RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
TPM3-212ENST00000368533 FAM229BQ4G0N7 80 aa7.14□□□□□ -1.27
TPM3-212ENST00000368533 SCXQ7RTU7 201 aa7.14□□□□□ -1.27
TPM3-212ENST00000368533 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
TPM3-212ENST00000368533 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
TPM3-212ENST00000368533 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
TPM3-212ENST00000368533 HIGD2BQ4VC39 106 aa7.13□□□□□ -1.27
TPM3-212ENST00000368533 V9GYY9 64 aa7.13□□□□□ -1.27
TPM3-212ENST00000368533 FBN3Q75N90 2809 aa7.13□□□□□ -1.27
TPM3-212ENST00000368533 EPM2AB3EWF7 344 aa7.13□□□□□ -1.27
TPM3-212ENST00000368533 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 KIAA0087Q14695 138 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 C10orf25Q5T742 122 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 UBL5Q9BZL1 73 aa7.12□□□□□ -1.27
TPM3-212ENST00000368533 B9D2Q9BPU9 175 aa7.11□□□□□ -1.27
TPM3-212ENST00000368533 TRAV7A0A075B6U4 112 aa7.1□□□□□ -1.27
TPM3-212ENST00000368533 COX17Q14061 63 aa7.09□□□□□ -1.27
TPM3-212ENST00000368533 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
TPM3-212ENST00000368533 Q8N814 137 aa7.09□□□□□ -1.27
TPM3-212ENST00000368533 LRCOL1A6NCL2 159 aa7.08□□□□□ -1.28
TPM3-212ENST00000368533 CASC10Q5T4H9 136 aa7.08□□□□□ -1.28
TPM3-212ENST00000368533 H3BNG1 76 aa7.07□□□□□ -1.28
TPM3-212ENST00000368533 Q8NDZ9 215 aa7.07□□□□□ -1.28
TPM3-212ENST00000368533 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
TPM3-212ENST00000368533 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
TPM3-212ENST00000368533 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
TPM3-212ENST00000368533 LAMTOR3Q9UHA4 124 aa7.07□□□□□ -1.28
TPM3-212ENST00000368533 UBE2DNLQ8IWF7 75 aa7.06□□□□□ -1.28
TPM3-212ENST00000368533 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
TPM3-212ENST00000368533 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
TPM3-212ENST00000368533 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
TPM3-212ENST00000368533 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
TPM3-212ENST00000368533 ATP5EP2Q5VTU8 51 aa7.05□□□□□ -1.28
TPM3-212ENST00000368533 Q8N9L7 120 aa7.04□□□□□ -1.28
TPM3-212ENST00000368533 Q6ZVQ6 151 aa7.04□□□□□ -1.28
TPM3-212ENST00000368533 CAMK2N2Q96S95 79 aa7.04□□□□□ -1.28
TPM3-212ENST00000368533 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
TPM3-212ENST00000368533 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
TPM3-212ENST00000368533 TRBV10-3A0A0K0K1G6 114 aa7.02□□□□□ -1.29
TPM3-212ENST00000368533 LINC00575Q6W349 94 aa7.02□□□□□ -1.29
TPM3-212ENST00000368533 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
TPM3-212ENST00000368533 Q6ZQY7 126 aa7.01□□□□□ -1.29
TPM3-212ENST00000368533 Q6ZQT0 140 aa7.01□□□□□ -1.29
TPM3-212ENST00000368533 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
TPM3-212ENST00000368533 KMT2AQ03164 3969 aa7□□□□□ -1.29
TPM3-212ENST00000368533 DNAH10OSP0CZ25 163 aa7□□□□□ -1.29
TPM3-212ENST00000368533 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
TPM3-212ENST00000368533 C15orf56Q8N910 161 aa7□□□□□ -1.29
TPM3-212ENST00000368533 APLNQ9ULZ1 77 aa7□□□□□ -1.29
TPM3-212ENST00000368533 Q6ZRU5 148 aa6.99□□□□□ -1.29
TPM3-212ENST00000368533 TRBV7-4A0A0J9YYF1 115 aa6.99□□□□□ -1.29
TPM3-212ENST00000368533 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
TPM3-212ENST00000368533 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
TPM3-212ENST00000368533 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
TPM3-212ENST00000368533 NREPQ16612 68 aa6.98□□□□□ -1.29
TPM3-212ENST00000368533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.98□□□□□ -1.29
TPM3-212ENST00000368533 FUSP35637 526 aaKnown RBP eCLIP6.97□□□□□ -1.29
TPM3-212ENST00000368533 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
TPM3-212ENST00000368533 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.29
TPM3-212ENST00000368533 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
TPM3-212ENST00000368533 COX7BP24311 80 aa6.96□□□□□ -1.3
TPM3-212ENST00000368533 PSCAO43653 123 aa6.96□□□□□ -1.3
TPM3-212ENST00000368533 BPY2O14599 106 aa6.95□□□□□ -1.3
TPM3-212ENST00000368533 MUC7Q8TAX7 377 aa6.95□□□□□ -1.3
TPM3-212ENST00000368533 HIGD2AQ9BW72 106 aa6.95□□□□□ -1.3
TPM3-212ENST00000368533 DYNC2H1Q8NCM8 4307 aaKnown RBP6.95□□□□□ -1.3
TPM3-212ENST00000368533 PSPHP1O15172 72 aa6.94□□□□□ -1.3
TPM3-212ENST00000368533 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
TPM3-212ENST00000368533 A8MU10 97 aa6.94□□□□□ -1.3
TPM3-212ENST00000368533 PMAIP1Q13794 54 aa6.93□□□□□ -1.3
TPM3-212ENST00000368533 PRR4Q16378 134 aa6.93□□□□□ -1.3
TPM3-212ENST00000368533 NUPR2A6NF83 97 aa6.92□□□□□ -1.3
TPM3-212ENST00000368533 NDUFC1O43677 76 aa6.92□□□□□ -1.3
TPM3-212ENST00000368533 SYCNQ0VAF6 134 aa6.92□□□□□ -1.3
TPM3-212ENST00000368533 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 M0R378 163 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 VPREB1P12018 145 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 Q6ZRP5 223 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 PRYO14603 147 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 NKAPP1Q8N9T2 125 aa6.91□□□□□ -1.3
TPM3-212ENST00000368533 BCE1O60756 84 aa6.9□□□□□ -1.31
TPM3-212ENST00000368533 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 LOC110117498A0A087WWA1 95 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 LY6G6CO95867 125 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 CXCL6P80162 114 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
TPM3-212ENST00000368533 ELOF1P60002 83 aaKnown RBP6.88□□□□□ -1.31
TPM3-212ENST00000368533 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
TPM3-212ENST00000368533 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
TPM3-212ENST00000368533 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
TPM3-212ENST00000368533 C3orf84H3BNL1 204 aa6.87□□□□□ -1.31
TPM3-212ENST00000368533 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
TPM3-212ENST00000368533 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
TPM3-212ENST00000368533 PDE6GP18545 87 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms