RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 M0R378 163 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 VPREB1P12018 145 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 XAGE1AQ9HD64 81 aa9.24□□□□□ -0.93
LDB3-204ENST00000372066 PKHD1P08F94 4074 aa9.23□□□□□ -0.93
LDB3-204ENST00000372066 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
LDB3-204ENST00000372066 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
LDB3-204ENST00000372066 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
LDB3-204ENST00000372066 hADV29S1A0JD25 119 aa9.22□□□□□ -0.93
LDB3-204ENST00000372066 GHRHP01286 108 aa9.22□□□□□ -0.93
LDB3-204ENST00000372066 SDIM1Q6ZPB5 146 aa9.22□□□□□ -0.93
LDB3-204ENST00000372066 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.93
LDB3-204ENST00000372066 TTC32Q5I0X7 151 aa9.21□□□□□ -0.93
LDB3-204ENST00000372066 SLPIP03973 132 aa9.2□□□□□ -0.94
LDB3-204ENST00000372066 Q6ZR54 194 aa9.2□□□□□ -0.94
LDB3-204ENST00000372066 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
LDB3-204ENST00000372066 GAGE2AQ6NT46 116 aa9.2□□□□□ -0.94
LDB3-204ENST00000372066 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
LDB3-204ENST00000372066 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
LDB3-204ENST00000372066 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
LDB3-204ENST00000372066 COX7BP24311 80 aa9.18□□□□□ -0.94
LDB3-204ENST00000372066 Q6ZRP5 223 aa9.18□□□□□ -0.94
LDB3-204ENST00000372066 C14orf132Q9NPU4 83 aa9.18□□□□□ -0.94
LDB3-204ENST00000372066 PKD1P98161 4303 aa9.18□□□□□ -0.94
LDB3-204ENST00000372066 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
LDB3-204ENST00000372066 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
LDB3-204ENST00000372066 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
LDB3-204ENST00000372066 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
LDB3-204ENST00000372066 CCKP06307 115 aa9.15□□□□□ -0.95
LDB3-204ENST00000372066 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.95
LDB3-204ENST00000372066 IGLV5-37A0A075B6J1 123 aa9.14□□□□□ -0.95
LDB3-204ENST00000372066 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
LDB3-204ENST00000372066 ABCA13Q86UQ4 5058 aa9.14□□□□□ -0.95
LDB3-204ENST00000372066 SMCR5Q8TEV8 140 aa9.13□□□□□ -0.95
LDB3-204ENST00000372066 PDE6GP18545 87 aa9.12□□□□□ -0.95
LDB3-204ENST00000372066 TNP2Q05952 138 aa9.12□□□□□ -0.95
LDB3-204ENST00000372066 Q6ZQY7 126 aa9.12□□□□□ -0.95
LDB3-204ENST00000372066 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
LDB3-204ENST00000372066 C16orf90A8MZG2 172 aa9.11□□□□□ -0.95
LDB3-204ENST00000372066 LINC00528Q8N1L1 170 aa9.11□□□□□ -0.95
LDB3-204ENST00000372066 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
LDB3-204ENST00000372066 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
LDB3-204ENST00000372066 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
LDB3-204ENST00000372066 Q6JHZ5 121 aa9.1□□□□□ -0.95
LDB3-204ENST00000372066 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
LDB3-204ENST00000372066 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
LDB3-204ENST00000372066 HSPG2P98160 4391 aa9.09□□□□□ -0.95
LDB3-204ENST00000372066 PRYO14603 147 aa9.08□□□□□ -0.96
LDB3-204ENST00000372066 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
LDB3-204ENST00000372066 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
LDB3-204ENST00000372066 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
LDB3-204ENST00000372066 ATP5EP2Q5VTU8 51 aa9.07□□□□□ -0.96
LDB3-204ENST00000372066 LINC00846Q9NV44 126 aa9.07□□□□□ -0.96
LDB3-204ENST00000372066 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
LDB3-204ENST00000372066 CDK2AP2O75956 126 aa9.06□□□□□ -0.96
LDB3-204ENST00000372066 Q6ZQT0 140 aa9.06□□□□□ -0.96
LDB3-204ENST00000372066 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
LDB3-204ENST00000372066 DSCR8Q96T75 97 aa9.05□□□□□ -0.96
LDB3-204ENST00000372066 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
LDB3-204ENST00000372066 PSCAO43653 123 aa9.03□□□□□ -0.96
LDB3-204ENST00000372066 DHRS4-AS1Q9P1J3 65 aa9.03□□□□□ -0.96
LDB3-204ENST00000372066 IGLV1-50A0A075B6I6 118 aa9.03□□□□□ -0.96
LDB3-204ENST00000372066 B5MCH6 92 aa9.03□□□□□ -0.96
LDB3-204ENST00000372066 SPRR1AP35321 89 aa9.03□□□□□ -0.96
LDB3-204ENST00000372066 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
LDB3-204ENST00000372066 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
LDB3-204ENST00000372066 UBL5Q9BZL1 73 aa9.02□□□□□ -0.97
LDB3-204ENST00000372066 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
LDB3-204ENST00000372066 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
LDB3-204ENST00000372066 Q6ZRX8 168 aa9□□□□□ -0.97
LDB3-204ENST00000372066 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
LDB3-204ENST00000372066 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
LDB3-204ENST00000372066 Q8N1X5 172 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 UQCRQO14949 82 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
LDB3-204ENST00000372066 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
LDB3-204ENST00000372066 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
LDB3-204ENST00000372066 ATOX1O00244 68 aa8.97□□□□□ -0.97
LDB3-204ENST00000372066 KRTAP10-2P60368 255 aa8.96□□□□□ -0.97
LDB3-204ENST00000372066 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.97
LDB3-204ENST00000372066 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.97
LDB3-204ENST00000372066 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.97
LDB3-204ENST00000372066 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.97
LDB3-204ENST00000372066 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
LDB3-204ENST00000372066 RPL37AP8A6NKH3 93 aa8.95□□□□□ -0.98
LDB3-204ENST00000372066 A0A096LNI7 61 aa8.93□□□□□ -0.98
LDB3-204ENST00000372066 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
LDB3-204ENST00000372066 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
LDB3-204ENST00000372066 COX7CP15954 63 aa8.92□□□□□ -0.98
LDB3-204ENST00000372066 A0A1B0GW54 56 aa8.91□□□□□ -0.98
LDB3-204ENST00000372066 Q9BRP9 147 aa8.91□□□□□ -0.98
LDB3-204ENST00000372066 Q6ZVQ6 151 aa8.9□□□□□ -0.98
LDB3-204ENST00000372066 Q8N377 158 aa8.9□□□□□ -0.98
LDB3-204ENST00000372066 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms