RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.95
USP49-201ENST00000373006 C3orf84H3BNL1 204 aa9.15□□□□□ -0.95
USP49-201ENST00000373006 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
USP49-201ENST00000373006 BCE1O60756 84 aa9.14□□□□□ -0.95
USP49-201ENST00000373006 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP49-201ENST00000373006 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
USP49-201ENST00000373006 LELP1Q5T871 98 aa9.12□□□□□ -0.95
USP49-201ENST00000373006 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
USP49-201ENST00000373006 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
USP49-201ENST00000373006 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
USP49-201ENST00000373006 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
USP49-201ENST00000373006 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
USP49-201ENST00000373006 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
USP49-201ENST00000373006 CAMK2N2Q96S95 79 aa9.1□□□□□ -0.95
USP49-201ENST00000373006 MAST4O15021 2626 aa9.09□□□□□ -0.95
USP49-201ENST00000373006 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
USP49-201ENST00000373006 VPREB1P12018 145 aa9.08□□□□□ -0.96
USP49-201ENST00000373006 ESRGQ1W209 222 aa9.08□□□□□ -0.96
USP49-201ENST00000373006 H3BQ85 93 aa9.08□□□□□ -0.96
USP49-201ENST00000373006 PRYO14603 147 aa9.07□□□□□ -0.96
USP49-201ENST00000373006 Q8NAQ8 132 aa9.07□□□□□ -0.96
USP49-201ENST00000373006 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
USP49-201ENST00000373006 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
USP49-201ENST00000373006 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
USP49-201ENST00000373006 Q6ZRU5 148 aa9.06□□□□□ -0.96
USP49-201ENST00000373006 NOTCH1P46531 2555 aa9.05□□□□□ -0.96
USP49-201ENST00000373006 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
USP49-201ENST00000373006 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
USP49-201ENST00000373006 APOC4P55056 127 aa9.04□□□□□ -0.96
USP49-201ENST00000373006 M0R378 163 aa9.04□□□□□ -0.96
USP49-201ENST00000373006 NDUFC1O43677 76 aa9.03□□□□□ -0.96
USP49-201ENST00000373006 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
USP49-201ENST00000373006 A8MU10 97 aa9.03□□□□□ -0.96
USP49-201ENST00000373006 Q6ZRP5 223 aa9.01□□□□□ -0.97
USP49-201ENST00000373006 EGFEM1PQ0D2K5 195 aa9□□□□□ -0.97
USP49-201ENST00000373006 TENM3Q9P273 2699 aa9□□□□□ -0.97
USP49-201ENST00000373006 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
USP49-201ENST00000373006 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
USP49-201ENST00000373006 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
USP49-201ENST00000373006 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
USP49-201ENST00000373006 COL6A5A8TX70 2615 aa8.98□□□□□ -0.97
USP49-201ENST00000373006 DEFB116Q30KQ4 102 aa8.98□□□□□ -0.97
USP49-201ENST00000373006 FBN1P35555 2871 aaKnown RBP8.97□□□□□ -0.97
USP49-201ENST00000373006 KRTAP26-1Q6PEX3 210 aa8.97□□□□□ -0.97
USP49-201ENST00000373006 Q8N377 158 aa8.96□□□□□ -0.98
USP49-201ENST00000373006 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
USP49-201ENST00000373006 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
USP49-201ENST00000373006 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
USP49-201ENST00000373006 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 IGKV2D-24A0A075B6R9 120 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 A8MUN3 132 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 NKAPP1Q8N9T2 125 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 ERC2-IT1O76042 136 aa8.94□□□□□ -0.98
USP49-201ENST00000373006 Q6ZTC4 211 aa8.93□□□□□ -0.98
USP49-201ENST00000373006 CD164Q04900 197 aa8.92□□□□□ -0.98
USP49-201ENST00000373006 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
USP49-201ENST00000373006 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
USP49-201ENST00000373006 NBEAL1Q6ZS30 2694 aa8.92□□□□□ -0.98
USP49-201ENST00000373006 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
USP49-201ENST00000373006 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
USP49-201ENST00000373006 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
USP49-201ENST00000373006 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.98
USP49-201ENST00000373006 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
USP49-201ENST00000373006 KCNQ1DNQ9H478 68 aa8.9□□□□□ -0.98
USP49-201ENST00000373006 IGLV5-48A0A075B6I7 105 aa8.89□□□□□ -0.99
USP49-201ENST00000373006 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
USP49-201ENST00000373006 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
USP49-201ENST00000373006 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
USP49-201ENST00000373006 Q9BRP9 147 aa8.87□□□□□ -0.99
USP49-201ENST00000373006 A0A0G2JQZ4 141 aa8.87□□□□□ -0.99
USP49-201ENST00000373006 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
USP49-201ENST00000373006 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
USP49-201ENST00000373006 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
USP49-201ENST00000373006 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
USP49-201ENST00000373006 MGAM2Q2M2H8 2515 aa8.85□□□□□ -0.99
USP49-201ENST00000373006 WFDC13Q8IUB5 93 aa8.85□□□□□ -0.99
USP49-201ENST00000373006 Q6ZRX8 168 aa8.85□□□□□ -0.99
USP49-201ENST00000373006 C11orf45Q8TAV5 145 aa8.83□□□□□ -1
USP49-201ENST00000373006 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
USP49-201ENST00000373006 K7EQZ3 153 aa8.83□□□□□ -1
USP49-201ENST00000373006 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
USP49-201ENST00000373006 DSCR10P59022 87 aa8.82□□□□□ -1
USP49-201ENST00000373006 Q8NBF4 154 aa8.81□□□□□ -1
USP49-201ENST00000373006 ANK2Q01484 3957 aa8.81□□□□□ -1
USP49-201ENST00000373006 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
USP49-201ENST00000373006 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
USP49-201ENST00000373006 KRTAP4-16G5E9R7 235 aaPredicted RBP8.8□□□□□ -1
USP49-201ENST00000373006 TNP2Q05952 138 aa8.79□□□□□ -1
USP49-201ENST00000373006 CASC10Q5T4H9 136 aa8.79□□□□□ -1
USP49-201ENST00000373006 H3BNG1 76 aa8.79□□□□□ -1
USP49-201ENST00000373006 UBE2BP63146 152 aa8.79□□□□□ -1
USP49-201ENST00000373006 PRR15LQ9BU68 103 aa8.79□□□□□ -1
USP49-201ENST00000373006 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
USP49-201ENST00000373006 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
USP49-201ENST00000373006 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
USP49-201ENST00000373006 KRTAP10-11P60412 298 aa8.77□□□□□ -1
USP49-201ENST00000373006 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
USP49-201ENST00000373006 LINC00208Q96KT6 92 aa8.77□□□□□ -1.01
USP49-201ENST00000373006 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms