RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TTC32Q5I0X7 151 aa6.85□□□□□ -1.31
POLR2J3-201ENST00000379340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.85□□□□□ -1.31
POLR2J3-201ENST00000379340 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
POLR2J3-201ENST00000379340 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
POLR2J3-201ENST00000379340 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
POLR2J3-201ENST00000379340 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
POLR2J3-201ENST00000379340 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
POLR2J3-201ENST00000379340 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
POLR2J3-201ENST00000379340 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
POLR2J3-201ENST00000379340 CCKP06307 115 aa6.82□□□□□ -1.32
POLR2J3-201ENST00000379340 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
POLR2J3-201ENST00000379340 LOC107984640A0A0U1RRK4 108 aa6.82□□□□□ -1.32
POLR2J3-201ENST00000379340 Q6ZQY7 126 aa6.81□□□□□ -1.32
POLR2J3-201ENST00000379340 SMCR5Q8TEV8 140 aa6.81□□□□□ -1.32
POLR2J3-201ENST00000379340 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
POLR2J3-201ENST00000379340 NUPR2A6NF83 97 aa6.8□□□□□ -1.32
POLR2J3-201ENST00000379340 PDE6GP18545 87 aa6.8□□□□□ -1.32
POLR2J3-201ENST00000379340 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
POLR2J3-201ENST00000379340 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
POLR2J3-201ENST00000379340 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 PRYO14603 147 aa6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 RBM3P98179 157 aaKnown RBP6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 C14orf177Q52M58 125 aa6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
POLR2J3-201ENST00000379340 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
POLR2J3-201ENST00000379340 Q6JHZ5 121 aa6.78□□□□□ -1.32
POLR2J3-201ENST00000379340 NDUFV3P56181 108 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-201ENST00000379340 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-201ENST00000379340 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
POLR2J3-201ENST00000379340 RYR1P21817 5038 aa6.77□□□□□ -1.33
POLR2J3-201ENST00000379340 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.33
POLR2J3-201ENST00000379340 PSCAO43653 123 aa6.77□□□□□ -1.33
POLR2J3-201ENST00000379340 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
POLR2J3-201ENST00000379340 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
POLR2J3-201ENST00000379340 ATP5EP2Q5VTU8 51 aa6.76□□□□□ -1.33
POLR2J3-201ENST00000379340 Q6ZQT0 140 aa6.76□□□□□ -1.33
POLR2J3-201ENST00000379340 DSCR8Q96T75 97 aa6.76□□□□□ -1.33
POLR2J3-201ENST00000379340 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
POLR2J3-201ENST00000379340 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
POLR2J3-201ENST00000379340 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
POLR2J3-201ENST00000379340 ALMS1Q8TCU4 4167 aa6.75□□□□□ -1.33
POLR2J3-201ENST00000379340 SPRR1AP35321 89 aa6.74□□□□□ -1.33
POLR2J3-201ENST00000379340 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
POLR2J3-201ENST00000379340 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
POLR2J3-201ENST00000379340 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
POLR2J3-201ENST00000379340 Q6ZRX8 168 aa6.73□□□□□ -1.33
POLR2J3-201ENST00000379340 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
POLR2J3-201ENST00000379340 TRBV7-4A0A0J9YYF1 115 aa6.72□□□□□ -1.33
POLR2J3-201ENST00000379340 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
POLR2J3-201ENST00000379340 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
POLR2J3-201ENST00000379340 B5MCH6 92 aa6.72□□□□□ -1.33
POLR2J3-201ENST00000379340 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
POLR2J3-201ENST00000379340 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
POLR2J3-201ENST00000379340 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
POLR2J3-201ENST00000379340 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
POLR2J3-201ENST00000379340 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
POLR2J3-201ENST00000379340 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
POLR2J3-201ENST00000379340 RPL37AP8A6NKH3 93 aa6.69□□□□□ -1.34
POLR2J3-201ENST00000379340 REG3GQ6UW15 175 aa6.69□□□□□ -1.34
POLR2J3-201ENST00000379340 A0A096LNI7 61 aa6.68□□□□□ -1.34
POLR2J3-201ENST00000379340 IGKV3D-7A0A0C4DH55 119 aa6.68□□□□□ -1.34
POLR2J3-201ENST00000379340 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
POLR2J3-201ENST00000379340 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
POLR2J3-201ENST00000379340 LINC00476Q8WZB0 136 aa6.67□□□□□ -1.34
POLR2J3-201ENST00000379340 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
POLR2J3-201ENST00000379340 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
POLR2J3-201ENST00000379340 C9orf163Q8N9P6 203 aa6.66□□□□□ -1.34
POLR2J3-201ENST00000379340 Q9BRP9 147 aa6.66□□□□□ -1.34
POLR2J3-201ENST00000379340 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
POLR2J3-201ENST00000379340 ATOX1O00244 68 aa6.65□□□□□ -1.34
POLR2J3-201ENST00000379340 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
POLR2J3-201ENST00000379340 Q8N377 158 aa6.65□□□□□ -1.34
POLR2J3-201ENST00000379340 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
POLR2J3-201ENST00000379340 A0A1B0GW54 56 aa6.65□□□□□ -1.35
POLR2J3-201ENST00000379340 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.35
POLR2J3-201ENST00000379340 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 LY6G6CO95867 125 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 UBE2BP63146 152 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 Q6ZVQ6 151 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 KMT2AQ03164 3969 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
POLR2J3-201ENST00000379340 M0R2N4 97 aa6.63□□□□□ -1.35
POLR2J3-201ENST00000379340 CXCL6P80162 114 aa6.63□□□□□ -1.35
POLR2J3-201ENST00000379340 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
POLR2J3-201ENST00000379340 DEFB105AQ8NG35 78 aa6.62□□□□□ -1.35
POLR2J3-201ENST00000379340 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
POLR2J3-201ENST00000379340 TNP2Q05952 138 aa6.61□□□□□ -1.35
POLR2J3-201ENST00000379340 FAM19A1Q7Z5A9 133 aa6.61□□□□□ -1.35
POLR2J3-201ENST00000379340 H0Y9J4 135 aa6.6□□□□□ -1.35
POLR2J3-201ENST00000379340 UQCRQO14949 82 aa6.6□□□□□ -1.35
POLR2J3-201ENST00000379340 HAMPP81172 84 aa6.6□□□□□ -1.35
POLR2J3-201ENST00000379340 A0A087WVE0 104 aa6.59□□□□□ -1.35
POLR2J3-201ENST00000379340 J3QL48 77 aa6.59□□□□□ -1.35
POLR2J3-201ENST00000379340 BCE1O60756 84 aa6.59□□□□□ -1.35
POLR2J3-201ENST00000379340 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.35
POLR2J3-201ENST00000379340 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
POLR2J3-201ENST00000379340 COX7CP15954 63 aa6.58□□□□□ -1.36
POLR2J3-201ENST00000379340 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms