RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
CSTF2-201ENST00000372972 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
CSTF2-201ENST00000372972 PSCAO43653 123 aa8.64□□□□□ -1.03
CSTF2-201ENST00000372972 Q6ZQT0 140 aa8.62□□□□□ -1.03
CSTF2-201ENST00000372972 DSCR8Q96T75 97 aa8.62□□□□□ -1.03
CSTF2-201ENST00000372972 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
CSTF2-201ENST00000372972 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
CSTF2-201ENST00000372972 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
CSTF2-201ENST00000372972 PDE6GP18545 87 aa8.61□□□□□ -1.03
CSTF2-201ENST00000372972 CNBPP62633 177 aaKnown RBP8.61□□□□□ -1.03
CSTF2-201ENST00000372972 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
CSTF2-201ENST00000372972 PRYO14603 147 aa8.61□□□□□ -1.03
CSTF2-201ENST00000372972 Q6JHZ5 121 aa8.61□□□□□ -1.03
CSTF2-201ENST00000372972 LYSTQ99698 3801 aa8.6□□□□□ -1.03
CSTF2-201ENST00000372972 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
CSTF2-201ENST00000372972 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
CSTF2-201ENST00000372972 C14orf177Q52M58 125 aa8.59□□□□□ -1.03
CSTF2-201ENST00000372972 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
CSTF2-201ENST00000372972 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
CSTF2-201ENST00000372972 SPRR1AP35321 89 aa8.58□□□□□ -1.04
CSTF2-201ENST00000372972 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
CSTF2-201ENST00000372972 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 B5MCH6 92 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 ETDCA0A1B0GVM5 59 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 Q6ZRX8 168 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 FBN3Q75N90 2809 aa8.57□□□□□ -1.04
CSTF2-201ENST00000372972 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
CSTF2-201ENST00000372972 NBDYA0A0U1RRE5 68 aa8.56□□□□□ -1.04
CSTF2-201ENST00000372972 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
CSTF2-201ENST00000372972 DNAH10Q8IVF4 4471 aa8.55□□□□□ -1.04
CSTF2-201ENST00000372972 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
CSTF2-201ENST00000372972 A0A096LNI7 61 aa8.55□□□□□ -1.04
CSTF2-201ENST00000372972 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
CSTF2-201ENST00000372972 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.53□□□□□ -1.04
CSTF2-201ENST00000372972 M0R2N4 97 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 ATP5EP2Q5VTU8 51 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 Q9BRP9 147 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 Q8N377 158 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
CSTF2-201ENST00000372972 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
CSTF2-201ENST00000372972 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
CSTF2-201ENST00000372972 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
CSTF2-201ENST00000372972 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
CSTF2-201ENST00000372972 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
CSTF2-201ENST00000372972 HIST1H4AP62805 103 aaKnown RBP8.5□□□□□ -1.05
CSTF2-201ENST00000372972 Q6ZRN7 208 aaPredicted RBP8.5□□□□□ -1.05
CSTF2-201ENST00000372972 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
CSTF2-201ENST00000372972 UBE2BP63146 152 aa8.48□□□□□ -1.05
CSTF2-201ENST00000372972 Q6ZVQ6 151 aa8.48□□□□□ -1.05
CSTF2-201ENST00000372972 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
CSTF2-201ENST00000372972 IGLV5-48A0A075B6I7 105 aa8.48□□□□□ -1.05
CSTF2-201ENST00000372972 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
CSTF2-201ENST00000372972 A0A087WVE0 104 aa8.47□□□□□ -1.05
CSTF2-201ENST00000372972 ERC2-IT1O76042 136 aa8.46□□□□□ -1.05
CSTF2-201ENST00000372972 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.05
CSTF2-201ENST00000372972 TGP01266 2768 aa8.46□□□□□ -1.06
CSTF2-201ENST00000372972 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.06
CSTF2-201ENST00000372972 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.06
CSTF2-201ENST00000372972 ATOX1O00244 68 aa8.45□□□□□ -1.06
CSTF2-201ENST00000372972 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
CSTF2-201ENST00000372972 HAMPP81172 84 aa8.45□□□□□ -1.06
CSTF2-201ENST00000372972 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
CSTF2-201ENST00000372972 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
CSTF2-201ENST00000372972 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
CSTF2-201ENST00000372972 CXCL6P80162 114 aa8.42□□□□□ -1.06
CSTF2-201ENST00000372972 Q6ZR54 194 aa8.42□□□□□ -1.06
CSTF2-201ENST00000372972 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
CSTF2-201ENST00000372972 TNP2Q05952 138 aa8.41□□□□□ -1.06
CSTF2-201ENST00000372972 PRLHP81277 87 aa8.41□□□□□ -1.06
CSTF2-201ENST00000372972 LY6G6CO95867 125 aa8.4□□□□□ -1.06
CSTF2-201ENST00000372972 A0A1B0GW54 56 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 UQCRQO14949 82 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 A0A087WTM6 91 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 COX7CP15954 63 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSTF2-201ENST00000372972 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
CSTF2-201ENST00000372972 NREPQ16612 68 aa8.38□□□□□ -1.07
CSTF2-201ENST00000372972 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
CSTF2-201ENST00000372972 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
CSTF2-201ENST00000372972 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
CSTF2-201ENST00000372972 H0Y9J4 135 aa8.37□□□□□ -1.07
CSTF2-201ENST00000372972 LINC00476Q8WZB0 136 aa8.37□□□□□ -1.07
CSTF2-201ENST00000372972 A0A1W2PNM2 257 aa8.36□□□□□ -1.07
CSTF2-201ENST00000372972 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
CSTF2-201ENST00000372972 PANO1I0J062 215 aa8.36□□□□□ -1.07
CSTF2-201ENST00000372972 SERP2Q8N6R1 65 aa8.35□□□□□ -1.07
CSTF2-201ENST00000372972 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
CSTF2-201ENST00000372972 F8WEM9 126 aa8.35□□□□□ -1.07
CSTF2-201ENST00000372972 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
CSTF2-201ENST00000372972 Q8NBF4 154 aa8.35□□□□□ -1.07
CSTF2-201ENST00000372972 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
CSTF2-201ENST00000372972 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
CSTF2-201ENST00000372972 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
CSTF2-201ENST00000372972 SPRR4Q96PI1 79 aa8.33□□□□□ -1.08
CSTF2-201ENST00000372972 UBE2AP49459 152 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms