RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
TRIM40-206ENST00000376724 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
TRIM40-206ENST00000376724 Q8N814 137 aa8.33□□□□□ -1.08
TRIM40-206ENST00000376724 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
TRIM40-206ENST00000376724 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
TRIM40-206ENST00000376724 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
TRIM40-206ENST00000376724 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
TRIM40-206ENST00000376724 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
TRIM40-206ENST00000376724 C7orf33Q8WU49 177 aa8.32□□□□□ -1.08
TRIM40-206ENST00000376724 LINC00575Q6W349 94 aa8.31□□□□□ -1.08
TRIM40-206ENST00000376724 RPL37AP8A6NKH3 93 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 LY6G6CO95867 125 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 TGP01266 2768 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 A0A096LNI7 61 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 ATOX1O00244 68 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
TRIM40-206ENST00000376724 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 WWC2-AS2Q96NR7 200 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
TRIM40-206ENST00000376724 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
TRIM40-206ENST00000376724 COX7BP24311 80 aa8.29□□□□□ -1.08
TRIM40-206ENST00000376724 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
TRIM40-206ENST00000376724 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
TRIM40-206ENST00000376724 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
TRIM40-206ENST00000376724 Q6ZR54 194 aa8.27□□□□□ -1.09
TRIM40-206ENST00000376724 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
TRIM40-206ENST00000376724 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
TRIM40-206ENST00000376724 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
TRIM40-206ENST00000376724 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
TRIM40-206ENST00000376724 KCNQ1DNQ9H478 68 aa8.26□□□□□ -1.09
TRIM40-206ENST00000376724 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
TRIM40-206ENST00000376724 TMEM258P61165 79 aa8.25□□□□□ -1.09
TRIM40-206ENST00000376724 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
TRIM40-206ENST00000376724 IGLV1-50A0A075B6I6 118 aa8.25□□□□□ -1.09
TRIM40-206ENST00000376724 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
TRIM40-206ENST00000376724 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
TRIM40-206ENST00000376724 Q6ZQY7 126 aa8.24□□□□□ -1.09
TRIM40-206ENST00000376724 A0A087WTM6 91 aa8.24□□□□□ -1.09
TRIM40-206ENST00000376724 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
TRIM40-206ENST00000376724 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRIM40-206ENST00000376724 TMEM256-PLSCR3K7ERE1 68 aa8.23□□□□□ -1.09
TRIM40-206ENST00000376724 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
TRIM40-206ENST00000376724 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
TRIM40-206ENST00000376724 LINC00476Q8WZB0 136 aa8.22□□□□□ -1.09
TRIM40-206ENST00000376724 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
TRIM40-206ENST00000376724 C14orf132Q9NPU4 83 aa8.22□□□□□ -1.09
TRIM40-206ENST00000376724 SERP2Q8N6R1 65 aa8.21□□□□□ -1.1
TRIM40-206ENST00000376724 DNAH2Q9P225 4427 aa8.21□□□□□ -1.1
TRIM40-206ENST00000376724 PRYO14603 147 aa8.2□□□□□ -1.1
TRIM40-206ENST00000376724 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
TRIM40-206ENST00000376724 Q6JHZ5 121 aa8.19□□□□□ -1.1
TRIM40-206ENST00000376724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
TRIM40-206ENST00000376724 PANO1I0J062 215 aa8.18□□□□□ -1.1
TRIM40-206ENST00000376724 OBSCN-AS1Q96MR7 158 aa8.18□□□□□ -1.1
TRIM40-206ENST00000376724 LAMTOR3Q9UHA4 124 aa8.18□□□□□ -1.1
TRIM40-206ENST00000376724 C3orf84H3BNL1 204 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 OXTP01178 125 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
TRIM40-206ENST00000376724 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
TRIM40-206ENST00000376724 RTL8CO15255 209 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 SPRR1AP35321 89 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 Q6ZRX8 168 aa8.17□□□□□ -1.1
TRIM40-206ENST00000376724 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
TRIM40-206ENST00000376724 JMJD7-PLA2G4BH0Y9G9 81 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 UBE2BP63146 152 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 Q5XG85 94 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 DSCR8Q96T75 97 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 Q9BRP9 147 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
TRIM40-206ENST00000376724 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.11
TRIM40-206ENST00000376724 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.11
TRIM40-206ENST00000376724 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.14□□□□□ -1.11
TRIM40-206ENST00000376724 TNP2Q05952 138 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 H3BQ85 93 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
TRIM40-206ENST00000376724 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
TRIM40-206ENST00000376724 GHRHP01286 108 aa8.12□□□□□ -1.11
TRIM40-206ENST00000376724 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
TRIM40-206ENST00000376724 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
TRIM40-206ENST00000376724 A0A087WVE0 104 aa8.12□□□□□ -1.11
TRIM40-206ENST00000376724 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
TRIM40-206ENST00000376724 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
TRIM40-206ENST00000376724 PRLHP81277 87 aa8.11□□□□□ -1.11
TRIM40-206ENST00000376724 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
TRIM40-206ENST00000376724 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
TRIM40-206ENST00000376724 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
TRIM40-206ENST00000376724 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
TRIM40-206ENST00000376724 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
TRIM40-206ENST00000376724 CCKP06307 115 aa8.09□□□□□ -1.11
TRIM40-206ENST00000376724 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
TRIM40-206ENST00000376724 Q8N377 158 aa8.08□□□□□ -1.12
TRIM40-206ENST00000376724 HIGD2AQ9BW72 106 aa8.07□□□□□ -1.12
TRIM40-206ENST00000376724 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms