RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 Q8NDZ9 215 aa9.48□□□□□ -0.89
CLCN4-201ENST00000380829 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 HAMPP81172 84 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
CLCN4-201ENST00000380829 LINC00588Q9Y4M8 146 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 TMEM256-PLSCR3K7ERE1 68 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
CLCN4-201ENST00000380829 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.89
CLCN4-201ENST00000380829 LINC01547P58512 204 aaPredicted RBP9.46□□□□□ -0.89
CLCN4-201ENST00000380829 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
CLCN4-201ENST00000380829 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
CLCN4-201ENST00000380829 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
CLCN4-201ENST00000380829 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
CLCN4-201ENST00000380829 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
CLCN4-201ENST00000380829 Q6ZQT0 140 aa9.44□□□□□ -0.9
CLCN4-201ENST00000380829 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
CLCN4-201ENST00000380829 GVQW2A0A096LPI5 108 aaPredicted RBP9.43□□□□□ -0.9
CLCN4-201ENST00000380829 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
CLCN4-201ENST00000380829 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
CLCN4-201ENST00000380829 Q6ZVQ6 151 aa9.43□□□□□ -0.9
CLCN4-201ENST00000380829 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
CLCN4-201ENST00000380829 Q6ZRU5 148 aa9.42□□□□□ -0.9
CLCN4-201ENST00000380829 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CLCN4-201ENST00000380829 C6orf99Q4VX62 202 aa9.41□□□□□ -0.9
CLCN4-201ENST00000380829 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
CLCN4-201ENST00000380829 LAMTOR3Q9UHA4 124 aa9.4□□□□□ -0.9
CLCN4-201ENST00000380829 LYSTQ99698 3801 aa9.4□□□□□ -0.9
CLCN4-201ENST00000380829 MUC7Q8TAX7 377 aa9.4□□□□□ -0.91
CLCN4-201ENST00000380829 FBN3Q75N90 2809 aa9.39□□□□□ -0.91
CLCN4-201ENST00000380829 DNAH1Q9P2D7 4330 aa9.38□□□□□ -0.91
CLCN4-201ENST00000380829 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
CLCN4-201ENST00000380829 BCE1O60756 84 aa9.37□□□□□ -0.91
CLCN4-201ENST00000380829 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
CLCN4-201ENST00000380829 B9D2Q9BPU9 175 aa9.35□□□□□ -0.91
CLCN4-201ENST00000380829 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
CLCN4-201ENST00000380829 LOC110117498A0A087WWA1 95 aa9.35□□□□□ -0.91
CLCN4-201ENST00000380829 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
CLCN4-201ENST00000380829 NREPQ16612 68 aa9.34□□□□□ -0.91
CLCN4-201ENST00000380829 LINC00575Q6W349 94 aa9.34□□□□□ -0.91
CLCN4-201ENST00000380829 Q6ZRP5 223 aa9.33□□□□□ -0.92
CLCN4-201ENST00000380829 IGLV6-57P01721 117 aa9.32□□□□□ -0.92
CLCN4-201ENST00000380829 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
CLCN4-201ENST00000380829 NDUFC1O43677 76 aa9.32□□□□□ -0.92
CLCN4-201ENST00000380829 CXCL6P80162 114 aa9.32□□□□□ -0.92
CLCN4-201ENST00000380829 Q6ZQY7 126 aa9.31□□□□□ -0.92
CLCN4-201ENST00000380829 Q8N9L7 120 aa9.31□□□□□ -0.92
CLCN4-201ENST00000380829 VPREB1P12018 145 aa9.3□□□□□ -0.92
CLCN4-201ENST00000380829 CSMD3Q7Z407 3707 aa9.3□□□□□ -0.92
CLCN4-201ENST00000380829 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
CLCN4-201ENST00000380829 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
CLCN4-201ENST00000380829 DNAH10Q8IVF4 4471 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 MEGF8Q7Z7M0 2845 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 BPY2O14599 106 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
CLCN4-201ENST00000380829 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
CLCN4-201ENST00000380829 DNAH7Q8WXX0 4024 aa9.26□□□□□ -0.93
CLCN4-201ENST00000380829 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
CLCN4-201ENST00000380829 M0R378 163 aa9.24□□□□□ -0.93
CLCN4-201ENST00000380829 PRYO14603 147 aa9.24□□□□□ -0.93
CLCN4-201ENST00000380829 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
CLCN4-201ENST00000380829 ZNF73O43830 326 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-201ENST00000380829 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLCN4-201ENST00000380829 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
CLCN4-201ENST00000380829 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
CLCN4-201ENST00000380829 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
CLCN4-201ENST00000380829 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.93
CLCN4-201ENST00000380829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.21□□□□□ -0.93
CLCN4-201ENST00000380829 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
CLCN4-201ENST00000380829 NKAPP1Q8N9T2 125 aa9.2□□□□□ -0.94
CLCN4-201ENST00000380829 PSCAO43653 123 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 PDE6GP18545 87 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 COX7BP24311 80 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
CLCN4-201ENST00000380829 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
CLCN4-201ENST00000380829 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
CLCN4-201ENST00000380829 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
CLCN4-201ENST00000380829 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
CLCN4-201ENST00000380829 PMAIP1Q13794 54 aa9.15□□□□□ -0.94
CLCN4-201ENST00000380829 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
CLCN4-201ENST00000380829 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.94
CLCN4-201ENST00000380829 TGP01266 2768 aa9.14□□□□□ -0.95
CLCN4-201ENST00000380829 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
CLCN4-201ENST00000380829 C3orf84H3BNL1 204 aa9.13□□□□□ -0.95
CLCN4-201ENST00000380829 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
CLCN4-201ENST00000380829 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
CLCN4-201ENST00000380829 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
CLCN4-201ENST00000380829 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
CLCN4-201ENST00000380829 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
CLCN4-201ENST00000380829 NBDYA0A0U1RRE5 68 aa9.11□□□□□ -0.95
CLCN4-201ENST00000380829 CD164Q04900 197 aa9.11□□□□□ -0.95
CLCN4-201ENST00000380829 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
CLCN4-201ENST00000380829 PSPHP1O15172 72 aa9.11□□□□□ -0.95
CLCN4-201ENST00000380829 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms