RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RMI2Q96E14 147 aa8.64□□□□□ -1.03
ACTN1-202ENST00000376839 KLKP1Q107X0 134 aa8.63□□□□□ -1.03
ACTN1-202ENST00000376839 LINC01556Q5JQF7 62 aa8.63□□□□□ -1.03
ACTN1-202ENST00000376839 CMYA5Q8N3K9 4069 aa8.63□□□□□ -1.03
ACTN1-202ENST00000376839 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
ACTN1-202ENST00000376839 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
ACTN1-202ENST00000376839 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
ACTN1-202ENST00000376839 KCNQ1DNQ9H478 68 aa8.62□□□□□ -1.03
ACTN1-202ENST00000376839 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
ACTN1-202ENST00000376839 Q5XG85 94 aa8.61□□□□□ -1.03
ACTN1-202ENST00000376839 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
ACTN1-202ENST00000376839 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
ACTN1-202ENST00000376839 Q8N377 158 aa8.6□□□□□ -1.03
ACTN1-202ENST00000376839 IGKV4-1P06312 121 aa8.59□□□□□ -1.03
ACTN1-202ENST00000376839 F8WEM9 126 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 BPY2O14599 106 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 NREPQ16612 68 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 FLNBO75369 2602 aaKnown RBP8.58□□□□□ -1.04
ACTN1-202ENST00000376839 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
ACTN1-202ENST00000376839 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
ACTN1-202ENST00000376839 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
ACTN1-202ENST00000376839 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
ACTN1-202ENST00000376839 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
ACTN1-202ENST00000376839 F8WDY8 70 aa8.57□□□□□ -1.04
ACTN1-202ENST00000376839 Q9BRP9 147 aa8.56□□□□□ -1.04
ACTN1-202ENST00000376839 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
ACTN1-202ENST00000376839 DNAH10OSP0CZ25 163 aa8.55□□□□□ -1.04
ACTN1-202ENST00000376839 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
ACTN1-202ENST00000376839 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
ACTN1-202ENST00000376839 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
ACTN1-202ENST00000376839 Q6ZRX8 168 aa8.54□□□□□ -1.04
ACTN1-202ENST00000376839 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
ACTN1-202ENST00000376839 MAST4O15021 2626 aa8.54□□□□□ -1.04
ACTN1-202ENST00000376839 NOTCH1P46531 2555 aa8.54□□□□□ -1.04
ACTN1-202ENST00000376839 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-202ENST00000376839 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
ACTN1-202ENST00000376839 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
ACTN1-202ENST00000376839 TLX1NBP0CAT3 122 aa8.53□□□□□ -1.04
ACTN1-202ENST00000376839 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
ACTN1-202ENST00000376839 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.04
ACTN1-202ENST00000376839 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
ACTN1-202ENST00000376839 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
ACTN1-202ENST00000376839 DHRS4-AS1Q9P1J3 65 aa8.52□□□□□ -1.05
ACTN1-202ENST00000376839 F8P00451 2351 aa8.51□□□□□ -1.05
ACTN1-202ENST00000376839 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
ACTN1-202ENST00000376839 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
ACTN1-202ENST00000376839 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
ACTN1-202ENST00000376839 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 SPRR1AP35321 89 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 PRYO14603 147 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 TNP2Q05952 138 aa8.5□□□□□ -1.05
ACTN1-202ENST00000376839 ERC2-IT1O76042 136 aa8.49□□□□□ -1.05
ACTN1-202ENST00000376839 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
ACTN1-202ENST00000376839 NDUFC1O43677 76 aa8.49□□□□□ -1.05
ACTN1-202ENST00000376839 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.05
ACTN1-202ENST00000376839 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
ACTN1-202ENST00000376839 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
ACTN1-202ENST00000376839 A0A0U1RQV1 116 aa8.46□□□□□ -1.06
ACTN1-202ENST00000376839 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.06
ACTN1-202ENST00000376839 Q8NBF4 154 aa8.46□□□□□ -1.06
ACTN1-202ENST00000376839 DNAH10Q8IVF4 4471 aa8.46□□□□□ -1.06
ACTN1-202ENST00000376839 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
ACTN1-202ENST00000376839 HUWE1Q7Z6Z7 4374 aaKnown RBP8.45□□□□□ -1.06
ACTN1-202ENST00000376839 FP248Q71RG6 208 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-202ENST00000376839 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-202ENST00000376839 UBE2BP63146 152 aa8.44□□□□□ -1.06
ACTN1-202ENST00000376839 HIGD2AQ9BW72 106 aa8.44□□□□□ -1.06
ACTN1-202ENST00000376839 FAM30AQ9NZY2 134 aa8.44□□□□□ -1.06
ACTN1-202ENST00000376839 NBEAL1Q6ZS30 2694 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 LINC00474Q9P2X8 69 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 LYSTQ99698 3801 aa8.42□□□□□ -1.06
ACTN1-202ENST00000376839 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
ACTN1-202ENST00000376839 A0A1B0GW54 56 aa8.41□□□□□ -1.06
ACTN1-202ENST00000376839 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-202ENST00000376839 DSCR10P59022 87 aa8.41□□□□□ -1.06
ACTN1-202ENST00000376839 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
ACTN1-202ENST00000376839 K7EQZ3 153 aa8.39□□□□□ -1.07
ACTN1-202ENST00000376839 LINC00476Q8WZB0 136 aa8.39□□□□□ -1.07
ACTN1-202ENST00000376839 COL6A5A8TX70 2615 aa8.39□□□□□ -1.07
ACTN1-202ENST00000376839 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
ACTN1-202ENST00000376839 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
ACTN1-202ENST00000376839 PRLHP81277 87 aa8.36□□□□□ -1.07
ACTN1-202ENST00000376839 A0A096LNI7 61 aa8.35□□□□□ -1.07
ACTN1-202ENST00000376839 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
ACTN1-202ENST00000376839 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
ACTN1-202ENST00000376839 LCE6AA0A183 80 aa8.35□□□□□ -1.07
ACTN1-202ENST00000376839 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
ACTN1-202ENST00000376839 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
ACTN1-202ENST00000376839 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
ACTN1-202ENST00000376839 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
ACTN1-202ENST00000376839 PSCAO43653 123 aa8.31□□□□□ -1.08
ACTN1-202ENST00000376839 K7EIL1 84 aa8.3□□□□□ -1.08
ACTN1-202ENST00000376839 CSMD3Q7Z407 3707 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms