RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CRIP3Q6Q6R5 217 aa7.74□□□□□ -1.17
PTCHD1-201ENST00000379361 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
PTCHD1-201ENST00000379361 CHD9Q3L8U1 2897 aa7.74□□□□□ -1.17
PTCHD1-201ENST00000379361 COX8CQ7Z4L0 72 aa7.73□□□□□ -1.17
PTCHD1-201ENST00000379361 EP400Q96L91 3159 aa7.73□□□□□ -1.17
PTCHD1-201ENST00000379361 FAM19A4Q96LR4 140 aa7.73□□□□□ -1.17
PTCHD1-201ENST00000379361 LOC110117498A0A087WWA1 95 aa7.72□□□□□ -1.17
PTCHD1-201ENST00000379361 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
PTCHD1-201ENST00000379361 Q6ZQT0 140 aa7.72□□□□□ -1.17
PTCHD1-201ENST00000379361 ST20-AS1Q8NBB2 130 aa7.72□□□□□ -1.17
PTCHD1-201ENST00000379361 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
PTCHD1-201ENST00000379361 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.17
PTCHD1-201ENST00000379361 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.17
PTCHD1-201ENST00000379361 TRIOO75962 3097 aa7.71□□□□□ -1.17
PTCHD1-201ENST00000379361 LINC00483Q53H64 154 aa7.71□□□□□ -1.17
PTCHD1-201ENST00000379361 FRYLO94915 3013 aa7.71□□□□□ -1.18
PTCHD1-201ENST00000379361 UBR5O95071 2799 aaPredicted RBP7.7□□□□□ -1.18
PTCHD1-201ENST00000379361 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
PTCHD1-201ENST00000379361 CHD7Q9P2D1 2997 aa7.69□□□□□ -1.18
PTCHD1-201ENST00000379361 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
PTCHD1-201ENST00000379361 CDSNQ15517 529 aa7.68□□□□□ -1.18
PTCHD1-201ENST00000379361 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
PTCHD1-201ENST00000379361 COL4A2P08572 1712 aa7.68□□□□□ -1.18
PTCHD1-201ENST00000379361 IGHV3OR16-9A0A0B4J2B5 98 aa7.68□□□□□ -1.18
PTCHD1-201ENST00000379361 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
PTCHD1-201ENST00000379361 IGLV6-57P01721 117 aa7.67□□□□□ -1.18
PTCHD1-201ENST00000379361 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
PTCHD1-201ENST00000379361 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
PTCHD1-201ENST00000379361 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
PTCHD1-201ENST00000379361 LINC00588Q9Y4M8 146 aa7.66□□□□□ -1.18
PTCHD1-201ENST00000379361 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.18
PTCHD1-201ENST00000379361 CYP4F30PQ9H0H9 118 aa7.65□□□□□ -1.18
PTCHD1-201ENST00000379361 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
PTCHD1-201ENST00000379361 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.19
PTCHD1-201ENST00000379361 CRYBG3Q68DQ2 2970 aa7.64□□□□□ -1.19
PTCHD1-201ENST00000379361 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
PTCHD1-201ENST00000379361 FRYQ5TBA9 3013 aa7.64□□□□□ -1.19
PTCHD1-201ENST00000379361 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 ERC2-IT1O76042 136 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 COA5Q86WW8 74 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 PRO3102Q9H379 93 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 NF1P21359 2839 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
PTCHD1-201ENST00000379361 LINC00310P59036 64 aa7.62□□□□□ -1.19
PTCHD1-201ENST00000379361 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
PTCHD1-201ENST00000379361 K7EQZ3 153 aa7.6□□□□□ -1.19
PTCHD1-201ENST00000379361 CSNK1G2-AS1Q8NCQ2 148 aa7.59□□□□□ -1.19
PTCHD1-201ENST00000379361 M0R2T5 61 aa7.58□□□□□ -1.2
PTCHD1-201ENST00000379361 ITPR1Q14643 2758 aa7.58□□□□□ -1.2
PTCHD1-201ENST00000379361 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
PTCHD1-201ENST00000379361 Q8NAQ8 132 aa7.57□□□□□ -1.2
PTCHD1-201ENST00000379361 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
PTCHD1-201ENST00000379361 DSCR10P59022 87 aa7.57□□□□□ -1.2
PTCHD1-201ENST00000379361 CELSR2Q9HCU4 2923 aa7.57□□□□□ -1.2
PTCHD1-201ENST00000379361 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
PTCHD1-201ENST00000379361 A0A1B0GVX0 72 aa7.55□□□□□ -1.2
PTCHD1-201ENST00000379361 C5orf42Q9H799 3197 aa7.55□□□□□ -1.2
PTCHD1-201ENST00000379361 Q6ZSA8 131 aa7.55□□□□□ -1.2
PTCHD1-201ENST00000379361 ZNF861PO60384 105 aa7.55□□□□□ -1.2
PTCHD1-201ENST00000379361 MGAQ8IWI9 3026 aa7.54□□□□□ -1.2
PTCHD1-201ENST00000379361 HRES1P13985 223 aa7.54□□□□□ -1.2
PTCHD1-201ENST00000379361 A0A0D9SG42 100 aa7.54□□□□□ -1.2
PTCHD1-201ENST00000379361 LRBAP50851 2863 aa7.54□□□□□ -1.2
PTCHD1-201ENST00000379361 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
PTCHD1-201ENST00000379361 ASH1LQ9NR48 2969 aaKnown RBP7.53□□□□□ -1.2
PTCHD1-201ENST00000379361 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
PTCHD1-201ENST00000379361 C8orf17Q9NRJ1 99 aa7.52□□□□□ -1.21
PTCHD1-201ENST00000379361 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
PTCHD1-201ENST00000379361 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
PTCHD1-201ENST00000379361 TENM1Q9UKZ4 2725 aa7.5□□□□□ -1.21
PTCHD1-201ENST00000379361 A0A1W2PPR1 153 aa7.49□□□□□ -1.21
PTCHD1-201ENST00000379361 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
PTCHD1-201ENST00000379361 NIPBLQ6KC79 2804 aaeCLIP7.49□□□□□ -1.21
PTCHD1-201ENST00000379361 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
PTCHD1-201ENST00000379361 KALRNO60229 2985 aa7.49□□□□□ -1.21
PTCHD1-201ENST00000379361 A0A096LNJ9 63 aa7.48□□□□□ -1.21
PTCHD1-201ENST00000379361 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
PTCHD1-201ENST00000379361 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
PTCHD1-201ENST00000379361 Q1T7F1 81 aa7.46□□□□□ -1.21
PTCHD1-201ENST00000379361 DMXL2Q8TDJ6 3036 aa7.45□□□□□ -1.22
PTCHD1-201ENST00000379361 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
PTCHD1-201ENST00000379361 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
PTCHD1-201ENST00000379361 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
PTCHD1-201ENST00000379361 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
PTCHD1-201ENST00000379361 A0A087WTM6 91 aa7.43□□□□□ -1.22
PTCHD1-201ENST00000379361 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
PTCHD1-201ENST00000379361 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
PTCHD1-201ENST00000379361 A8MUN3 132 aa7.42□□□□□ -1.22
PTCHD1-201ENST00000379361 SPANXA2-OT1Q8N9U9 137 aa7.42□□□□□ -1.22
PTCHD1-201ENST00000379361 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
PTCHD1-201ENST00000379361 TNRC18O15417 2968 aaPredicted RBP7.41□□□□□ -1.22
PTCHD1-201ENST00000379361 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
PTCHD1-201ENST00000379361 K7EIL1 84 aa7.4□□□□□ -1.22
PTCHD1-201ENST00000379361 IGLV7-43P04211 117 aa7.4□□□□□ -1.23
PTCHD1-201ENST00000379361 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.23
PTCHD1-201ENST00000379361 CD164Q04900 197 aa7.38□□□□□ -1.23
PTCHD1-201ENST00000379361 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
PTCHD1-201ENST00000379361 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
PTCHD1-201ENST00000379361 IGLV7-46A0A075B6I9 117 aa7.37□□□□□ -1.23
PTCHD1-201ENST00000379361 A0A0A0MQY5 61 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms