RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.18
TSPAN1-201ENST00000372003 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.18
TSPAN1-201ENST00000372003 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
TSPAN1-201ENST00000372003 CLPSL2Q6UWE3 100 aa7.65□□□□□ -1.18
TSPAN1-201ENST00000372003 DNAH7Q8WXX0 4024 aa7.64□□□□□ -1.19
TSPAN1-201ENST00000372003 ERC2-IT1O76042 136 aa7.64□□□□□ -1.19
TSPAN1-201ENST00000372003 Q8NDZ9 215 aa7.64□□□□□ -1.19
TSPAN1-201ENST00000372003 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
TSPAN1-201ENST00000372003 HAMPP81172 84 aa7.63□□□□□ -1.19
TSPAN1-201ENST00000372003 APLNQ9ULZ1 77 aa7.63□□□□□ -1.19
TSPAN1-201ENST00000372003 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
TSPAN1-201ENST00000372003 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
TSPAN1-201ENST00000372003 Q6ZQY7 126 aa7.63□□□□□ -1.19
TSPAN1-201ENST00000372003 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
TSPAN1-201ENST00000372003 PRR34Q9NV39 138 aa7.62□□□□□ -1.19
TSPAN1-201ENST00000372003 SMIM26A0A096LP01 95 aa7.61□□□□□ -1.19
TSPAN1-201ENST00000372003 A0A096LPF7 62 aa7.61□□□□□ -1.19
TSPAN1-201ENST00000372003 LELP1Q5T871 98 aa7.61□□□□□ -1.19
TSPAN1-201ENST00000372003 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
TSPAN1-201ENST00000372003 STARD9Q9P2P6 4700 aa7.61□□□□□ -1.19
TSPAN1-201ENST00000372003 COX7BP24311 80 aa7.6□□□□□ -1.19
TSPAN1-201ENST00000372003 H3BNG1 76 aa7.6□□□□□ -1.19
TSPAN1-201ENST00000372003 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
TSPAN1-201ENST00000372003 HRCT1Q6UXD1 115 aa7.6□□□□□ -1.19
TSPAN1-201ENST00000372003 IGLV10-54A0A075B6I4 117 aa7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 M0R2N4 97 aa7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 ZNF73O43830 326 aaPredicted RBP7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 LY6G6CO95867 125 aa7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 C10orf25Q5T742 122 aa7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 Q8N3U1 123 aa7.59□□□□□ -1.19
TSPAN1-201ENST00000372003 ESRGQ1W209 222 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 UBE2DNLQ8IWF7 75 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 A0A1B0GW54 56 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 F8WEM9 126 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 M0R378 163 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
TSPAN1-201ENST00000372003 NREPQ16612 68 aa7.55□□□□□ -1.2
TSPAN1-201ENST00000372003 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
TSPAN1-201ENST00000372003 RMI2Q96E14 147 aa7.55□□□□□ -1.2
TSPAN1-201ENST00000372003 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
TSPAN1-201ENST00000372003 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
TSPAN1-201ENST00000372003 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
TSPAN1-201ENST00000372003 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
TSPAN1-201ENST00000372003 VPREB1P12018 145 aa7.53□□□□□ -1.2
TSPAN1-201ENST00000372003 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
TSPAN1-201ENST00000372003 LCE6AA0A183 80 aa7.52□□□□□ -1.2
TSPAN1-201ENST00000372003 BPY2O14599 106 aa7.52□□□□□ -1.2
TSPAN1-201ENST00000372003 SNURFQ9Y675 71 aa7.52□□□□□ -1.2
TSPAN1-201ENST00000372003 TMEM254Q8TBM7 123 aa7.52□□□□□ -1.21
TSPAN1-201ENST00000372003 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
TSPAN1-201ENST00000372003 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 A0A0U1RQV1 116 aa7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 IGKV4-1P06312 121 aa7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
TSPAN1-201ENST00000372003 LYSTQ99698 3801 aa7.48□□□□□ -1.21
TSPAN1-201ENST00000372003 SEC61GP60059 68 aa7.48□□□□□ -1.21
TSPAN1-201ENST00000372003 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
TSPAN1-201ENST00000372003 HIGD2BQ4VC39 106 aa7.47□□□□□ -1.21
TSPAN1-201ENST00000372003 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.21
TSPAN1-201ENST00000372003 PRYO14603 147 aa7.46□□□□□ -1.21
TSPAN1-201ENST00000372003 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
TSPAN1-201ENST00000372003 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
TSPAN1-201ENST00000372003 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
TSPAN1-201ENST00000372003 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
TSPAN1-201ENST00000372003 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
TSPAN1-201ENST00000372003 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
TSPAN1-201ENST00000372003 Q6ZRU5 148 aa7.42□□□□□ -1.22
TSPAN1-201ENST00000372003 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
TSPAN1-201ENST00000372003 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
TSPAN1-201ENST00000372003 DNAH10OSP0CZ25 163 aa7.41□□□□□ -1.22
TSPAN1-201ENST00000372003 FUSP35637 526 aaKnown RBP eCLIP7.41□□□□□ -1.22
TSPAN1-201ENST00000372003 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
TSPAN1-201ENST00000372003 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
TSPAN1-201ENST00000372003 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
TSPAN1-201ENST00000372003 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.22
TSPAN1-201ENST00000372003 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.22
TSPAN1-201ENST00000372003 Q6ZR54 194 aa7.4□□□□□ -1.22
TSPAN1-201ENST00000372003 SACSQ9NZJ4 4579 aa7.4□□□□□ -1.23
TSPAN1-201ENST00000372003 TLX1NBP0CAT3 122 aa7.39□□□□□ -1.23
TSPAN1-201ENST00000372003 Q8N377 158 aa7.39□□□□□ -1.23
TSPAN1-201ENST00000372003 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
TSPAN1-201ENST00000372003 DNAH1Q9P2D7 4330 aa7.39□□□□□ -1.23
TSPAN1-201ENST00000372003 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
TSPAN1-201ENST00000372003 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
TSPAN1-201ENST00000372003 LINC00474Q9P2X8 69 aa7.38□□□□□ -1.23
TSPAN1-201ENST00000372003 V9GYY9 64 aa7.38□□□□□ -1.23
TSPAN1-201ENST00000372003 KMT2AQ03164 3969 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 TNP2Q05952 138 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 C1orf134Q5TEV5 83 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 Q6ZRP5 223 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
TSPAN1-201ENST00000372003 RYR2Q92736 4967 aa7.36□□□□□ -1.23
TSPAN1-201ENST00000372003 Q8N9L7 120 aa7.36□□□□□ -1.23
TSPAN1-201ENST00000372003 SPRR1AP35321 89 aa7.35□□□□□ -1.23
TSPAN1-201ENST00000372003 Q6ZRX8 168 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms