RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 C6orf99Q4VX62 202 aa12.07□□□□□ -0.48
VEGFA-206ENST00000372077 KMT2AQ03164 3969 aa12.06□□□□□ -0.48
VEGFA-206ENST00000372077 PRO0628Q9UI54 55 aa12.06□□□□□ -0.48
VEGFA-206ENST00000372077 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
VEGFA-206ENST00000372077 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
VEGFA-206ENST00000372077 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
VEGFA-206ENST00000372077 PKIGQ9Y2B9 76 aa12.04□□□□□ -0.48
VEGFA-206ENST00000372077 DNAH10Q8IVF4 4471 aa12.04□□□□□ -0.48
VEGFA-206ENST00000372077 ATOX1O00244 68 aa12.03□□□□□ -0.48
VEGFA-206ENST00000372077 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
VEGFA-206ENST00000372077 LRCOL1A6NCL2 159 aa12.02□□□□□ -0.48
VEGFA-206ENST00000372077 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.48
VEGFA-206ENST00000372077 SEC61GP60059 68 aa12.02□□□□□ -0.49
VEGFA-206ENST00000372077 C1orf134Q5TEV5 83 aa12.01□□□□□ -0.49
VEGFA-206ENST00000372077 LINC00336Q6ZUF6 198 aa12.01□□□□□ -0.49
VEGFA-206ENST00000372077 ORMDL1Q9P0S3 153 aa12.01□□□□□ -0.49
VEGFA-206ENST00000372077 H0YGX0 51 aa12□□□□□ -0.49
VEGFA-206ENST00000372077 Q6ZRU5 148 aa12□□□□□ -0.49
VEGFA-206ENST00000372077 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
VEGFA-206ENST00000372077 LCE6AA0A183 80 aa11.99□□□□□ -0.49
VEGFA-206ENST00000372077 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
VEGFA-206ENST00000372077 COX17Q14061 63 aa11.98□□□□□ -0.49
VEGFA-206ENST00000372077 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
VEGFA-206ENST00000372077 Q8N814 137 aa11.97□□□□□ -0.49
VEGFA-206ENST00000372077 DNAH2Q9P225 4427 aa11.97□□□□□ -0.49
VEGFA-206ENST00000372077 A0A087WTM6 91 aa11.94□□□□□ -0.5
VEGFA-206ENST00000372077 LAMTOR3Q9UHA4 124 aa11.94□□□□□ -0.5
VEGFA-206ENST00000372077 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
VEGFA-206ENST00000372077 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
VEGFA-206ENST00000372077 SACSQ9NZJ4 4579 aa11.93□□□□□ -0.5
VEGFA-206ENST00000372077 FAM19A1Q7Z5A9 133 aa11.92□□□□□ -0.5
VEGFA-206ENST00000372077 HYDINQ4G0P3 5121 aa11.91□□□□□ -0.5
VEGFA-206ENST00000372077 RTL8CO15255 209 aa11.91□□□□□ -0.5
VEGFA-206ENST00000372077 TRAV23DV6A0A075B6W5 121 aa11.9□□□□□ -0.5
VEGFA-206ENST00000372077 V9GYY9 64 aa11.9□□□□□ -0.5
VEGFA-206ENST00000372077 TRBV10-3A0A0K0K1G6 114 aa11.9□□□□□ -0.5
VEGFA-206ENST00000372077 Q6ZQY7 126 aa11.9□□□□□ -0.5
VEGFA-206ENST00000372077 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
VEGFA-206ENST00000372077 TLX1NBP0CAT3 122 aa11.89□□□□□ -0.51
VEGFA-206ENST00000372077 NDUFC2-KCTD14E9PQ53 114 aa11.89□□□□□ -0.51
VEGFA-206ENST00000372077 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-206ENST00000372077 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
VEGFA-206ENST00000372077 FAM236DA0A1B0GTK5 79 aa11.88□□□□□ -0.51
VEGFA-206ENST00000372077 FAM236CP0DP71 79 aa11.88□□□□□ -0.51
VEGFA-206ENST00000372077 SCXQ7RTU7 201 aa11.88□□□□□ -0.51
VEGFA-206ENST00000372077 TNP2Q05952 138 aa11.87□□□□□ -0.51
VEGFA-206ENST00000372077 Q6JHZ5 121 aa11.86□□□□□ -0.51
VEGFA-206ENST00000372077 Q6ZRP5 223 aa11.86□□□□□ -0.51
VEGFA-206ENST00000372077 CCKP06307 115 aa11.85□□□□□ -0.51
VEGFA-206ENST00000372077 C9orf163Q8N9P6 203 aa11.84□□□□□ -0.51
VEGFA-206ENST00000372077 HAMPP81172 84 aa11.83□□□□□ -0.52
VEGFA-206ENST00000372077 LINC00575Q6W349 94 aa11.83□□□□□ -0.52
VEGFA-206ENST00000372077 FRAS1Q86XX4 4008 aa11.83□□□□□ -0.52
VEGFA-206ENST00000372077 TMEM256-PLSCR3K7ERE1 68 aa11.82□□□□□ -0.52
VEGFA-206ENST00000372077 A0A0U1RQV1 116 aa11.81□□□□□ -0.52
VEGFA-206ENST00000372077 C1orf195Q5TG92 126 aa11.8□□□□□ -0.52
VEGFA-206ENST00000372077 NDUFC2O95298 119 aa11.79□□□□□ -0.52
VEGFA-206ENST00000372077 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
VEGFA-206ENST00000372077 RBM3P98179 157 aaKnown RBP11.78□□□□□ -0.52
VEGFA-206ENST00000372077 GHRHP01286 108 aa11.78□□□□□ -0.52
VEGFA-206ENST00000372077 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
VEGFA-206ENST00000372077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-206ENST00000372077 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
VEGFA-206ENST00000372077 A0A096LNI7 61 aa11.74□□□□□ -0.53
VEGFA-206ENST00000372077 FAT2Q9NYQ8 4349 aa11.74□□□□□ -0.53
VEGFA-206ENST00000372077 RYR2Q92736 4967 aa11.74□□□□□ -0.53
VEGFA-206ENST00000372077 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-206ENST00000372077 FUSP35637 526 aaKnown RBP eCLIP11.74□□□□□ -0.533e-8■□□□□ 10.5
VEGFA-206ENST00000372077 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
VEGFA-206ENST00000372077 SRRM2Q9UQ35 2752 aaKnown RBP11.74□□□□□ -0.53
VEGFA-206ENST00000372077 IGLV6-57P01721 117 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 BRK1Q8WUW1 75 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 VPREB1P12018 145 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 Q8N9L7 120 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 LINC00167Q96N53 147 aa11.73□□□□□ -0.53
VEGFA-206ENST00000372077 KMT2CQ8NEZ4 4911 aaKnown RBP11.72□□□□□ -0.53
VEGFA-206ENST00000372077 C20orf197Q8N268 126 aa11.72□□□□□ -0.53
VEGFA-206ENST00000372077 RPL37AP8A6NKH3 93 aa11.72□□□□□ -0.53
VEGFA-206ENST00000372077 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
VEGFA-206ENST00000372077 KRTAP10-2P60368 255 aa11.71□□□□□ -0.53
VEGFA-206ENST00000372077 Q6ZQT0 140 aa11.71□□□□□ -0.53
VEGFA-206ENST00000372077 HECTD4Q9Y4D8 3996 aa11.71□□□□□ -0.53
VEGFA-206ENST00000372077 SERTAD4-AS1Q5TG53 156 aa11.69□□□□□ -0.54
VEGFA-206ENST00000372077 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
VEGFA-206ENST00000372077 FP248Q71RG6 208 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-206ENST00000372077 FAM168BA1KXE4 195 aa11.68□□□□□ -0.54
VEGFA-206ENST00000372077 COX7BP24311 80 aa11.68□□□□□ -0.54
VEGFA-206ENST00000372077 KRTAP7-1Q8IUC3 87 aa11.68□□□□□ -0.54
VEGFA-206ENST00000372077 IGLV5-37A0A075B6J1 123 aa11.68□□□□□ -0.54
VEGFA-206ENST00000372077 CHTF8P0CG12 524 aa11.68□□□□□ -0.54
VEGFA-206ENST00000372077 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
VEGFA-206ENST00000372077 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
VEGFA-206ENST00000372077 Q6ZVQ6 151 aa11.66□□□□□ -0.54
VEGFA-206ENST00000372077 M0R378 163 aa11.66□□□□□ -0.54
VEGFA-206ENST00000372077 PANO1I0J062 215 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms