RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
PPARGC1B-202ENST00000360453 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
PPARGC1B-202ENST00000360453 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
PPARGC1B-202ENST00000360453 KMT2BQ9UMN6 2715 aaPredicted RBP8.84□□□□□ -0.99
PPARGC1B-202ENST00000360453 J3QKU1 62 aa8.84□□□□□ -0.99
PPARGC1B-202ENST00000360453 M0R378 163 aa8.84□□□□□ -0.99
PPARGC1B-202ENST00000360453 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
PPARGC1B-202ENST00000360453 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
PPARGC1B-202ENST00000360453 FAM168BA1KXE4 195 aa8.83□□□□□ -1
PPARGC1B-202ENST00000360453 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
PPARGC1B-202ENST00000360453 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
PPARGC1B-202ENST00000360453 CXCL6P80162 114 aa8.82□□□□□ -1
PPARGC1B-202ENST00000360453 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
PPARGC1B-202ENST00000360453 EGFEM1PQ0D2K5 195 aa8.82□□□□□ -1
PPARGC1B-202ENST00000360453 PDE6GP18545 87 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 NREPQ16612 68 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 A0A0G2JQZ4 141 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 A0A1W2PNN7 141 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 CASC10Q5T4H9 136 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 NKAPP1Q8N9T2 125 aa8.8□□□□□ -1
PPARGC1B-202ENST00000360453 KRTAP10-11P60412 298 aa8.79□□□□□ -1
PPARGC1B-202ENST00000360453 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
PPARGC1B-202ENST00000360453 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
PPARGC1B-202ENST00000360453 C7orf33Q8WU49 177 aa8.79□□□□□ -1
PPARGC1B-202ENST00000360453 SYCNQ0VAF6 134 aa8.78□□□□□ -1
PPARGC1B-202ENST00000360453 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
PPARGC1B-202ENST00000360453 KLKP1Q107X0 134 aa8.78□□□□□ -1
PPARGC1B-202ENST00000360453 Q8N377 158 aa8.78□□□□□ -1
PPARGC1B-202ENST00000360453 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
PPARGC1B-202ENST00000360453 TRBV7-6A0A0J9YX20 115 aa8.76□□□□□ -1.01
PPARGC1B-202ENST00000360453 DEFB131BA0A096LNP1 70 aa8.75□□□□□ -1.01
PPARGC1B-202ENST00000360453 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
PPARGC1B-202ENST00000360453 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
PPARGC1B-202ENST00000360453 HIGD2AQ9BW72 106 aa8.74□□□□□ -1.01
PPARGC1B-202ENST00000360453 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
PPARGC1B-202ENST00000360453 Q9BRP9 147 aa8.73□□□□□ -1.01
PPARGC1B-202ENST00000360453 LYSTQ99698 3801 aa8.73□□□□□ -1.01
PPARGC1B-202ENST00000360453 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
PPARGC1B-202ENST00000360453 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
PPARGC1B-202ENST00000360453 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
PPARGC1B-202ENST00000360453 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
PPARGC1B-202ENST00000360453 FAM229BQ4G0N7 80 aa8.71□□□□□ -1.01
PPARGC1B-202ENST00000360453 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.01
PPARGC1B-202ENST00000360453 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
PPARGC1B-202ENST00000360453 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
PPARGC1B-202ENST00000360453 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
PPARGC1B-202ENST00000360453 H3BQ85 93 aa8.7□□□□□ -1.02
PPARGC1B-202ENST00000360453 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
PPARGC1B-202ENST00000360453 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
PPARGC1B-202ENST00000360453 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
PPARGC1B-202ENST00000360453 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
PPARGC1B-202ENST00000360453 ETDCA0A1B0GVM5 59 aa8.68□□□□□ -1.02
PPARGC1B-202ENST00000360453 KRTAP7-1Q8IUC3 87 aa8.68□□□□□ -1.02
PPARGC1B-202ENST00000360453 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
PPARGC1B-202ENST00000360453 UBE2BP63146 152 aa8.68□□□□□ -1.02
PPARGC1B-202ENST00000360453 OCR1Q9BZK8 76 aa8.68□□□□□ -1.02
PPARGC1B-202ENST00000360453 LINC01556Q5JQF7 62 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 BCE1O60756 84 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 MGAM2Q2M2H8 2515 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 Q6ZRX8 168 aa8.67□□□□□ -1.02
PPARGC1B-202ENST00000360453 EPM2AB3EWF7 344 aa8.66□□□□□ -1.02
PPARGC1B-202ENST00000360453 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■■■□ 20.2
PPARGC1B-202ENST00000360453 PRR4Q16378 134 aa8.65□□□□□ -1.02
PPARGC1B-202ENST00000360453 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
PPARGC1B-202ENST00000360453 PRYO14603 147 aa8.64□□□□□ -1.03
PPARGC1B-202ENST00000360453 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
PPARGC1B-202ENST00000360453 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
PPARGC1B-202ENST00000360453 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
PPARGC1B-202ENST00000360453 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
PPARGC1B-202ENST00000360453 K7EQZ3 153 aa8.63□□□□□ -1.03
PPARGC1B-202ENST00000360453 H3BNG1 76 aa8.62□□□□□ -1.03
PPARGC1B-202ENST00000360453 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
PPARGC1B-202ENST00000360453 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
PPARGC1B-202ENST00000360453 PRLHP81277 87 aa8.62□□□□□ -1.03
PPARGC1B-202ENST00000360453 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1B-202ENST00000360453 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
PPARGC1B-202ENST00000360453 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
PPARGC1B-202ENST00000360453 NDUFC1O43677 76 aa8.59□□□□□ -1.03
PPARGC1B-202ENST00000360453 DSCR10P59022 87 aa8.59□□□□□ -1.03
PPARGC1B-202ENST00000360453 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
PPARGC1B-202ENST00000360453 WIPF1O43516 503 aa8.59□□□□□ -1.04
PPARGC1B-202ENST00000360453 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
PPARGC1B-202ENST00000360453 Q8NBF4 154 aa8.58□□□□□ -1.04
PPARGC1B-202ENST00000360453 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
PPARGC1B-202ENST00000360453 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
PPARGC1B-202ENST00000360453 TNP2Q05952 138 aa8.57□□□□□ -1.04
PPARGC1B-202ENST00000360453 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
PPARGC1B-202ENST00000360453 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
PPARGC1B-202ENST00000360453 LINC00476Q8WZB0 136 aa8.56□□□□□ -1.04
PPARGC1B-202ENST00000360453 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
PPARGC1B-202ENST00000360453 KRTAP24-1Q3LI83 254 aa8.56□□□□□ -1.04
PPARGC1B-202ENST00000360453 A0A096LNI7 61 aa8.55□□□□□ -1.04
PPARGC1B-202ENST00000360453 SPRR1AP35321 89 aa8.54□□□□□ -1.04
PPARGC1B-202ENST00000360453 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
PPARGC1B-202ENST00000360453 A0A087WSZ3 146 aa8.53□□□□□ -1.04
PPARGC1B-202ENST00000360453 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
PPARGC1B-202ENST00000360453 PSCAO43653 123 aa8.52□□□□□ -1.05
PPARGC1B-202ENST00000360453 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms