RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NREPQ16612 68 aa11.62□□□□□ -0.55
RTN4-204ENST00000357732 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
RTN4-204ENST00000357732 NKAPP1Q8N9T2 125 aa11.61□□□□□ -0.55
RTN4-204ENST00000357732 TM2D3Q9BRN9 247 aa11.61□□□□□ -0.55
RTN4-204ENST00000357732 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
RTN4-204ENST00000357732 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
RTN4-204ENST00000357732 SCXQ7RTU7 201 aa11.61□□□□□ -0.55
RTN4-204ENST00000357732 ESRGQ1W209 222 aa11.6□□□□□ -0.55
RTN4-204ENST00000357732 RMI2Q96E14 147 aa11.6□□□□□ -0.55
RTN4-204ENST00000357732 DHRS4-AS1Q9P1J3 65 aa11.6□□□□□ -0.55
RTN4-204ENST00000357732 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
RTN4-204ENST00000357732 F8WEM9 126 aa11.59□□□□□ -0.55
RTN4-204ENST00000357732 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
RTN4-204ENST00000357732 Q6ZTC4 211 aa11.59□□□□□ -0.55
RTN4-204ENST00000357732 OXLD1Q5BKU9 147 aa11.59□□□□□ -0.55
RTN4-204ENST00000357732 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
RTN4-204ENST00000357732 C4orf26Q17RF5 130 aa11.57□□□□□ -0.56
RTN4-204ENST00000357732 KRTAP10-11P60412 298 aa11.56□□□□□ -0.56
RTN4-204ENST00000357732 TMEM254Q8TBM7 123 aa11.56□□□□□ -0.56
RTN4-204ENST00000357732 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
RTN4-204ENST00000357732 Q8N377 158 aa11.55□□□□□ -0.56
RTN4-204ENST00000357732 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
RTN4-204ENST00000357732 PRYO14603 147 aa11.55□□□□□ -0.56
RTN4-204ENST00000357732 SMIM26A0A096LP01 95 aa11.54□□□□□ -0.56
RTN4-204ENST00000357732 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
RTN4-204ENST00000357732 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.561e-8■□□□□ 8.2
RTN4-204ENST00000357732 OCR1Q9BZK8 76 aa11.54□□□□□ -0.56
RTN4-204ENST00000357732 Q6ZRX8 168 aa11.53□□□□□ -0.56
RTN4-204ENST00000357732 SERTAD4-AS1Q5TG53 156 aa11.52□□□□□ -0.57
RTN4-204ENST00000357732 SPRR1AP35321 89 aa11.51□□□□□ -0.57
RTN4-204ENST00000357732 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
RTN4-204ENST00000357732 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
RTN4-204ENST00000357732 DEFB131BA0A096LNP1 70 aa11.5□□□□□ -0.57
RTN4-204ENST00000357732 PKD1L1Q8TDX9 2849 aa11.5□□□□□ -0.57
RTN4-204ENST00000357732 ANK2Q01484 3957 aa11.49□□□□□ -0.57
RTN4-204ENST00000357732 TNP2Q05952 138 aa11.49□□□□□ -0.57
RTN4-204ENST00000357732 A0A0U1RQV1 116 aa11.48□□□□□ -0.57
RTN4-204ENST00000357732 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
RTN4-204ENST00000357732 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
RTN4-204ENST00000357732 C3orf84H3BNL1 204 aa11.48□□□□□ -0.57
RTN4-204ENST00000357732 Q8N9L7 120 aa11.47□□□□□ -0.57
RTN4-204ENST00000357732 DEFB105AQ8NG35 78 aa11.47□□□□□ -0.57
RTN4-204ENST00000357732 ETDCA0A1B0GVM5 59 aa11.46□□□□□ -0.57
RTN4-204ENST00000357732 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.57
RTN4-204ENST00000357732 Q8NBF4 154 aa11.45□□□□□ -0.58
RTN4-204ENST00000357732 SPRR4Q96PI1 79 aa11.45□□□□□ -0.58
RTN4-204ENST00000357732 Q9BRP9 147 aa11.45□□□□□ -0.58
RTN4-204ENST00000357732 C1orf137Q5JT78 98 aa11.44□□□□□ -0.58
RTN4-204ENST00000357732 A0A1W2PNM2 257 aa11.43□□□□□ -0.58
RTN4-204ENST00000357732 TENM3Q9P273 2699 aa11.42□□□□□ -0.58
RTN4-204ENST00000357732 LCE6AA0A183 80 aa11.41□□□□□ -0.58
RTN4-204ENST00000357732 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
RTN4-204ENST00000357732 CMYA5Q8N3K9 4069 aa11.41□□□□□ -0.58
RTN4-204ENST00000357732 RPL37AP8A6NKH3 93 aa11.39□□□□□ -0.59
RTN4-204ENST00000357732 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
RTN4-204ENST00000357732 KRTAP24-1Q3LI83 254 aa11.36□□□□□ -0.59
RTN4-204ENST00000357732 BAHCC1Q9P281 2608 aa11.36□□□□□ -0.59
RTN4-204ENST00000357732 SMIM29Q86T20 159 aa11.35□□□□□ -0.59
RTN4-204ENST00000357732 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
RTN4-204ENST00000357732 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
RTN4-204ENST00000357732 PRO0628Q9UI54 55 aa11.34□□□□□ -0.59
RTN4-204ENST00000357732 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
RTN4-204ENST00000357732 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
RTN4-204ENST00000357732 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
RTN4-204ENST00000357732 FBN1P35555 2871 aaKnown RBP11.33□□□□□ -0.6
RTN4-204ENST00000357732 DSCR10P59022 87 aa11.32□□□□□ -0.6
RTN4-204ENST00000357732 UBE2BP63146 152 aa11.32□□□□□ -0.6
RTN4-204ENST00000357732 REG3GQ6UW15 175 aa11.32□□□□□ -0.6
RTN4-204ENST00000357732 DNAH3Q8TD57 4116 aa11.31□□□□□ -0.6
RTN4-204ENST00000357732 CASC10Q5T4H9 136 aa11.3□□□□□ -0.6
RTN4-204ENST00000357732 FAM30AQ9NZY2 134 aa11.29□□□□□ -0.6
RTN4-204ENST00000357732 LINC00336Q6ZUF6 198 aa11.28□□□□□ -0.6
RTN4-204ENST00000357732 F8P00451 2351 aa11.27□□□□□ -0.61
RTN4-204ENST00000357732 STAB1Q9NY15 2570 aa11.27□□□□□ -0.61
RTN4-204ENST00000357732 ZCCHC13Q8WW36 166 aaKnown RBP11.27□□□□□ -0.61
RTN4-204ENST00000357732 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
RTN4-204ENST00000357732 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
RTN4-204ENST00000357732 LINC00476Q8WZB0 136 aa11.26□□□□□ -0.61
RTN4-204ENST00000357732 K7EQZ3 153 aa11.25□□□□□ -0.61
RTN4-204ENST00000357732 HCG22E2RYF7 251 aa11.25□□□□□ -0.61
RTN4-204ENST00000357732 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
RTN4-204ENST00000357732 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
RTN4-204ENST00000357732 DNAH1Q9P2D7 4330 aa11.22□□□□□ -0.61
RTN4-204ENST00000357732 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.62
RTN4-204ENST00000357732 IGFL1Q6UW32 110 aa11.21□□□□□ -0.62
RTN4-204ENST00000357732 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
RTN4-204ENST00000357732 PSCAO43653 123 aa11.2□□□□□ -0.62
RTN4-204ENST00000357732 MAST4O15021 2626 aa11.19□□□□□ -0.62
RTN4-204ENST00000357732 hDV103S1A0JD37 113 aa11.19□□□□□ -0.62
RTN4-204ENST00000357732 NDUFB1O75438 58 aa11.19□□□□□ -0.62
RTN4-204ENST00000357732 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
RTN4-204ENST00000357732 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
RTN4-204ENST00000357732 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
RTN4-204ENST00000357732 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
RTN4-204ENST00000357732 H0Y9J4 135 aa11.14□□□□□ -0.63
RTN4-204ENST00000357732 A0A096LNI7 61 aa11.13□□□□□ -0.63
RTN4-204ENST00000357732 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
RTN4-204ENST00000357732 SPRR1BP22528 89 aa11.12□□□□□ -0.63
RTN4-204ENST00000357732 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
RTN4-204ENST00000357732 MP68P56378 58 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms