RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SPRR4Q96PI1 79 aa10.05□□□□□ -0.8
PDLIM4-202ENST00000379018 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
PDLIM4-202ENST00000379018 SEC61BP60468 96 aaKnown RBP10.03□□□□□ -0.8
PDLIM4-202ENST00000379018 PMVKQ15126 192 aa10.03□□□□□ -0.8
PDLIM4-202ENST00000379018 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
PDLIM4-202ENST00000379018 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
PDLIM4-202ENST00000379018 H0Y8G0 127 aa10.01□□□□□ -0.81
PDLIM4-202ENST00000379018 C2orf91Q6ZV80 131 aa10.01□□□□□ -0.81
PDLIM4-202ENST00000379018 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
PDLIM4-202ENST00000379018 A0A1B0GV90 55 aa9.98□□□□□ -0.81
PDLIM4-202ENST00000379018 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
PDLIM4-202ENST00000379018 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
PDLIM4-202ENST00000379018 CHTOPQ9Y3Y2 248 aaKnown RBP9.97□□□□□ -0.81
PDLIM4-202ENST00000379018 ZNF22P17026 224 aaPredicted RBP9.96□□□□□ -0.82
PDLIM4-202ENST00000379018 HSD52Q0P140 79 aa9.96□□□□□ -0.82
PDLIM4-202ENST00000379018 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
PDLIM4-202ENST00000379018 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
PDLIM4-202ENST00000379018 E9PLD3 99 aa9.95□□□□□ -0.82
PDLIM4-202ENST00000379018 LINC00158P58513 81 aa9.95□□□□□ -0.82
PDLIM4-202ENST00000379018 COX17Q14061 63 aa9.95□□□□□ -0.82
PDLIM4-202ENST00000379018 TAL2Q16559 108 aa9.95□□□□□ -0.82
PDLIM4-202ENST00000379018 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
PDLIM4-202ENST00000379018 SPINK1P00995 79 aa9.94□□□□□ -0.82
PDLIM4-202ENST00000379018 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
PDLIM4-202ENST00000379018 IGLV9-49A0A0B4J1Y8 123 aa9.92□□□□□ -0.82
PDLIM4-202ENST00000379018 NCR3O14931 201 aa9.92□□□□□ -0.82
PDLIM4-202ENST00000379018 HINT1P49773 126 aaPredicted RBP9.92□□□□□ -0.82
PDLIM4-202ENST00000379018 MOBPQ13875 183 aa9.91□□□□□ -0.82
PDLIM4-202ENST00000379018 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
PDLIM4-202ENST00000379018 GAGE2AQ6NT46 116 aa9.91□□□□□ -0.82
PDLIM4-202ENST00000379018 PRYO14603 147 aa9.9□□□□□ -0.82
PDLIM4-202ENST00000379018 NMUP48645 174 aa9.9□□□□□ -0.82
PDLIM4-202ENST00000379018 HERVK_113P61574 105 aa9.9□□□□□ -0.82
PDLIM4-202ENST00000379018 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
PDLIM4-202ENST00000379018 ETDCA0A1B0GVM5 59 aa9.89□□□□□ -0.83
PDLIM4-202ENST00000379018 BATFQ16520 125 aa9.89□□□□□ -0.83
PDLIM4-202ENST00000379018 A6NDN8 102 aa9.88□□□□□ -0.83
PDLIM4-202ENST00000379018 Q8N377 158 aa9.87□□□□□ -0.83
PDLIM4-202ENST00000379018 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
PDLIM4-202ENST00000379018 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
PDLIM4-202ENST00000379018 XP32Q5T750 250 aa9.85□□□□□ -0.83
PDLIM4-202ENST00000379018 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
PDLIM4-202ENST00000379018 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
PDLIM4-202ENST00000379018 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
PDLIM4-202ENST00000379018 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
PDLIM4-202ENST00000379018 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
PDLIM4-202ENST00000379018 SLC25A20O43772 301 aa9.83□□□□□ -0.84
PDLIM4-202ENST00000379018 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
PDLIM4-202ENST00000379018 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
PDLIM4-202ENST00000379018 SPRR1AP35321 89 aa9.82□□□□□ -0.84
PDLIM4-202ENST00000379018 CEND1Q8N111 149 aa9.82□□□□□ -0.84
PDLIM4-202ENST00000379018 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
PDLIM4-202ENST00000379018 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
PDLIM4-202ENST00000379018 A0A1B0GWB2 263 aa9.81□□□□□ -0.84
PDLIM4-202ENST00000379018 LEPROTO15243 131 aa9.81□□□□□ -0.84
PDLIM4-202ENST00000379018 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
PDLIM4-202ENST00000379018 KRTAP4-16G5E9R7 235 aaPredicted RBP9.8□□□□□ -0.84
PDLIM4-202ENST00000379018 MT1HP80294 61 aa9.8□□□□□ -0.84
PDLIM4-202ENST00000379018 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
PDLIM4-202ENST00000379018 MIR7-3HGQ8N6C7 128 aa9.8□□□□□ -0.84
PDLIM4-202ENST00000379018 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
PDLIM4-202ENST00000379018 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
PDLIM4-202ENST00000379018 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
PDLIM4-202ENST00000379018 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
PDLIM4-202ENST00000379018 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 B5MCH6 92 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 J3QQQ9 107 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 KRTAP19-2Q3LHN2 52 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 PCOTHQ58A44 107 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 TTTY13Q9BZ97 58 aa9.77□□□□□ -0.85
PDLIM4-202ENST00000379018 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
PDLIM4-202ENST00000379018 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
PDLIM4-202ENST00000379018 A6NJY4 79 aa9.75□□□□□ -0.85
PDLIM4-202ENST00000379018 CFC1BP0CG36 223 aa9.75□□□□□ -0.85
PDLIM4-202ENST00000379018 FXYD2P54710 66 aa9.75□□□□□ -0.85
PDLIM4-202ENST00000379018 Q9BRP9 147 aa9.74□□□□□ -0.85
PDLIM4-202ENST00000379018 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
PDLIM4-202ENST00000379018 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
PDLIM4-202ENST00000379018 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
PDLIM4-202ENST00000379018 Q6ZVH6 145 aa9.73□□□□□ -0.85
PDLIM4-202ENST00000379018 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
PDLIM4-202ENST00000379018 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
PDLIM4-202ENST00000379018 TIMM17BO60830 172 aa9.71□□□□□ -0.86
PDLIM4-202ENST00000379018 HRCT1Q6UXD1 115 aa9.7□□□□□ -0.86
PDLIM4-202ENST00000379018 Q6ZRX8 168 aa9.7□□□□□ -0.86
PDLIM4-202ENST00000379018 GTF2H5Q6ZYL4 71 aa9.7□□□□□ -0.86
PDLIM4-202ENST00000379018 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
PDLIM4-202ENST00000379018 HERV-K104P63124 156 aa9.69□□□□□ -0.86
PDLIM4-202ENST00000379018 VAMP3Q15836 100 aa9.69□□□□□ -0.86
PDLIM4-202ENST00000379018 A0A0J9YXY3 114 aa9.68□□□□□ -0.86
PDLIM4-202ENST00000379018 M0R2T5 61 aa9.68□□□□□ -0.86
PDLIM4-202ENST00000379018 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
PDLIM4-202ENST00000379018 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
PDLIM4-202ENST00000379018 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
PDLIM4-202ENST00000379018 K7EP34 96 aa9.67□□□□□ -0.86
PDLIM4-202ENST00000379018 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
PDLIM4-202ENST00000379018 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
PDLIM4-202ENST00000379018 FABP2P12104 132 aa9.66□□□□□ -0.86
PDLIM4-202ENST00000379018 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
PDLIM4-202ENST00000379018 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms