RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 TRBV7-6A0A0J9YX20 115 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 ELOF1P60002 83 aaKnown RBP6.29□□□□□ -1.4
TRIM39-202ENST00000376659 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 KRTAP7-1Q8IUC3 87 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 M0R2N4 97 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
TRIM39-202ENST00000376659 GHRHP01286 108 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 DNAH10OSP0CZ25 163 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 Q6ZRU5 148 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 TRBV10-3A0A0K0K1G6 114 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 DNAL4O96015 105 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 HTN3P15516 51 aa6.28□□□□□ -1.4
TRIM39-202ENST00000376659 TMEM256-PLSCR3K7ERE1 68 aa6.27□□□□□ -1.41
TRIM39-202ENST00000376659 Q6ZRP5 223 aa6.27□□□□□ -1.41
TRIM39-202ENST00000376659 FBN3Q75N90 2809 aa6.27□□□□□ -1.41
TRIM39-202ENST00000376659 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
TRIM39-202ENST00000376659 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
TRIM39-202ENST00000376659 TM2D3Q9BRN9 247 aa6.26□□□□□ -1.41
TRIM39-202ENST00000376659 JMJD7-PLA2G4BH0Y9G9 81 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 TRBV7-4A0A0J9YYF1 115 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 CD164Q04900 197 aa6.25□□□□□ -1.41
TRIM39-202ENST00000376659 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
TRIM39-202ENST00000376659 LINC01547P58512 204 aaPredicted RBP6.24□□□□□ -1.41
TRIM39-202ENST00000376659 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
TRIM39-202ENST00000376659 PLA2G2DQ9UNK4 145 aa6.24□□□□□ -1.41
TRIM39-202ENST00000376659 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
TRIM39-202ENST00000376659 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
TRIM39-202ENST00000376659 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
TRIM39-202ENST00000376659 STAB1Q9NY15 2570 aa6.23□□□□□ -1.41
TRIM39-202ENST00000376659 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
TRIM39-202ENST00000376659 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
TRIM39-202ENST00000376659 NBEAL1Q6ZS30 2694 aa6.23□□□□□ -1.41
TRIM39-202ENST00000376659 EPM2AB3EWF7 344 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 CASC10Q5T4H9 136 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 H7BZZ5 65 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 F8P00451 2351 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 LINC00588Q9Y4M8 146 aa6.22□□□□□ -1.41
TRIM39-202ENST00000376659 KCNQ1DNQ9H478 68 aa6.21□□□□□ -1.41
TRIM39-202ENST00000376659 DEFB131BA0A096LNP1 70 aa6.21□□□□□ -1.42
TRIM39-202ENST00000376659 M0R378 163 aa6.21□□□□□ -1.42
TRIM39-202ENST00000376659 SPRR1AP35321 89 aa6.21□□□□□ -1.42
TRIM39-202ENST00000376659 Q6ZQY7 126 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 F8WEM9 126 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 ATP5EP2Q5VTU8 51 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
TRIM39-202ENST00000376659 C11orf45Q8TAV5 145 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
TRIM39-202ENST00000376659 K7EIL1 84 aa6.19□□□□□ -1.42
TRIM39-202ENST00000376659 RMI2Q96E14 147 aa6.18□□□□□ -1.42
TRIM39-202ENST00000376659 H3BQ85 93 aa6.18□□□□□ -1.42
TRIM39-202ENST00000376659 COX7BP24311 80 aa6.17□□□□□ -1.42
TRIM39-202ENST00000376659 TNP2Q05952 138 aa6.17□□□□□ -1.42
TRIM39-202ENST00000376659 Q9BRP9 147 aa6.17□□□□□ -1.42
TRIM39-202ENST00000376659 NOTCH1P46531 2555 aa6.16□□□□□ -1.42
TRIM39-202ENST00000376659 KRTAP1-5Q9BYS1 174 aa6.16□□□□□ -1.42
TRIM39-202ENST00000376659 PKD1P98161 4303 aa6.16□□□□□ -1.42
TRIM39-202ENST00000376659 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
TRIM39-202ENST00000376659 DNAH11Q96DT5 4516 aa6.16□□□□□ -1.42
TRIM39-202ENST00000376659 FAM168BA1KXE4 195 aa6.15□□□□□ -1.42
TRIM39-202ENST00000376659 SYCNQ0VAF6 134 aa6.15□□□□□ -1.43
TRIM39-202ENST00000376659 IGLV1-50A0A075B6I6 118 aa6.15□□□□□ -1.43
TRIM39-202ENST00000376659 TRAV10A0A0B4J240 114 aa6.15□□□□□ -1.43
TRIM39-202ENST00000376659 Q6ZVQ6 151 aa6.15□□□□□ -1.43
TRIM39-202ENST00000376659 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 Q8N377 158 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 CXCL6P80162 114 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
TRIM39-202ENST00000376659 IGKV2D-24A0A075B6R9 120 aa6.12□□□□□ -1.43
TRIM39-202ENST00000376659 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
TRIM39-202ENST00000376659 Q6ZRX8 168 aa6.12□□□□□ -1.43
TRIM39-202ENST00000376659 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
TRIM39-202ENST00000376659 MGAM2Q2M2H8 2515 aa6.11□□□□□ -1.43
TRIM39-202ENST00000376659 PDE6GP18545 87 aa6.11□□□□□ -1.43
TRIM39-202ENST00000376659 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
TRIM39-202ENST00000376659 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
TRIM39-202ENST00000376659 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
TRIM39-202ENST00000376659 PRYO14603 147 aa6.1□□□□□ -1.43
TRIM39-202ENST00000376659 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TRIM39-202ENST00000376659 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
TRIM39-202ENST00000376659 BCE1O60756 84 aa6.1□□□□□ -1.43
TRIM39-202ENST00000376659 LRCOL1A6NCL2 159 aa6.08□□□□□ -1.44
TRIM39-202ENST00000376659 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
TRIM39-202ENST00000376659 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
TRIM39-202ENST00000376659 H3BS24 57 aa6.08□□□□□ -1.44
TRIM39-202ENST00000376659 UBL5Q9BZL1 73 aa6.08□□□□□ -1.44
TRIM39-202ENST00000376659 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
TRIM39-202ENST00000376659 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
TRIM39-202ENST00000376659 NDUFC1O43677 76 aa6.07□□□□□ -1.44
TRIM39-202ENST00000376659 ERC2-IT1O76042 136 aa6.07□□□□□ -1.44
TRIM39-202ENST00000376659 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms