RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
CBWD3-204ENST00000377349 IGLV9-49A0A0B4J1Y8 123 aa10.95□□□□□ -0.66
CBWD3-204ENST00000377349 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
CBWD3-204ENST00000377349 E9PLD3 99 aa10.94□□□□□ -0.66
CBWD3-204ENST00000377349 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
CBWD3-204ENST00000377349 SPAG11AQ6PDA7 123 aa10.94□□□□□ -0.66
CBWD3-204ENST00000377349 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
CBWD3-204ENST00000377349 LOC107984156A0A0G2JMH3 177 aa10.93□□□□□ -0.66
CBWD3-204ENST00000377349 ERC2-IT1O76042 136 aa10.93□□□□□ -0.66
CBWD3-204ENST00000377349 ARL17AQ8IVW1 177 aa10.93□□□□□ -0.66
CBWD3-204ENST00000377349 MOBPQ13875 183 aa10.92□□□□□ -0.66
CBWD3-204ENST00000377349 SOSTDC1Q6X4U4 206 aa10.92□□□□□ -0.66
CBWD3-204ENST00000377349 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-204ENST00000377349 NDUFC2O95298 119 aa10.92□□□□□ -0.66
CBWD3-204ENST00000377349 Q6ZRX8 168 aa10.92□□□□□ -0.66
CBWD3-204ENST00000377349 Q9BRP9 147 aa10.92□□□□□ -0.66
CBWD3-204ENST00000377349 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
CBWD3-204ENST00000377349 IGLV6-57P01721 117 aa10.9□□□□□ -0.66
CBWD3-204ENST00000377349 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
CBWD3-204ENST00000377349 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
CBWD3-204ENST00000377349 ZNF73O43830 326 aaPredicted RBP10.88□□□□□ -0.67
CBWD3-204ENST00000377349 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
CBWD3-204ENST00000377349 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
CBWD3-204ENST00000377349 KRTDAPP60985 99 aa10.87□□□□□ -0.67
CBWD3-204ENST00000377349 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
CBWD3-204ENST00000377349 LINC01545Q5VT33 79 aa10.87□□□□□ -0.67
CBWD3-204ENST00000377349 PET117Q6UWS5 81 aa10.87□□□□□ -0.67
CBWD3-204ENST00000377349 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
CBWD3-204ENST00000377349 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
CBWD3-204ENST00000377349 LINC00308Q8TCZ7 52 aa10.85□□□□□ -0.67
CBWD3-204ENST00000377349 C3orf79P0CE67 100 aa10.84□□□□□ -0.67
CBWD3-204ENST00000377349 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
CBWD3-204ENST00000377349 A6NJY4 79 aa10.84□□□□□ -0.67
CBWD3-204ENST00000377349 SPINK1P00995 79 aa10.83□□□□□ -0.68
CBWD3-204ENST00000377349 KRTAP13-3Q3SY46 172 aa10.83□□□□□ -0.68
CBWD3-204ENST00000377349 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
CBWD3-204ENST00000377349 ST20-AS1Q8NBB2 130 aa10.83□□□□□ -0.68
CBWD3-204ENST00000377349 LITAFQ99732 161 aa10.83□□□□□ -0.68
CBWD3-204ENST00000377349 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
CBWD3-204ENST00000377349 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
CBWD3-204ENST00000377349 TIMM17BO60830 172 aa10.8□□□□□ -0.68
CBWD3-204ENST00000377349 C20orf202A1L168 122 aa10.79□□□□□ -0.68
CBWD3-204ENST00000377349 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
CBWD3-204ENST00000377349 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
CBWD3-204ENST00000377349 ATOH7Q8N100 152 aa10.78□□□□□ -0.68
CBWD3-204ENST00000377349 ASB16-AS1Q495Z4 193 aa10.77□□□□□ -0.68
CBWD3-204ENST00000377349 SPANXDQ9BXN6 97 aa10.75□□□□□ -0.69
CBWD3-204ENST00000377349 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
CBWD3-204ENST00000377349 COX7BP24311 80 aa10.73□□□□□ -0.69
CBWD3-204ENST00000377349 Q8N377 158 aa10.73□□□□□ -0.69
CBWD3-204ENST00000377349 DHRS4-AS1Q9P1J3 65 aa10.73□□□□□ -0.69
CBWD3-204ENST00000377349 SLC25A20O43772 301 aa10.72□□□□□ -0.69
CBWD3-204ENST00000377349 C6orf99Q4VX62 202 aa10.72□□□□□ -0.69
CBWD3-204ENST00000377349 COA6Q5JTJ3 125 aaKnown RBP10.72□□□□□ -0.69
CBWD3-204ENST00000377349 HRCT1Q6UXD1 115 aa10.72□□□□□ -0.69
CBWD3-204ENST00000377349 LINC00518Q8N0U6 118 aa10.72□□□□□ -0.69
CBWD3-204ENST00000377349 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
CBWD3-204ENST00000377349 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
CBWD3-204ENST00000377349 A6NDN8 102 aa10.69□□□□□ -0.7
CBWD3-204ENST00000377349 ELOF1P60002 83 aaKnown RBP10.68□□□□□ -0.7
CBWD3-204ENST00000377349 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
CBWD3-204ENST00000377349 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
CBWD3-204ENST00000377349 COPS9Q8WXC6 57 aa10.68□□□□□ -0.7
CBWD3-204ENST00000377349 TAL2Q16559 108 aa10.67□□□□□ -0.7
CBWD3-204ENST00000377349 PCP2Q8IVA1 136 aa10.67□□□□□ -0.7
CBWD3-204ENST00000377349 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
CBWD3-204ENST00000377349 C5orf52A6NGY3 159 aa10.67□□□□□ -0.7
CBWD3-204ENST00000377349 Q1RN00 199 aa10.67□□□□□ -0.7
CBWD3-204ENST00000377349 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.7
CBWD3-204ENST00000377349 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
CBWD3-204ENST00000377349 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
CBWD3-204ENST00000377349 IFITM1P13164 125 aa10.63□□□□□ -0.71
CBWD3-204ENST00000377349 SPRR1BP22528 89 aa10.62□□□□□ -0.71
CBWD3-204ENST00000377349 S100A2P29034 98 aa10.62□□□□□ -0.71
CBWD3-204ENST00000377349 AKR1D1P51857 326 aa10.61□□□□□ -0.71
CBWD3-204ENST00000377349 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
CBWD3-204ENST00000377349 XP32Q5T750 250 aa10.6□□□□□ -0.71
CBWD3-204ENST00000377349 Q6ZVH6 145 aa10.59□□□□□ -0.71
CBWD3-204ENST00000377349 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
CBWD3-204ENST00000377349 A0A1B0GWB2 263 aa10.58□□□□□ -0.72
CBWD3-204ENST00000377349 H7C2G1 150 aa10.58□□□□□ -0.72
CBWD3-204ENST00000377349 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
CBWD3-204ENST00000377349 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
CBWD3-204ENST00000377349 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
CBWD3-204ENST00000377349 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CBWD3-204ENST00000377349 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
CBWD3-204ENST00000377349 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
CBWD3-204ENST00000377349 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
CBWD3-204ENST00000377349 KRTAP19-2Q3LHN2 52 aa10.54□□□□□ -0.72
CBWD3-204ENST00000377349 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
CBWD3-204ENST00000377349 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
CBWD3-204ENST00000377349 S100A6P06703 90 aa10.53□□□□□ -0.72
CBWD3-204ENST00000377349 A0A0G2JQZ4 141 aa10.52□□□□□ -0.73
CBWD3-204ENST00000377349 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
CBWD3-204ENST00000377349 A4D1N5 150 aa10.5□□□□□ -0.73
CBWD3-204ENST00000377349 CRCT1Q9UGL9 99 aa10.5□□□□□ -0.73
CBWD3-204ENST00000377349 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
CBWD3-204ENST00000377349 IGLV5-48A0A075B6I7 105 aa10.48□□□□□ -0.73
CBWD3-204ENST00000377349 VAMP3Q15836 100 aa10.48□□□□□ -0.73
CBWD3-204ENST00000377349 SCGB1D1O95968 90 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms