RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 J3QQQ9 107 aa11.46□□□□□ -0.57
CD47-202ENST00000361309 HSBP1O75506 76 aa11.45□□□□□ -0.58
CD47-202ENST00000361309 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
CD47-202ENST00000361309 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
CD47-202ENST00000361309 APOC3P02656 99 aa11.43□□□□□ -0.58
CD47-202ENST00000361309 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
CD47-202ENST00000361309 EIF4EBP3O60516 100 aaPredicted RBP11.42□□□□□ -0.58
CD47-202ENST00000361309 LORP23490 312 aaPredicted RBP11.42□□□□□ -0.58
CD47-202ENST00000361309 NMUP48645 174 aa11.42□□□□□ -0.58
CD47-202ENST00000361309 NPC2P61916 151 aa11.42□□□□□ -0.58
CD47-202ENST00000361309 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
CD47-202ENST00000361309 PLNP26678 52 aa11.41□□□□□ -0.58
CD47-202ENST00000361309 KRTAP10-6P60371 365 aaPredicted RBP11.41□□□□□ -0.58
CD47-202ENST00000361309 SPRR1BP22528 89 aa11.4□□□□□ -0.58
CD47-202ENST00000361309 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
CD47-202ENST00000361309 HERVK_113P61574 105 aa11.4□□□□□ -0.58
CD47-202ENST00000361309 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
CD47-202ENST00000361309 LEPROTL1O95214 131 aa11.39□□□□□ -0.59
CD47-202ENST00000361309 SNAPINO95295 136 aa11.39□□□□□ -0.59
CD47-202ENST00000361309 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
CD47-202ENST00000361309 DPM2O94777 84 aa11.37□□□□□ -0.59
CD47-202ENST00000361309 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
CD47-202ENST00000361309 SVBPQ8N300 66 aa11.37□□□□□ -0.59
CD47-202ENST00000361309 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
CD47-202ENST00000361309 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
CD47-202ENST00000361309 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
CD47-202ENST00000361309 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
CD47-202ENST00000361309 IGKCP01834 107 aa11.34□□□□□ -0.59
CD47-202ENST00000361309 NDUFA5Q16718 116 aa11.34□□□□□ -0.59
CD47-202ENST00000361309 LINC00310P59036 64 aa11.33□□□□□ -0.6
CD47-202ENST00000361309 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
CD47-202ENST00000361309 M0R2T5 61 aa11.32□□□□□ -0.6
CD47-202ENST00000361309 OR13C6PQ8NH95 151 aa11.32□□□□□ -0.6
CD47-202ENST00000361309 SERF1AO75920 110 aa11.31□□□□□ -0.6
CD47-202ENST00000361309 FABP4P15090 132 aa11.31□□□□□ -0.6
CD47-202ENST00000361309 HSPB8Q9UJY1 196 aa11.3□□□□□ -0.6
CD47-202ENST00000361309 H7C2G1 150 aa11.29□□□□□ -0.6
CD47-202ENST00000361309 CD164Q04900 197 aa11.29□□□□□ -0.6
CD47-202ENST00000361309 FLGP20930 4061 aaPredicted RBP11.29□□□□□ -0.6
CD47-202ENST00000361309 Q1RN00 199 aa11.28□□□□□ -0.6
CD47-202ENST00000361309 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
CD47-202ENST00000361309 TRGC2P03986 189 aa11.27□□□□□ -0.61
CD47-202ENST00000361309 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.61
CD47-202ENST00000361309 PRO1933Q9H354 126 aa11.27□□□□□ -0.61
CD47-202ENST00000361309 E9PLD3 99 aa11.26□□□□□ -0.61
CD47-202ENST00000361309 TAL2Q16559 108 aa11.26□□□□□ -0.61
CD47-202ENST00000361309 DEFB105AQ8NG35 78 aa11.26□□□□□ -0.61
CD47-202ENST00000361309 COX6B2Q6YFQ2 88 aa11.25□□□□□ -0.61
CD47-202ENST00000361309 COX7BP24311 80 aa11.24□□□□□ -0.61
CD47-202ENST00000361309 ELOF1P60002 83 aaKnown RBP11.24□□□□□ -0.61
CD47-202ENST00000361309 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
CD47-202ENST00000361309 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
CD47-202ENST00000361309 LITAFQ99732 161 aa11.24□□□□□ -0.61
CD47-202ENST00000361309 Q5XG85 94 aa11.23□□□□□ -0.61
CD47-202ENST00000361309 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
CD47-202ENST00000361309 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
CD47-202ENST00000361309 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.61
CD47-202ENST00000361309 AKR1D1P51857 326 aa11.2□□□□□ -0.62
CD47-202ENST00000361309 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
CD47-202ENST00000361309 TIMM17BO60830 172 aa11.18□□□□□ -0.62
CD47-202ENST00000361309 SMIM29Q86T20 159 aa11.18□□□□□ -0.62
CD47-202ENST00000361309 LINC00518Q8N0U6 118 aa11.15□□□□□ -0.62
CD47-202ENST00000361309 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
CD47-202ENST00000361309 ZNF815PA8K554 130 aa11.11□□□□□ -0.63
CD47-202ENST00000361309 IGLV5-48A0A075B6I7 105 aa11.1□□□□□ -0.63
CD47-202ENST00000361309 TTTY13Q9BZ97 58 aa11.1□□□□□ -0.63
CD47-202ENST00000361309 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
CD47-202ENST00000361309 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
CD47-202ENST00000361309 TCL1BO95988 128 aa11.06□□□□□ -0.64
CD47-202ENST00000361309 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
CD47-202ENST00000361309 Q6Q795 121 aa11.03□□□□□ -0.64
CD47-202ENST00000361309 A6NDN8 102 aa11.02□□□□□ -0.65
CD47-202ENST00000361309 COLCA2A8K830 154 aa11□□□□□ -0.65
CD47-202ENST00000361309 A4D1N5 150 aa10.98□□□□□ -0.65
CD47-202ENST00000361309 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
CD47-202ENST00000361309 SCGB1D4Q6XE38 83 aa10.98□□□□□ -0.65
CD47-202ENST00000361309 KRTAP9-7A8MTY7 169 aa10.97□□□□□ -0.65
CD47-202ENST00000361309 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.97□□□□□ -0.65
CD47-202ENST00000361309 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
CD47-202ENST00000361309 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
CD47-202ENST00000361309 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.65
CD47-202ENST00000361309 IFITM1P13164 125 aa10.95□□□□□ -0.66
CD47-202ENST00000361309 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
CD47-202ENST00000361309 F8WEM9 126 aa10.94□□□□□ -0.66
CD47-202ENST00000361309 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
CD47-202ENST00000361309 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
CD47-202ENST00000361309 OBSCN-AS1Q96MR7 158 aa10.93□□□□□ -0.66
CD47-202ENST00000361309 Q75L30 129 aa10.92□□□□□ -0.66
CD47-202ENST00000361309 C3orf79P0CE67 100 aa10.91□□□□□ -0.66
CD47-202ENST00000361309 USH2AO75445 5202 aa10.91□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms