RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SPRR1AP35321 89 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 MAP1LC3CQ9BXW4 147 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 KCNQ1DNQ9H478 68 aa5.15□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BKO60814 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BJP06899 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BOP23527 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BBP33778 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BDP58876 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 LINC00310P59036 64 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BCP62807 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST2H2BEQ16778 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.14□□□□□ -1.59
IFT88-203ENST00000389373 BOD1L2Q8IYS8 172 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BHQ93079 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BNQ99877 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 HIST1H2BMQ99879 126 aa5.14□□□□□ -1.59
IFT88-203ENST00000389373 TRBV10-3A0A0K0K1G6 114 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 B5MCH6 92 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 FABP4P15090 132 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 HERVK_113P61574 105 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 S100A12P80511 92 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 LIMD2Q9BT23 127 aa5.13□□□□□ -1.59
IFT88-203ENST00000389373 TMEM223A0PJW6 202 aa5.12□□□□□ -1.59
IFT88-203ENST00000389373 DPM2O94777 84 aa5.12□□□□□ -1.59
IFT88-203ENST00000389373 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
IFT88-203ENST00000389373 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 LINC00587B1AMM8 73 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 CFC1P0CG37 223 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 SMIM13P0DJ93 91 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 HERV-K104P63124 156 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 Q9BRP9 147 aa5.11□□□□□ -1.59
IFT88-203ENST00000389373 IGKCP01834 107 aa5.1□□□□□ -1.59
IFT88-203ENST00000389373 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
IFT88-203ENST00000389373 COA6Q5JTJ3 125 aaKnown RBP5.1□□□□□ -1.59
IFT88-203ENST00000389373 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
IFT88-203ENST00000389373 MYMXA0A1B0GTQ4 84 aa5.09□□□□□ -1.59
IFT88-203ENST00000389373 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
IFT88-203ENST00000389373 C20orf202A1L168 122 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 SYS1-DBNDD2H3BUS1 97 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 NMUP48645 174 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 AKR1D1P51857 326 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 PET117Q6UWS5 81 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 MIR7-3HGQ8N6C7 128 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 ST20-AS1Q8NBB2 130 aa5.08□□□□□ -1.6
IFT88-203ENST00000389373 LEPROTO15243 131 aa5.07□□□□□ -1.6
IFT88-203ENST00000389373 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
IFT88-203ENST00000389373 DDTP30046 118 aa5.07□□□□□ -1.6
IFT88-203ENST00000389373 Q6ZRX8 168 aa5.07□□□□□ -1.6
IFT88-203ENST00000389373 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
IFT88-203ENST00000389373 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
IFT88-203ENST00000389373 H7C2G1 150 aa5.06□□□□□ -1.6
IFT88-203ENST00000389373 J3QQQ9 107 aa5.06□□□□□ -1.6
IFT88-203ENST00000389373 LINC01545Q5VT33 79 aa5.06□□□□□ -1.6
IFT88-203ENST00000389373 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
IFT88-203ENST00000389373 FCGBPQ9Y6R7 5405 aaPredicted RBP5.06□□□□□ -1.6
IFT88-203ENST00000389373 E9PLD3 99 aa5.05□□□□□ -1.6
IFT88-203ENST00000389373 S100A6P06703 90 aa5.05□□□□□ -1.6
IFT88-203ENST00000389373 S100A2P29034 98 aa5.05□□□□□ -1.6
IFT88-203ENST00000389373 KRTDAPP60985 99 aa5.05□□□□□ -1.6
IFT88-203ENST00000389373 JOSD1Q15040 202 aaPredicted RBP5.05□□□□□ -1.6
IFT88-203ENST00000389373 USH2AO75445 5202 aa5.05□□□□□ -1.6
IFT88-203ENST00000389373 MIEN1Q9BRT3 115 aa5.04□□□□□ -1.6
IFT88-203ENST00000389373 C3orf79P0CE67 100 aa5.03□□□□□ -1.6
IFT88-203ENST00000389373 S100A7L2Q5SY68 101 aa5.03□□□□□ -1.6
IFT88-203ENST00000389373 TSPEAR-AS2P59090 65 aa5.02□□□□□ -1.61
IFT88-203ENST00000389373 LAMTOR3Q9UHA4 124 aa5.02□□□□□ -1.61
IFT88-203ENST00000389373 LOC107984156A0A0G2JMH3 177 aa5.01□□□□□ -1.61
IFT88-203ENST00000389373 C1orf195Q5TG92 126 aa5.01□□□□□ -1.61
IFT88-203ENST00000389373 SLC25A34Q6PIV7 304 aa5.01□□□□□ -1.61
IFT88-203ENST00000389373 ARL17AQ8IVW1 177 aa5.01□□□□□ -1.61
IFT88-203ENST00000389373 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
IFT88-203ENST00000389373 SNRPEP62304 92 aaKnown RBP5□□□□□ -1.61
IFT88-203ENST00000389373 HIST3H2BBQ8N257 126 aa5□□□□□ -1.61
IFT88-203ENST00000389373 A0A0J9YXY3 114 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 ZNF815PA8K554 130 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 HSBP1L1C9JCN9 74 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 Q1RN00 199 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 HIST1H2BLQ99880 126 aa4.99□□□□□ -1.61
IFT88-203ENST00000389373 ZNF73O43830 326 aaPredicted RBP4.98□□□□□ -1.61
IFT88-203ENST00000389373 TIMM17BO60830 172 aa4.98□□□□□ -1.61
IFT88-203ENST00000389373 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
IFT88-203ENST00000389373 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
IFT88-203ENST00000389373 COPS9Q8WXC6 57 aa4.98□□□□□ -1.61
IFT88-203ENST00000389373 PRO1933Q9H354 126 aa4.98□□□□□ -1.61
IFT88-203ENST00000389373 SPANXB1Q9NS25 103 aaPredicted RBP4.98□□□□□ -1.61
IFT88-203ENST00000389373 CBY1Q9Y3M2 126 aa4.98□□□□□ -1.61
IFT88-203ENST00000389373 C5orf52A6NGY3 159 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 NDUFC2O95298 119 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 SPRR1BP22528 89 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 CD164Q04900 197 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 DEFB105AQ8NG35 78 aa4.97□□□□□ -1.61
IFT88-203ENST00000389373 MT2AP02795 61 aa4.96□□□□□ -1.62
IFT88-203ENST00000389373 TAL2Q16559 108 aa4.96□□□□□ -1.62
IFT88-203ENST00000389373 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
IFT88-203ENST00000389373 ATOH7Q8N100 152 aa4.96□□□□□ -1.62
IFT88-203ENST00000389373 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms