RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
CDKN2A-202ENST00000380150 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
CDKN2A-202ENST00000380150 KRTAP4-16G5E9R7 235 aaPredicted RBP11.48□□□□□ -0.57
CDKN2A-202ENST00000380150 NPC2P61916 151 aa11.48□□□□□ -0.57
CDKN2A-202ENST00000380150 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
CDKN2A-202ENST00000380150 IGLV6-57P01721 117 aa11.46□□□□□ -0.57
CDKN2A-202ENST00000380150 LITAFQ99732 161 aa11.46□□□□□ -0.57
CDKN2A-202ENST00000380150 KRTAP9-6A0A140TA67 174 aa11.45□□□□□ -0.58
CDKN2A-202ENST00000380150 CTAG1AP78358 180 aa11.45□□□□□ -0.58
CDKN2A-202ENST00000380150 SPANXCQ9NY87 97 aa11.45□□□□□ -0.58
CDKN2A-202ENST00000380150 CBY1Q9Y3M2 126 aa11.45□□□□□ -0.58
CDKN2A-202ENST00000380150 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
CDKN2A-202ENST00000380150 TRAV23DV6A0A075B6W5 121 aa11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 B5MCH6 92 aa11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 S100A2P29034 98 aa11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 SMCR5Q8TEV8 140 aa11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 TTTY13Q9BZ97 58 aa11.43□□□□□ -0.58
CDKN2A-202ENST00000380150 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
CDKN2A-202ENST00000380150 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
CDKN2A-202ENST00000380150 Q6ZRX8 168 aa11.41□□□□□ -0.58
CDKN2A-202ENST00000380150 Q8NBF4 154 aa11.41□□□□□ -0.58
CDKN2A-202ENST00000380150 S100A6P06703 90 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 SNRPEP62304 92 aaKnown RBP11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 KRTAP13-3Q3SY46 172 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 HIST3H2BBQ8N257 126 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 KRTAP4-1Q9BYQ7 146 aa11.4□□□□□ -0.58
CDKN2A-202ENST00000380150 COPS9Q8WXC6 57 aa11.39□□□□□ -0.59
CDKN2A-202ENST00000380150 ZNF73O43830 326 aaPredicted RBP11.38□□□□□ -0.59
CDKN2A-202ENST00000380150 HINT1P49773 126 aaPredicted RBP11.38□□□□□ -0.59
CDKN2A-202ENST00000380150 HIST1H2BLQ99880 126 aa11.38□□□□□ -0.59
CDKN2A-202ENST00000380150 SPANXDQ9BXN6 97 aa11.38□□□□□ -0.59
CDKN2A-202ENST00000380150 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
CDKN2A-202ENST00000380150 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
CDKN2A-202ENST00000380150 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
CDKN2A-202ENST00000380150 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
CDKN2A-202ENST00000380150 LINC00483Q53H64 154 aa11.35□□□□□ -0.59
CDKN2A-202ENST00000380150 Q6ZVH6 145 aa11.35□□□□□ -0.59
CDKN2A-202ENST00000380150 Q9BRP9 147 aa11.35□□□□□ -0.59
CDKN2A-202ENST00000380150 IFITM1P13164 125 aa11.33□□□□□ -0.6
CDKN2A-202ENST00000380150 ASB16-AS1Q495Z4 193 aa11.33□□□□□ -0.6
CDKN2A-202ENST00000380150 GAGE2AQ6NT46 116 aa11.33□□□□□ -0.6
CDKN2A-202ENST00000380150 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
CDKN2A-202ENST00000380150 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
CDKN2A-202ENST00000380150 HSBP1L1C9JCN9 74 aa11.31□□□□□ -0.6
CDKN2A-202ENST00000380150 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
CDKN2A-202ENST00000380150 SPINK1P00995 79 aa11.28□□□□□ -0.6
CDKN2A-202ENST00000380150 IGLV9-49A0A0B4J1Y8 123 aa11.27□□□□□ -0.61
CDKN2A-202ENST00000380150 MOBPQ13875 183 aa11.27□□□□□ -0.61
CDKN2A-202ENST00000380150 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
CDKN2A-202ENST00000380150 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
CDKN2A-202ENST00000380150 Q8N377 158 aa11.25□□□□□ -0.61
CDKN2A-202ENST00000380150 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
CDKN2A-202ENST00000380150 SSBP3-AS1Q7Z2R9 100 aa11.23□□□□□ -0.61
CDKN2A-202ENST00000380150 A6NDN8 102 aa11.22□□□□□ -0.61
CDKN2A-202ENST00000380150 COX7BP24311 80 aa11.22□□□□□ -0.61
CDKN2A-202ENST00000380150 LINC01547P58512 204 aaPredicted RBP11.22□□□□□ -0.61
CDKN2A-202ENST00000380150 ELOF1P60002 83 aaKnown RBP11.22□□□□□ -0.61
CDKN2A-202ENST00000380150 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
CDKN2A-202ENST00000380150 SCGB1D1O95968 90 aa11.21□□□□□ -0.61
CDKN2A-202ENST00000380150 SEC61BP60468 96 aaKnown RBP11.21□□□□□ -0.61
CDKN2A-202ENST00000380150 TRAV13-2A0A0B4J235 113 aa11.2□□□□□ -0.62
CDKN2A-202ENST00000380150 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
CDKN2A-202ENST00000380150 SLC25A34Q6PIV7 304 aa11.19□□□□□ -0.62
CDKN2A-202ENST00000380150 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
CDKN2A-202ENST00000380150 FSIP2Q5CZC0 6907 aa11.17□□□□□ -0.62
CDKN2A-202ENST00000380150 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
CDKN2A-202ENST00000380150 SPRR1BP22528 89 aa11.16□□□□□ -0.62
CDKN2A-202ENST00000380150 RPS29P62273 56 aaKnown RBP11.16□□□□□ -0.62
CDKN2A-202ENST00000380150 XP32Q5T750 250 aa11.15□□□□□ -0.62
CDKN2A-202ENST00000380150 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
CDKN2A-202ENST00000380150 A4D1N5 150 aa11.14□□□□□ -0.63
CDKN2A-202ENST00000380150 SLC25A20O43772 301 aa11.13□□□□□ -0.63
CDKN2A-202ENST00000380150 LCE2CQ5TA81 110 aa11.13□□□□□ -0.63
CDKN2A-202ENST00000380150 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
CDKN2A-202ENST00000380150 COX8AP10176 69 aa11.11□□□□□ -0.63
CDKN2A-202ENST00000380150 TAL2Q16559 108 aa11.11□□□□□ -0.63
CDKN2A-202ENST00000380150 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
CDKN2A-202ENST00000380150 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
CDKN2A-202ENST00000380150 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
CDKN2A-202ENST00000380150 DLEU1O43261 78 aa11.09□□□□□ -0.63
CDKN2A-202ENST00000380150 KRTAP19-2Q3LHN2 52 aa11.08□□□□□ -0.64
CDKN2A-202ENST00000380150 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
CDKN2A-202ENST00000380150 VAMP3Q15836 100 aa11.07□□□□□ -0.64
CDKN2A-202ENST00000380150 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
CDKN2A-202ENST00000380150 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 Q1RN00 199 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 VAMP8Q9BV40 100 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 CRCT1Q9UGL9 99 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 PAM16Q9Y3D7 125 aa11.03□□□□□ -0.64
CDKN2A-202ENST00000380150 HRCT1Q6UXD1 115 aa11.02□□□□□ -0.65
CDKN2A-202ENST00000380150 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
CDKN2A-202ENST00000380150 PCOTHQ58A44 107 aa11□□□□□ -0.65
CDKN2A-202ENST00000380150 LIMD2Q9BT23 127 aa11□□□□□ -0.65
CDKN2A-202ENST00000380150 PRO1933Q9H354 126 aa11□□□□□ -0.65
CDKN2A-202ENST00000380150 HIGD1BQ9P298 99 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms