RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 PLNP26678 52 aa5.7□□□□□ -1.5
TUBE1-201ENST00000368657 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
TUBE1-201ENST00000368657 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
TUBE1-201ENST00000368657 UBE2AP49459 152 aa5.69□□□□□ -1.5
TUBE1-201ENST00000368657 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
TUBE1-201ENST00000368657 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
TUBE1-201ENST00000368657 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BKO60814 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 DPM2O94777 84 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 IGKCP01834 107 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BJP06899 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 VPREB1P12018 145 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BOP23527 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BBP33778 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BDP58876 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HERVK_113P61574 105 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BCP62807 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HERV-K104P63124 156 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST2H2BEQ16778 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BHQ93079 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BNQ99877 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 HIST1H2BMQ99879 126 aa5.68□□□□□ -1.5
TUBE1-201ENST00000368657 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 LEPROTO15243 131 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 TSPEAR-AS2P59090 65 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 PCOTHQ58A44 107 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 MIR7-3HGQ8N6C7 128 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 Q8NDZ9 215 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
TUBE1-201ENST00000368657 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
TUBE1-201ENST00000368657 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
TUBE1-201ENST00000368657 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
TUBE1-201ENST00000368657 FAM19A1Q7Z5A9 133 aa5.66□□□□□ -1.5
TUBE1-201ENST00000368657 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
TUBE1-201ENST00000368657 J3QQQ9 107 aa5.65□□□□□ -1.5
TUBE1-201ENST00000368657 NCR3O14931 201 aa5.65□□□□□ -1.5
TUBE1-201ENST00000368657 PRLHP81277 87 aa5.65□□□□□ -1.5
TUBE1-201ENST00000368657 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
TUBE1-201ENST00000368657 TMEM126AQ9H061 195 aa5.65□□□□□ -1.5
TUBE1-201ENST00000368657 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
TUBE1-201ENST00000368657 M0R378 163 aa5.64□□□□□ -1.51
TUBE1-201ENST00000368657 NMUP48645 174 aa5.62□□□□□ -1.51
TUBE1-201ENST00000368657 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
TUBE1-201ENST00000368657 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
TUBE1-201ENST00000368657 KRTDAPP60985 99 aa5.61□□□□□ -1.51
TUBE1-201ENST00000368657 NPC2P61916 151 aa5.61□□□□□ -1.51
TUBE1-201ENST00000368657 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
TUBE1-201ENST00000368657 KRTAP13-1Q8IUC0 172 aa5.61□□□□□ -1.51
TUBE1-201ENST00000368657 HIGD2AQ9BW72 106 aa5.61□□□□□ -1.51
TUBE1-201ENST00000368657 E9PLD3 99 aa5.6□□□□□ -1.51
TUBE1-201ENST00000368657 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
TUBE1-201ENST00000368657 A0A0J9YXY3 114 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 PRYO14603 147 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 SPINK1P00995 79 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 C3orf79P0CE67 100 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 S100A12P80511 92 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 LINC01545Q5VT33 79 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
TUBE1-201ENST00000368657 ETDCA0A1B0GVM5 59 aa5.58□□□□□ -1.52
TUBE1-201ENST00000368657 S100A7L2Q5SY68 101 aa5.58□□□□□ -1.52
TUBE1-201ENST00000368657 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
TUBE1-201ENST00000368657 C20orf202A1L168 122 aa5.57□□□□□ -1.52
TUBE1-201ENST00000368657 DDTP30046 118 aa5.57□□□□□ -1.52
TUBE1-201ENST00000368657 COA6Q5JTJ3 125 aaKnown RBP5.57□□□□□ -1.52
TUBE1-201ENST00000368657 ADAMTSL4-AS1Q5T5F5 129 aa5.57□□□□□ -1.52
TUBE1-201ENST00000368657 SPANXB1Q9NS25 103 aaPredicted RBP5.57□□□□□ -1.52
TUBE1-201ENST00000368657 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
TUBE1-201ENST00000368657 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
TUBE1-201ENST00000368657 TTTY13Q9BZ97 58 aa5.56□□□□□ -1.52
TUBE1-201ENST00000368657 KCNQ1DNQ9H478 68 aa5.56□□□□□ -1.52
TUBE1-201ENST00000368657 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 TRBV10-2A0A0K0K1G8 114 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 B5MCH6 92 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 S100A1P23297 94 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 SOSTDC1Q6X4U4 206 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
TUBE1-201ENST00000368657 NDUFC2O95298 119 aa5.54□□□□□ -1.52
TUBE1-201ENST00000368657 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
TUBE1-201ENST00000368657 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
TUBE1-201ENST00000368657 S100A2P29034 98 aa5.53□□□□□ -1.52
TUBE1-201ENST00000368657 SPRR1AP35321 89 aa5.53□□□□□ -1.52
TUBE1-201ENST00000368657 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
TUBE1-201ENST00000368657 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
TUBE1-201ENST00000368657 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
TUBE1-201ENST00000368657 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
TUBE1-201ENST00000368657 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
TUBE1-201ENST00000368657 LINC00308Q8TCZ7 52 aa5.52□□□□□ -1.53
TUBE1-201ENST00000368657 LITAFQ99732 161 aa5.52□□□□□ -1.53
TUBE1-201ENST00000368657 SLC25A20O43772 301 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 TIMM17BO60830 172 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 S100A6P06703 90 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 Q8NBF4 154 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
TUBE1-201ENST00000368657 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
TUBE1-201ENST00000368657 Q6ZRX8 168 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms