RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SPAG11AQ6PDA7 123 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 C11orf45Q8TAV5 145 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 A0A096LNT2 108 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
TRIM38-201ENST00000357085 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
TRIM38-201ENST00000357085 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
TRIM38-201ENST00000357085 A0A087WSZ3 146 aa4.38□□□□□ -1.71
TRIM38-201ENST00000357085 K7EQZ3 153 aa4.38□□□□□ -1.71
TRIM38-201ENST00000357085 MAPK1IP1LQ8NDC0 245 aa4.38□□□□□ -1.71
TRIM38-201ENST00000357085 M0R2N4 97 aa4.38□□□□□ -1.71
TRIM38-201ENST00000357085 UTP20O75691 2785 aaKnown RBP4.37□□□□□ -1.71
TRIM38-201ENST00000357085 Q5VV11 94 aa4.37□□□□□ -1.71
TRIM38-201ENST00000357085 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
TRIM38-201ENST00000357085 DEFB4AO15263 64 aa4.37□□□□□ -1.71
TRIM38-201ENST00000357085 C5orf42Q9H799 3197 aa4.36□□□□□ -1.71
TRIM38-201ENST00000357085 TEP1Q99973 2627 aaKnown RBP4.36□□□□□ -1.71
TRIM38-201ENST00000357085 NBEAQ8NFP9 2946 aa4.36□□□□□ -1.71
TRIM38-201ENST00000357085 X6R8D5 127 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 ITPR1Q14643 2758 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 FAM229AH3BQW9 127 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 H3BS24 57 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 LINC00476Q8WZB0 136 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 UQCR11O14957 56 aa4.35□□□□□ -1.71
TRIM38-201ENST00000357085 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
TRIM38-201ENST00000357085 A0A1B0GU69 56 aa4.34□□□□□ -1.71
TRIM38-201ENST00000357085 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.71
TRIM38-201ENST00000357085 A0A1W2PPR1 153 aa4.34□□□□□ -1.71
TRIM38-201ENST00000357085 C16orf90A8MZG2 172 aa4.34□□□□□ -1.72
TRIM38-201ENST00000357085 COL6A5A8TX70 2615 aa4.34□□□□□ -1.72
TRIM38-201ENST00000357085 CFAP46Q8IYW2 2715 aa4.33□□□□□ -1.72
TRIM38-201ENST00000357085 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
TRIM38-201ENST00000357085 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
TRIM38-201ENST00000357085 Q8N9P0 234 aaPredicted RBP4.33□□□□□ -1.72
TRIM38-201ENST00000357085 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
TRIM38-201ENST00000357085 IGSF10Q6WRI0 2623 aa4.33□□□□□ -1.72
TRIM38-201ENST00000357085 ST20-AS1Q8NBB2 130 aa4.32□□□□□ -1.72
TRIM38-201ENST00000357085 C15orf56Q8N910 161 aa4.31□□□□□ -1.72
TRIM38-201ENST00000357085 HTTP42858 3142 aa4.31□□□□□ -1.72
TRIM38-201ENST00000357085 APCP25054 2843 aa4.3□□□□□ -1.72
TRIM38-201ENST00000357085 Q8NAQ8 132 aa4.3□□□□□ -1.72
TRIM38-201ENST00000357085 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
TRIM38-201ENST00000357085 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
TRIM38-201ENST00000357085 TEX15Q9BXT5 2789 aa4.3□□□□□ -1.72
TRIM38-201ENST00000357085 NIPBLQ6KC79 2804 aaeCLIP4.3□□□□□ -1.72
TRIM38-201ENST00000357085 Q8N377 158 aa4.3□□□□□ -1.72
TRIM38-201ENST00000357085 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
TRIM38-201ENST00000357085 IGFL1Q6UW32 110 aa4.29□□□□□ -1.72
TRIM38-201ENST00000357085 DSCR10P59022 87 aa4.29□□□□□ -1.72
TRIM38-201ENST00000357085 NSD1Q96L73 2696 aaPredicted RBP4.28□□□□□ -1.72
TRIM38-201ENST00000357085 CNBPP62633 177 aaKnown RBP4.28□□□□□ -1.72
TRIM38-201ENST00000357085 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
TRIM38-201ENST00000357085 SPRR1AP35321 89 aa4.28□□□□□ -1.72
TRIM38-201ENST00000357085 A6NN06 94 aa4.27□□□□□ -1.73
TRIM38-201ENST00000357085 A0A1W2PNM2 257 aa4.27□□□□□ -1.73
TRIM38-201ENST00000357085 C19orf73Q9NVV2 129 aa4.27□□□□□ -1.73
TRIM38-201ENST00000357085 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
TRIM38-201ENST00000357085 MGAM2Q2M2H8 2515 aa4.26□□□□□ -1.73
TRIM38-201ENST00000357085 SPRR1BP22528 89 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 TNP2Q05952 138 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
TRIM38-201ENST00000357085 LAMA2P24043 3122 aaKnown RBP4.25□□□□□ -1.73
TRIM38-201ENST00000357085 C8orf17Q9NRJ1 99 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 A0A096LNI7 61 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 LINC00313P59037 77 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 NUPR2A6NF83 97 aa4.25□□□□□ -1.73
TRIM38-201ENST00000357085 CFAP54Q96N23 3096 aa4.24□□□□□ -1.73
TRIM38-201ENST00000357085 ITPR2Q14571 2701 aa4.24□□□□□ -1.73
TRIM38-201ENST00000357085 Q8NDZ9 215 aa4.24□□□□□ -1.73
TRIM38-201ENST00000357085 PRLHP81277 87 aa4.23□□□□□ -1.73
TRIM38-201ENST00000357085 Q6ZR54 194 aa4.23□□□□□ -1.73
TRIM38-201ENST00000357085 STAB2Q8WWQ8 2551 aa4.22□□□□□ -1.73
TRIM38-201ENST00000357085 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
TRIM38-201ENST00000357085 J3QKU1 62 aa4.2□□□□□ -1.74
TRIM38-201ENST00000357085 C9orf163Q8N9P6 203 aa4.2□□□□□ -1.74
TRIM38-201ENST00000357085 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
TRIM38-201ENST00000357085 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
TRIM38-201ENST00000357085 FLNBO75369 2602 aaKnown RBP4.2□□□□□ -1.74
TRIM38-201ENST00000357085 HRNRQ86YZ3 2850 aaPredicted RBP4.19□□□□□ -1.74
TRIM38-201ENST00000357085 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
TRIM38-201ENST00000357085 STAB1Q9NY15 2570 aa4.19□□□□□ -1.74
TRIM38-201ENST00000357085 DMAC1Q96GE9 116 aa4.18□□□□□ -1.74
TRIM38-201ENST00000357085 LINC00472Q9H8W2 130 aa4.18□□□□□ -1.74
TRIM38-201ENST00000357085 SPINK7P58062 85 aa4.18□□□□□ -1.74
TRIM38-201ENST00000357085 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
TRIM38-201ENST00000357085 FAM168BA1KXE4 195 aa4.17□□□□□ -1.74
TRIM38-201ENST00000357085 TACC2O95359 2948 aa4.17□□□□□ -1.74
TRIM38-201ENST00000357085 MMP24-AS1A0A0U1RRL7 71 aa4.17□□□□□ -1.74
TRIM38-201ENST00000357085 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
TRIM38-201ENST00000357085 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
TRIM38-201ENST00000357085 SSBP3-AS1Q7Z2R9 100 aa4.15□□□□□ -1.74
TRIM38-201ENST00000357085 PLA2G1BP04054 148 aaKnown RBP4.15□□□□□ -1.75
TRIM38-201ENST00000357085 HRES1P13985 223 aa4.14□□□□□ -1.75
TRIM38-201ENST00000357085 FRYQ5TBA9 3013 aa4.14□□□□□ -1.75
TRIM38-201ENST00000357085 A8MU10 97 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms