RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C14orf177Q52M58 125 aa14.96□□□□□ -0.01
VPS16-201ENST00000380443 STAB2Q8WWQ8 2551 aa14.95□□□□□ -0.02
VPS16-201ENST00000380443 PRYO14603 147 aa14.94□□□□□ -0.02
VPS16-201ENST00000380443 CNBPP62633 177 aaKnown RBP14.94□□□□□ -0.02
VPS16-201ENST00000380443 PSCAO43653 123 aa14.93□□□□□ -0.02
VPS16-201ENST00000380443 KRTAP1-5Q9BYS1 174 aa14.93□□□□□ -0.02
VPS16-201ENST00000380443 LINC00846Q9NV44 126 aa14.93□□□□□ -0.02
VPS16-201ENST00000380443 DYNC2H1Q8NCM8 4307 aaKnown RBP14.92□□□□□ -0.02
VPS16-201ENST00000380443 NDUFV3P56181 108 aaKnown RBP14.92□□□□□ -0.02
VPS16-201ENST00000380443 Q6JHZ5 121 aa14.92□□□□□ -0.02
VPS16-201ENST00000380443 DSCR8Q96T75 97 aa14.91□□□□□ -0.02
VPS16-201ENST00000380443 IGLV1-50A0A075B6I6 118 aa14.9□□□□□ -0.02
VPS16-201ENST00000380443 ANAPC13Q9BS18 74 aa14.9□□□□□ -0.02
VPS16-201ENST00000380443 Q6ZQT0 140 aa14.89□□□□□ -0.03
VPS16-201ENST00000380443 DHRS4-AS1Q9P1J3 65 aa14.89□□□□□ -0.03
VPS16-201ENST00000380443 C3orf84H3BNL1 204 aa14.87□□□□□ -0.03
VPS16-201ENST00000380443 SPRR1AP35321 89 aa14.87□□□□□ -0.03
VPS16-201ENST00000380443 PKIGQ9Y2B9 76 aa14.87□□□□□ -0.03
VPS16-201ENST00000380443 MRPL55Q7Z7F7 128 aaKnown RBP14.86□□□□□ -0.03
VPS16-201ENST00000380443 C16orf90A8MZG2 172 aa14.85□□□□□ -0.03
VPS16-201ENST00000380443 ATP5EP2Q5VTU8 51 aa14.85□□□□□ -0.03
VPS16-201ENST00000380443 FAM168BA1KXE4 195 aa14.83□□□□□ -0.04
VPS16-201ENST00000380443 KRTAP4-16G5E9R7 235 aaPredicted RBP14.83□□□□□ -0.04
VPS16-201ENST00000380443 NBDYA0A0U1RRE5 68 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 Q6ZRX8 168 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 ETDCA0A1B0GVM5 59 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 B5MCH6 92 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 KRTAP7-1Q8IUC3 87 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 UBL5Q9BZL1 73 aa14.82□□□□□ -0.04
VPS16-201ENST00000380443 TRBV7-4A0A0J9YYF1 115 aa14.81□□□□□ -0.04
VPS16-201ENST00000380443 DNAH7Q8WXX0 4024 aa14.8□□□□□ -0.04
VPS16-201ENST00000380443 RPL37AP8A6NKH3 93 aa14.79□□□□□ -0.04
VPS16-201ENST00000380443 FAM19A5Q7Z5A7 132 aaPredicted RBP14.79□□□□□ -0.04
VPS16-201ENST00000380443 A0A096LNI7 61 aa14.75□□□□□ -0.05
VPS16-201ENST00000380443 FAM236AA0A1B0GUQ0 79 aa14.75□□□□□ -0.05
VPS16-201ENST00000380443 FAM236BA0A1B0GV22 79 aa14.75□□□□□ -0.05
VPS16-201ENST00000380443 REG3GQ6UW15 175 aa14.73□□□□□ -0.05
VPS16-201ENST00000380443 IGKV3D-7A0A0C4DH55 119 aa14.72□□□□□ -0.05
VPS16-201ENST00000380443 LRCOL1A6NCL2 159 aa14.72□□□□□ -0.05
VPS16-201ENST00000380443 C9orf163Q8N9P6 203 aa14.71□□□□□ -0.06
VPS16-201ENST00000380443 Q9BRP9 147 aa14.71□□□□□ -0.06
VPS16-201ENST00000380443 Q8N377 158 aa14.7□□□□□ -0.06
VPS16-201ENST00000380443 HIST1H4AP62805 103 aaKnown RBP14.69□□□□□ -0.06
VPS16-201ENST00000380443 IGLV5-48A0A075B6I7 105 aa14.69□□□□□ -0.06
VPS16-201ENST00000380443 Q6ZRN7 208 aaPredicted RBP14.69□□□□□ -0.06
VPS16-201ENST00000380443 CSMD3Q7Z407 3707 aa14.68□□□□□ -0.06
VPS16-201ENST00000380443 LINC01547P58512 204 aaPredicted RBP14.68□□□□□ -0.06
VPS16-201ENST00000380443 LINC00474Q9P2X8 69 aa14.68□□□□□ -0.06
VPS16-201ENST00000380443 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.66□□□□□ -0.06
VPS16-201ENST00000380443 IGKV2-24A0A0C4DH68 120 aa14.66□□□□□ -0.06
VPS16-201ENST00000380443 A0A1W2PNN7 141 aa14.65□□□□□ -0.06
VPS16-201ENST00000380443 A0A1B0GW54 56 aa14.64□□□□□ -0.07
VPS16-201ENST00000380443 ATOX1O00244 68 aa14.64□□□□□ -0.07
VPS16-201ENST00000380443 UBE2BP63146 152 aa14.64□□□□□ -0.07
VPS16-201ENST00000380443 Q6ZVQ6 151 aa14.64□□□□□ -0.07
VPS16-201ENST00000380443 DEFB105AQ8NG35 78 aa14.64□□□□□ -0.07
VPS16-201ENST00000380443 M0R2N4 97 aa14.63□□□□□ -0.07
VPS16-201ENST00000380443 STARD9Q9P2P6 4700 aa14.63□□□□□ -0.07
VPS16-201ENST00000380443 CXCL6P80162 114 aa14.61□□□□□ -0.07
VPS16-201ENST00000380443 PLECQ15149 4684 aaKnown RBP14.58□□□□□ -0.08
VPS16-201ENST00000380443 TENM2Q9NT68 2774 aa14.57□□□□□ -0.08
VPS16-201ENST00000380443 TNP2Q05952 138 aa14.57□□□□□ -0.08
VPS16-201ENST00000380443 H0Y9J4 135 aa14.56□□□□□ -0.08
VPS16-201ENST00000380443 FAM19A1Q7Z5A9 133 aa14.55□□□□□ -0.08
VPS16-201ENST00000380443 CCDC179H3BU77 68 aa14.55□□□□□ -0.08
VPS16-201ENST00000380443 ERC2-IT1O76042 136 aa14.55□□□□□ -0.08
VPS16-201ENST00000380443 ST20-AS1Q8NBB2 130 aa14.55□□□□□ -0.08
VPS16-201ENST00000380443 HAMPP81172 84 aa14.54□□□□□ -0.08
VPS16-201ENST00000380443 VPS13DQ5THJ4 4388 aa14.53□□□□□ -0.08
VPS16-201ENST00000380443 DNAH10Q8IVF4 4471 aa14.53□□□□□ -0.08
VPS16-201ENST00000380443 Q6ZR54 194 aa14.52□□□□□ -0.08
VPS16-201ENST00000380443 A0A087WVE0 104 aa14.52□□□□□ -0.09
VPS16-201ENST00000380443 CHTF8P0CG12 524 aa14.52□□□□□ -0.09
VPS16-201ENST00000380443 FUSP35637 526 aaKnown RBP eCLIP14.52□□□□□ -0.09
VPS16-201ENST00000380443 UQCRQO14949 82 aa14.51□□□□□ -0.09
VPS16-201ENST00000380443 A0A087WTM6 91 aa14.5□□□□□ -0.09
VPS16-201ENST00000380443 LYSTQ99698 3801 aa14.5□□□□□ -0.09
VPS16-201ENST00000380443 LCE6AA0A183 80 aa14.5□□□□□ -0.09
VPS16-201ENST00000380443 PHF5AQ7RTV0 110 aaKnown RBP14.5□□□□□ -0.09
VPS16-201ENST00000380443 BCE1O60756 84 aa14.49□□□□□ -0.09
VPS16-201ENST00000380443 C1orf137Q5JT78 98 aa14.49□□□□□ -0.09
VPS16-201ENST00000380443 C3orf22Q8N5N4 141 aa14.49□□□□□ -0.09
VPS16-201ENST00000380443 EPM2AB3EWF7 344 aa14.48□□□□□ -0.09
VPS16-201ENST00000380443 COX7CP15954 63 aa14.48□□□□□ -0.09
VPS16-201ENST00000380443 SS18L2Q9UHA2 77 aa14.48□□□□□ -0.09
VPS16-201ENST00000380443 F8WEM9 126 aa14.47□□□□□ -0.09
VPS16-201ENST00000380443 NREPQ16612 68 aa14.47□□□□□ -0.09
VPS16-201ENST00000380443 KMT2CQ8NEZ4 4911 aaKnown RBP14.46□□□□□ -0.09
VPS16-201ENST00000380443 LINC00476Q8WZB0 136 aa14.46□□□□□ -0.09
VPS16-201ENST00000380443 PRLHP81277 87 aa14.45□□□□□ -0.1
VPS16-201ENST00000380443 SMIM29Q86T20 159 aa14.45□□□□□ -0.1
VPS16-201ENST00000380443 LY6G6CO95867 125 aa14.45□□□□□ -0.1
VPS16-201ENST00000380443 Q8NBF4 154 aa14.45□□□□□ -0.1
VPS16-201ENST00000380443 SERP2Q8N6R1 65 aa14.43□□□□□ -0.1
VPS16-201ENST00000380443 SPACA4Q8TDM5 124 aa14.43□□□□□ -0.1
VPS16-201ENST00000380443 SPRR4Q96PI1 79 aa14.43□□□□□ -0.1
VPS16-201ENST00000380443 IGLV8-61A0A075B6I0 122 aa14.42□□□□□ -0.1
VPS16-201ENST00000380443 HIGD2AQ9BW72 106 aa14.42□□□□□ -0.1
VPS16-201ENST00000380443 A0A1W2PNM2 257 aa14.41□□□□□ -0.1
VPS16-201ENST00000380443 SPRR1BP22528 89 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms