RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
NFIX-201ENST00000358552 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
NFIX-201ENST00000358552 TRBV10-3A0A0K0K1G6 114 aa8.63□□□□□ -1.03
NFIX-201ENST00000358552 NCR3O14931 201 aa8.63□□□□□ -1.03
NFIX-201ENST00000358552 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
NFIX-201ENST00000358552 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
NFIX-201ENST00000358552 C6orf99Q4VX62 202 aa8.63□□□□□ -1.03
NFIX-201ENST00000358552 NKAPP1Q8N9T2 125 aa8.63□□□□□ -1.03
NFIX-201ENST00000358552 Q6ZR54 194 aa8.62□□□□□ -1.03
NFIX-201ENST00000358552 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
NFIX-201ENST00000358552 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
NFIX-201ENST00000358552 LINC00846Q9NV44 126 aa8.62□□□□□ -1.03
NFIX-201ENST00000358552 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
NFIX-201ENST00000358552 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
NFIX-201ENST00000358552 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
NFIX-201ENST00000358552 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
NFIX-201ENST00000358552 COX7CP15954 63 aa8.61□□□□□ -1.03
NFIX-201ENST00000358552 RBM3P98179 157 aaKnown RBP8.61□□□□□ -1.03
NFIX-201ENST00000358552 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
NFIX-201ENST00000358552 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
NFIX-201ENST00000358552 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
NFIX-201ENST00000358552 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
NFIX-201ENST00000358552 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
NFIX-201ENST00000358552 DIRC1Q969H9 104 aa8.6□□□□□ -1.03
NFIX-201ENST00000358552 Q8NDZ9 215 aa8.6□□□□□ -1.03
NFIX-201ENST00000358552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.59□□□□□ -1.03
NFIX-201ENST00000358552 C9orf163Q8N9P6 203 aa8.59□□□□□ -1.03
NFIX-201ENST00000358552 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
NFIX-201ENST00000358552 BCE1O60756 84 aa8.57□□□□□ -1.04
NFIX-201ENST00000358552 C1orf134Q5TEV5 83 aa8.57□□□□□ -1.04
NFIX-201ENST00000358552 DSCR8Q96T75 97 aa8.57□□□□□ -1.04
NFIX-201ENST00000358552 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
NFIX-201ENST00000358552 LAMTOR3Q9UHA4 124 aa8.57□□□□□ -1.04
NFIX-201ENST00000358552 CRYGAP11844 174 aa8.56□□□□□ -1.04
NFIX-201ENST00000358552 LINC00476Q8WZB0 136 aa8.56□□□□□ -1.04
NFIX-201ENST00000358552 LY6G6CO95867 125 aa8.55□□□□□ -1.04
NFIX-201ENST00000358552 COX7BP24311 80 aa8.55□□□□□ -1.04
NFIX-201ENST00000358552 SERP2Q8N6R1 65 aa8.55□□□□□ -1.04
NFIX-201ENST00000358552 VPS13DQ5THJ4 4388 aa8.55□□□□□ -1.04
NFIX-201ENST00000358552 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
NFIX-201ENST00000358552 M0R2N4 97 aa8.54□□□□□ -1.04
NFIX-201ENST00000358552 PRYO14603 147 aa8.54□□□□□ -1.04
NFIX-201ENST00000358552 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
NFIX-201ENST00000358552 A0A087WTM6 91 aa8.54□□□□□ -1.04
NFIX-201ENST00000358552 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
NFIX-201ENST00000358552 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
NFIX-201ENST00000358552 Q6ZQT0 140 aa8.53□□□□□ -1.04
NFIX-201ENST00000358552 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
NFIX-201ENST00000358552 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
NFIX-201ENST00000358552 SERTAD4-AS1Q5TG53 156 aa8.52□□□□□ -1.05
NFIX-201ENST00000358552 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
NFIX-201ENST00000358552 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
NFIX-201ENST00000358552 Q6ZQY7 126 aa8.5□□□□□ -1.05
NFIX-201ENST00000358552 A0A096LNI7 61 aa8.49□□□□□ -1.05
NFIX-201ENST00000358552 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
NFIX-201ENST00000358552 SPRR1AP35321 89 aa8.49□□□□□ -1.05
NFIX-201ENST00000358552 CXCL6P80162 114 aa8.49□□□□□ -1.05
NFIX-201ENST00000358552 ALMS1Q8TCU4 4167 aa8.48□□□□□ -1.05
NFIX-201ENST00000358552 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
NFIX-201ENST00000358552 TMEM258P61165 79 aa8.47□□□□□ -1.05
NFIX-201ENST00000358552 FAM19A5Q7Z5A7 132 aaPredicted RBP8.47□□□□□ -1.05
NFIX-201ENST00000358552 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
NFIX-201ENST00000358552 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
NFIX-201ENST00000358552 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
NFIX-201ENST00000358552 FAM168BA1KXE4 195 aa8.46□□□□□ -1.06
NFIX-201ENST00000358552 TRBV7-4A0A0J9YYF1 115 aa8.45□□□□□ -1.06
NFIX-201ENST00000358552 A0A1B0GW54 56 aa8.45□□□□□ -1.06
NFIX-201ENST00000358552 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
NFIX-201ENST00000358552 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
NFIX-201ENST00000358552 LCE6AA0A183 80 aa8.44□□□□□ -1.06
NFIX-201ENST00000358552 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
NFIX-201ENST00000358552 RTL8CO15255 209 aa8.43□□□□□ -1.06
NFIX-201ENST00000358552 Q6ZRX8 168 aa8.43□□□□□ -1.06
NFIX-201ENST00000358552 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
NFIX-201ENST00000358552 EPM2AB3EWF7 344 aa8.43□□□□□ -1.06
NFIX-201ENST00000358552 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
NFIX-201ENST00000358552 A0A087WVE0 104 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 RPL37AP8A6NKH3 93 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 J3KT08 172 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 Q6ZVQ6 151 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
NFIX-201ENST00000358552 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
NFIX-201ENST00000358552 SPACA4Q8TDM5 124 aa8.41□□□□□ -1.06
NFIX-201ENST00000358552 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
NFIX-201ENST00000358552 HAMPP81172 84 aa8.4□□□□□ -1.06
NFIX-201ENST00000358552 H0Y9J4 135 aa8.4□□□□□ -1.07
NFIX-201ENST00000358552 UBE2BP63146 152 aa8.4□□□□□ -1.07
NFIX-201ENST00000358552 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
NFIX-201ENST00000358552 FAM19A1Q7Z5A9 133 aa8.37□□□□□ -1.07
NFIX-201ENST00000358552 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
NFIX-201ENST00000358552 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
NFIX-201ENST00000358552 TNP2Q05952 138 aa8.35□□□□□ -1.07
NFIX-201ENST00000358552 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
NFIX-201ENST00000358552 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.08
NFIX-201ENST00000358552 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
NFIX-201ENST00000358552 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
NFIX-201ENST00000358552 NDUFC1O43677 76 aa8.33□□□□□ -1.08
NFIX-201ENST00000358552 LINC00336Q6ZUF6 198 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms