-202ENST00000390009 DHRS4-AS1Q9P1J3 65 aa11.57□□□□□ -0.56
ACTN4-202ENST00000390009 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
ACTN4-202ENST00000390009 ATOX1O00244 68 aa11.56□□□□□ -0.56
ACTN4-202ENST00000390009 Q9BRP9 147 aa11.56□□□□□ -0.56
ACTN4-202ENST00000390009 REG3GQ6UW15 175 aa11.54□□□□□ -0.56
ACTN4-202ENST00000390009 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
ACTN4-202ENST00000390009 CRYGAP11844 174 aa11.53□□□□□ -0.56
ACTN4-202ENST00000390009 PDE6GP18545 87 aa11.53□□□□□ -0.56
ACTN4-202ENST00000390009 KRTAP21-3Q3LHN1 58 aa11.53□□□□□ -0.56
ACTN4-202ENST00000390009 TRBV7-4A0A0J9YYF1 115 aa11.51□□□□□ -0.57
ACTN4-202ENST00000390009 Q6JHZ5 121 aa11.51□□□□□ -0.57
ACTN4-202ENST00000390009 DEFB105AQ8NG35 78 aa11.51□□□□□ -0.57
ACTN4-202ENST00000390009 Q8N377 158 aa11.5□□□□□ -0.57
ACTN4-202ENST00000390009 PKIGQ9Y2B9 76 aa11.5□□□□□ -0.57
ACTN4-202ENST00000390009 IGKV3D-7A0A0C4DH55 119 aa11.5□□□□□ -0.57
ACTN4-202ENST00000390009 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
ACTN4-202ENST00000390009 Q6ZR54 194 aa11.48□□□□□ -0.57
ACTN4-202ENST00000390009 UBE2BP63146 152 aa11.48□□□□□ -0.57
ACTN4-202ENST00000390009 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
ACTN4-202ENST00000390009 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
ACTN4-202ENST00000390009 J3KT08 172 aa11.47□□□□□ -0.57
ACTN4-202ENST00000390009 A0A087WTM6 91 aa11.46□□□□□ -0.57
ACTN4-202ENST00000390009 A0A087WVE0 104 aa11.46□□□□□ -0.57
ACTN4-202ENST00000390009 ERC2-IT1O76042 136 aa11.46□□□□□ -0.57
ACTN4-202ENST00000390009 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.57
ACTN4-202ENST00000390009 UBL5Q9BZL1 73 aa11.46□□□□□ -0.57
ACTN4-202ENST00000390009 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
ACTN4-202ENST00000390009 CYSTM1Q9H1C7 97 aa11.45□□□□□ -0.58
ACTN4-202ENST00000390009 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
ACTN4-202ENST00000390009 IGLV5-48A0A075B6I7 105 aa11.44□□□□□ -0.58
ACTN4-202ENST00000390009 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
ACTN4-202ENST00000390009 SERP2Q8N6R1 65 aa11.43□□□□□ -0.58
ACTN4-202ENST00000390009 PANO1I0J062 215 aa11.42□□□□□ -0.58
ACTN4-202ENST00000390009 PRLHP81277 87 aa11.42□□□□□ -0.58
ACTN4-202ENST00000390009 KRTAP11-1Q8IUC1 163 aa11.42□□□□□ -0.58
ACTN4-202ENST00000390009 ATP5EP2Q5VTU8 51 aa11.4□□□□□ -0.58
ACTN4-202ENST00000390009 TGP01266 2768 aa11.4□□□□□ -0.58
ACTN4-202ENST00000390009 DNAH2Q9P225 4427 aa11.4□□□□□ -0.58
ACTN4-202ENST00000390009 RPS28P62857 69 aaKnown RBP11.39□□□□□ -0.59
ACTN4-202ENST00000390009 LY6G6CO95867 125 aa11.38□□□□□ -0.59
ACTN4-202ENST00000390009 TMEM258P61165 79 aa11.38□□□□□ -0.59
ACTN4-202ENST00000390009 Q6ZVQ6 151 aa11.38□□□□□ -0.59
ACTN4-202ENST00000390009 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
ACTN4-202ENST00000390009 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
ACTN4-202ENST00000390009 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
ACTN4-202ENST00000390009 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
ACTN4-202ENST00000390009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
ACTN4-202ENST00000390009 TNP2Q05952 138 aa11.36□□□□□ -0.59
ACTN4-202ENST00000390009 RTL8CO15255 209 aa11.36□□□□□ -0.59
ACTN4-202ENST00000390009 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
ACTN4-202ENST00000390009 WWC2-AS2Q96NR7 200 aa11.35□□□□□ -0.59
ACTN4-202ENST00000390009 HECTD4Q9Y4D8 3996 aa11.34□□□□□ -0.59
ACTN4-202ENST00000390009 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
ACTN4-202ENST00000390009 H0Y9J4 135 aa11.32□□□□□ -0.6
ACTN4-202ENST00000390009 HAMPP81172 84 aa11.32□□□□□ -0.6
ACTN4-202ENST00000390009 SMIM29Q86T20 159 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms