RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 KMT2BQ9UMN6 2715 aaPredicted RBP11.81□□□□□ -0.52
GNE-201ENST00000377902 Q6ZTC4 211 aa11.8□□□□□ -0.52
GNE-201ENST00000377902 TENM3Q9P273 2699 aa11.8□□□□□ -0.52
GNE-201ENST00000377902 IGKV4-1P06312 121 aa11.78□□□□□ -0.52
GNE-201ENST00000377902 ESRGQ1W209 222 aa11.78□□□□□ -0.52
GNE-201ENST00000377902 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
GNE-201ENST00000377902 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
GNE-201ENST00000377902 TMEM254Q8TBM7 123 aa11.76□□□□□ -0.53
GNE-201ENST00000377902 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
GNE-201ENST00000377902 Q8N377 158 aa11.75□□□□□ -0.53
GNE-201ENST00000377902 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
GNE-201ENST00000377902 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
GNE-201ENST00000377902 RPL37AP8A6NKH3 93 aa11.74□□□□□ -0.53
GNE-201ENST00000377902 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
GNE-201ENST00000377902 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
GNE-201ENST00000377902 SYCNQ0VAF6 134 aa11.72□□□□□ -0.53
GNE-201ENST00000377902 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
GNE-201ENST00000377902 NKAPP1Q8N9T2 125 aa11.71□□□□□ -0.53
GNE-201ENST00000377902 WIPF1O43516 503 aa11.71□□□□□ -0.54
GNE-201ENST00000377902 LINC00336Q6ZUF6 198 aa11.7□□□□□ -0.54
GNE-201ENST00000377902 OCR1Q9BZK8 76 aa11.7□□□□□ -0.54
GNE-201ENST00000377902 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
GNE-201ENST00000377902 ST20-AS1Q8NBB2 130 aa11.68□□□□□ -0.54
GNE-201ENST00000377902 J3QKU1 62 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 NDUFC1O43677 76 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 FAM229BQ4G0N7 80 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 Q9BRP9 147 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 HIGD2AQ9BW72 106 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
GNE-201ENST00000377902 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
GNE-201ENST00000377902 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
GNE-201ENST00000377902 H3BNG1 76 aa11.65□□□□□ -0.54
GNE-201ENST00000377902 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
GNE-201ENST00000377902 F8P00451 2351 aa11.65□□□□□ -0.54
GNE-201ENST00000377902 CASC10Q5T4H9 136 aa11.65□□□□□ -0.55
GNE-201ENST00000377902 IGLV5-48A0A075B6I7 105 aa11.64□□□□□ -0.55
GNE-201ENST00000377902 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
GNE-201ENST00000377902 SMIM29Q86T20 159 aa11.64□□□□□ -0.55
GNE-201ENST00000377902 PRYO14603 147 aa11.63□□□□□ -0.55
GNE-201ENST00000377902 LINC01556Q5JQF7 62 aa11.63□□□□□ -0.55
GNE-201ENST00000377902 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
GNE-201ENST00000377902 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
GNE-201ENST00000377902 Q6ZRX8 168 aa11.62□□□□□ -0.55
GNE-201ENST00000377902 DEFB131BA0A096LNP1 70 aa11.61□□□□□ -0.55
GNE-201ENST00000377902 KRTAP7-1Q8IUC3 87 aa11.61□□□□□ -0.55
GNE-201ENST00000377902 ERC2-IT1O76042 136 aa11.61□□□□□ -0.55
GNE-201ENST00000377902 A0A0G2JQZ4 141 aa11.6□□□□□ -0.55
GNE-201ENST00000377902 A0A1W2PNN7 141 aa11.6□□□□□ -0.55
GNE-201ENST00000377902 C1orf137Q5JT78 98 aa11.6□□□□□ -0.55
GNE-201ENST00000377902 KRTAP4-16G5E9R7 235 aaPredicted RBP11.59□□□□□ -0.55
GNE-201ENST00000377902 FUSP35637 526 aaKnown RBP eCLIP11.59□□□□□ -0.55
GNE-201ENST00000377902 MPLKIPQ8TAP9 179 aa11.59□□□□□ -0.55
GNE-201ENST00000377902 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
GNE-201ENST00000377902 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
GNE-201ENST00000377902 TNP2Q05952 138 aa11.56□□□□□ -0.56
GNE-201ENST00000377902 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
GNE-201ENST00000377902 MAST4O15021 2626 aa11.55□□□□□ -0.56
GNE-201ENST00000377902 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
GNE-201ENST00000377902 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
GNE-201ENST00000377902 FBN1P35555 2871 aaKnown RBP11.53□□□□□ -0.56
GNE-201ENST00000377902 DSCR10P59022 87 aa11.53□□□□□ -0.56
GNE-201ENST00000377902 K7EQZ3 153 aa11.53□□□□□ -0.56
GNE-201ENST00000377902 Q8NBF4 154 aa11.53□□□□□ -0.56
GNE-201ENST00000377902 STAB1Q9NY15 2570 aa11.52□□□□□ -0.57
GNE-201ENST00000377902 SPRR1AP35321 89 aa11.52□□□□□ -0.57
GNE-201ENST00000377902 PRO0628Q9UI54 55 aa11.52□□□□□ -0.57
GNE-201ENST00000377902 NOTCH1P46531 2555 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 DNAH10OSP0CZ25 163 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 UBE2BP63146 152 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 CMYA5Q8N3K9 4069 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 F8WDY8 70 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
GNE-201ENST00000377902 DNAH1Q9P2D7 4330 aa11.5□□□□□ -0.57
GNE-201ENST00000377902 DEFB116Q30KQ4 102 aa11.5□□□□□ -0.57
GNE-201ENST00000377902 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
GNE-201ENST00000377902 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
GNE-201ENST00000377902 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
GNE-201ENST00000377902 LINC00588Q9Y4M8 146 aa11.49□□□□□ -0.57
GNE-201ENST00000377902 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
GNE-201ENST00000377902 SPRR4Q96PI1 79 aa11.47□□□□□ -0.57
GNE-201ENST00000377902 LYSTQ99698 3801 aa11.47□□□□□ -0.57
GNE-201ENST00000377902 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
GNE-201ENST00000377902 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
GNE-201ENST00000377902 BRK1Q8WUW1 75 aa11.46□□□□□ -0.57
GNE-201ENST00000377902 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
GNE-201ENST00000377902 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
GNE-201ENST00000377902 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
GNE-201ENST00000377902 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
GNE-201ENST00000377902 PRR4Q16378 134 aa11.42□□□□□ -0.58
GNE-201ENST00000377902 LCE6AA0A183 80 aa11.42□□□□□ -0.58
GNE-201ENST00000377902 PRB2P02812 416 aaPredicted RBP11.42□□□□□ -0.58
GNE-201ENST00000377902 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.41□□□□□ -0.58
GNE-201ENST00000377902 A0A1B0GW54 56 aa11.41□□□□□ -0.58
GNE-201ENST00000377902 PRLHP81277 87 aa11.41□□□□□ -0.58
GNE-201ENST00000377902 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
GNE-201ENST00000377902 PSCAO43653 123 aa11.39□□□□□ -0.59
GNE-201ENST00000377902 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
GNE-201ENST00000377902 ZCCHC13Q8WW36 166 aaKnown RBP11.38□□□□□ -0.59
GNE-201ENST00000377902 C1orf64Q8NEQ6 169 aa11.38□□□□□ -0.59
GNE-201ENST00000377902 COL6A5A8TX70 2615 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms