RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 HAMPP81172 84 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 CCL18P55774 89 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 SONP18583 2426 aaKnown RBP5.56□□□□□ -1.52
GARNL3-201ENST00000373386 TRGV4A0A0C4DH28 118 aa5.56□□□□□ -1.52
GARNL3-201ENST00000373386 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
GARNL3-201ENST00000373386 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
GARNL3-201ENST00000373386 IGKV3OR2-268A0A0C4DH90 116 aa5.55□□□□□ -1.52
GARNL3-201ENST00000373386 LECT2O14960 151 aa5.54□□□□□ -1.52
GARNL3-201ENST00000373386 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
GARNL3-201ENST00000373386 NF1P21359 2839 aa5.54□□□□□ -1.52
GARNL3-201ENST00000373386 IGLV4-60A0A075B6I1 120 aa5.54□□□□□ -1.52
GARNL3-201ENST00000373386 LY6G6DO95868 133 aa5.54□□□□□ -1.52
GARNL3-201ENST00000373386 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
GARNL3-201ENST00000373386 HIVEP1P15822 2718 aa5.54□□□□□ -1.52
GARNL3-201ENST00000373386 LOC101927531A0A1B0GV80 90 aa5.53□□□□□ -1.52
GARNL3-201ENST00000373386 MUC7Q8TAX7 377 aa5.53□□□□□ -1.52
GARNL3-201ENST00000373386 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
GARNL3-201ENST00000373386 A0A087X002 238 aa5.52□□□□□ -1.53
GARNL3-201ENST00000373386 Q8IZM0 81 aa5.52□□□□□ -1.53
GARNL3-201ENST00000373386 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
GARNL3-201ENST00000373386 CYSRT1A8MQ03 144 aa5.52□□□□□ -1.53
GARNL3-201ENST00000373386 COX17Q14061 63 aa5.52□□□□□ -1.53
GARNL3-201ENST00000373386 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
GARNL3-201ENST00000373386 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
GARNL3-201ENST00000373386 PRO0255Q9UI72 69 aa5.51□□□□□ -1.53
GARNL3-201ENST00000373386 MTORP42345 2549 aa5.51□□□□□ -1.53
GARNL3-201ENST00000373386 WFDC10AQ9H1F0 79 aa5.51□□□□□ -1.53
GARNL3-201ENST00000373386 LINC00476Q8WZB0 136 aa5.5□□□□□ -1.53
GARNL3-201ENST00000373386 C9orf66Q5T8R8 295 aa5.5□□□□□ -1.53
GARNL3-201ENST00000373386 Q8N814 137 aa5.5□□□□□ -1.53
GARNL3-201ENST00000373386 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
GARNL3-201ENST00000373386 SMR3AQ99954 134 aa5.5□□□□□ -1.53
GARNL3-201ENST00000373386 SLPIP03973 132 aa5.49□□□□□ -1.53
GARNL3-201ENST00000373386 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
GARNL3-201ENST00000373386 KRTAP10-3P60369 221 aa5.48□□□□□ -1.53
GARNL3-201ENST00000373386 LOC110117498A0A087WWA1 95 aa5.48□□□□□ -1.53
GARNL3-201ENST00000373386 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
GARNL3-201ENST00000373386 NDUFB1O75438 58 aa5.47□□□□□ -1.53
GARNL3-201ENST00000373386 NIPBLQ6KC79 2804 aaeCLIP5.47□□□□□ -1.53
GARNL3-201ENST00000373386 Q6ZQT0 140 aa5.47□□□□□ -1.53
GARNL3-201ENST00000373386 LCE6AA0A183 80 aa5.46□□□□□ -1.54
GARNL3-201ENST00000373386 PDE6GP18545 87 aa5.46□□□□□ -1.54
GARNL3-201ENST00000373386 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
GARNL3-201ENST00000373386 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
GARNL3-201ENST00000373386 Q9BRP9 147 aa5.45□□□□□ -1.54
GARNL3-201ENST00000373386 FN1P02751 2386 aaKnown RBP5.45□□□□□ -1.54
GARNL3-201ENST00000373386 C1orf134Q5TEV5 83 aa5.45□□□□□ -1.54
GARNL3-201ENST00000373386 ADM2Q7Z4H4 148 aa5.45□□□□□ -1.54
GARNL3-201ENST00000373386 ZCCHC13Q8WW36 166 aaKnown RBP5.45□□□□□ -1.54
GARNL3-201ENST00000373386 F8P00451 2351 aa5.44□□□□□ -1.54
GARNL3-201ENST00000373386 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
GARNL3-201ENST00000373386 B9D2Q9BPU9 175 aa5.44□□□□□ -1.54
GARNL3-201ENST00000373386 CLPSL2Q6UWE3 100 aa5.44□□□□□ -1.54
GARNL3-201ENST00000373386 TEP1Q99973 2627 aaKnown RBP5.44□□□□□ -1.54
GARNL3-201ENST00000373386 HIVEP2P31629 2446 aa5.44□□□□□ -1.54
GARNL3-201ENST00000373386 H3BQ85 93 aa5.43□□□□□ -1.54
GARNL3-201ENST00000373386 GVQW2A0A096LPI5 108 aaPredicted RBP5.43□□□□□ -1.54
GARNL3-201ENST00000373386 WNK1Q9H4A3 2382 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 H3BNG1 76 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 LELP1Q5T871 98 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 Q8NAQ8 132 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 PRR34Q9NV39 138 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 IGHV4-30-4P0DP06 118 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
GARNL3-201ENST00000373386 SETD2Q9BYW2 2564 aaPredicted RBP5.41□□□□□ -1.54
GARNL3-201ENST00000373386 MAST4O15021 2626 aa5.41□□□□□ -1.54
GARNL3-201ENST00000373386 PRR4Q16378 134 aa5.41□□□□□ -1.54
GARNL3-201ENST00000373386 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
GARNL3-201ENST00000373386 SPART-AS1P0CW21 52 aa5.41□□□□□ -1.54
GARNL3-201ENST00000373386 A0A1B0GW54 56 aa5.4□□□□□ -1.54
GARNL3-201ENST00000373386 PRB2P02812 416 aaPredicted RBP5.4□□□□□ -1.54
GARNL3-201ENST00000373386 ANGP03950 147 aaKnown RBP5.4□□□□□ -1.54
GARNL3-201ENST00000373386 A0A096LPF7 62 aa5.4□□□□□ -1.55
GARNL3-201ENST00000373386 HIGD2BQ4VC39 106 aa5.4□□□□□ -1.55
GARNL3-201ENST00000373386 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
GARNL3-201ENST00000373386 ROMO1P60602 79 aa5.39□□□□□ -1.55
GARNL3-201ENST00000373386 C2CD3Q4AC94 2353 aa5.39□□□□□ -1.55
GARNL3-201ENST00000373386 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
GARNL3-201ENST00000373386 INAFM1C9JVW0 142 aa5.38□□□□□ -1.55
GARNL3-201ENST00000373386 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
GARNL3-201ENST00000373386 Q8NDZ9 215 aa5.38□□□□□ -1.55
GARNL3-201ENST00000373386 TENM1Q9UKZ4 2725 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 IGLV6-57P01721 117 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 DEFB135Q30KP9 77 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
GARNL3-201ENST00000373386 JMJD1CQ15652 2540 aa5.36□□□□□ -1.55
GARNL3-201ENST00000373386 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
GARNL3-201ENST00000373386 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
GARNL3-201ENST00000373386 J3QL48 77 aa5.36□□□□□ -1.55
GARNL3-201ENST00000373386 RTL8CO15255 209 aa5.36□□□□□ -1.55
GARNL3-201ENST00000373386 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
GARNL3-201ENST00000373386 UNQ6190/PRO20217Q6UXQ8 127 aa5.36□□□□□ -1.55
GARNL3-201ENST00000373386 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
GARNL3-201ENST00000373386 Q6ZQY7 126 aa5.35□□□□□ -1.55
GARNL3-201ENST00000373386 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
GARNL3-201ENST00000373386 M0R2N4 97 aa5.34□□□□□ -1.55
GARNL3-201ENST00000373386 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms