RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 COX17Q14061 63 aa10.17□□□□□ -0.78
PTBP1-203ENST00000356948 LINC00167Q96N53 147 aa10.17□□□□□ -0.78
PTBP1-203ENST00000356948 C3orf84H3BNL1 204 aa10.16□□□□□ -0.78
PTBP1-203ENST00000356948 PRR34Q9NV39 138 aa10.16□□□□□ -0.78
PTBP1-203ENST00000356948 DNAH10Q8IVF4 4471 aa10.16□□□□□ -0.78
PTBP1-203ENST00000356948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
PTBP1-203ENST00000356948 NREPQ16612 68 aa10.14□□□□□ -0.79
PTBP1-203ENST00000356948 KPRPQ5T749 579 aaPredicted RBP10.14□□□□□ -0.79
PTBP1-203ENST00000356948 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
PTBP1-203ENST00000356948 PSPHP1O15172 72 aa10.13□□□□□ -0.79
PTBP1-203ENST00000356948 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
PTBP1-203ENST00000356948 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.798e-7■■□□□ 13.8
PTBP1-203ENST00000356948 A0A0J9YWU9 116 aa10.12□□□□□ -0.79
PTBP1-203ENST00000356948 BPY2O14599 106 aa10.12□□□□□ -0.79
PTBP1-203ENST00000356948 Q6ZRU5 148 aa10.12□□□□□ -0.79
PTBP1-203ENST00000356948 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
PTBP1-203ENST00000356948 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
PTBP1-203ENST00000356948 ESRGQ1W209 222 aa10.11□□□□□ -0.79
PTBP1-203ENST00000356948 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
PTBP1-203ENST00000356948 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
PTBP1-203ENST00000356948 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
PTBP1-203ENST00000356948 Q6ZQT0 140 aa10.09□□□□□ -0.79
PTBP1-203ENST00000356948 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
PTBP1-203ENST00000356948 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
PTBP1-203ENST00000356948 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
PTBP1-203ENST00000356948 FAM30AQ9NZY2 134 aa10.08□□□□□ -0.8
PTBP1-203ENST00000356948 Q6ZRP5 223 aa10.06□□□□□ -0.8
PTBP1-203ENST00000356948 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
PTBP1-203ENST00000356948 ZNF73O43830 326 aaPredicted RBP10.06□□□□□ -0.8
PTBP1-203ENST00000356948 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
PTBP1-203ENST00000356948 CASC10Q5T4H9 136 aa10.05□□□□□ -0.8
PTBP1-203ENST00000356948 MGAM2Q2M2H8 2515 aa10.04□□□□□ -0.8
PTBP1-203ENST00000356948 VPREB1P12018 145 aa10.04□□□□□ -0.8
PTBP1-203ENST00000356948 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
PTBP1-203ENST00000356948 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
PTBP1-203ENST00000356948 KLKP1Q107X0 134 aa10.04□□□□□ -0.8
PTBP1-203ENST00000356948 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
PTBP1-203ENST00000356948 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.8
PTBP1-203ENST00000356948 SPTSSBQ8NFR3 76 aa10.01□□□□□ -0.81
PTBP1-203ENST00000356948 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
PTBP1-203ENST00000356948 PRYO14603 147 aa10.01□□□□□ -0.81
PTBP1-203ENST00000356948 NDUFC1O43677 76 aa10.01□□□□□ -0.81
PTBP1-203ENST00000356948 FAM168BA1KXE4 195 aa10□□□□□ -0.81
PTBP1-203ENST00000356948 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
PTBP1-203ENST00000356948 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
PTBP1-203ENST00000356948 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
PTBP1-203ENST00000356948 DNAH3Q8TD57 4116 aa10□□□□□ -0.81
PTBP1-203ENST00000356948 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
PTBP1-203ENST00000356948 COX7BP24311 80 aa9.99□□□□□ -0.81
PTBP1-203ENST00000356948 RPL37AP8A6NKH3 93 aa9.98□□□□□ -0.81
PTBP1-203ENST00000356948 DEFB131BA0A096LNP1 70 aa9.98□□□□□ -0.81
PTBP1-203ENST00000356948 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
PTBP1-203ENST00000356948 DNAH7Q8WXX0 4024 aa9.97□□□□□ -0.81
PTBP1-203ENST00000356948 KRTAP24-1Q3LI83 254 aa9.97□□□□□ -0.81
PTBP1-203ENST00000356948 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
PTBP1-203ENST00000356948 F8WDY8 70 aa9.95□□□□□ -0.82
PTBP1-203ENST00000356948 PDE6GP18545 87 aa9.95□□□□□ -0.82
PTBP1-203ENST00000356948 DEFB116Q30KQ4 102 aa9.95□□□□□ -0.82
PTBP1-203ENST00000356948 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
PTBP1-203ENST00000356948 PMAIP1Q13794 54 aa9.93□□□□□ -0.82
PTBP1-203ENST00000356948 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
PTBP1-203ENST00000356948 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
PTBP1-203ENST00000356948 CXCL6P80162 114 aa9.92□□□□□ -0.82
PTBP1-203ENST00000356948 M0R378 163 aa9.91□□□□□ -0.82
PTBP1-203ENST00000356948 TRBV7-4A0A0J9YYF1 115 aa9.91□□□□□ -0.82
PTBP1-203ENST00000356948 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
PTBP1-203ENST00000356948 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
PTBP1-203ENST00000356948 A0A0G2JQZ4 141 aa9.9□□□□□ -0.82
PTBP1-203ENST00000356948 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
PTBP1-203ENST00000356948 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.82
PTBP1-203ENST00000356948 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.82
PTBP1-203ENST00000356948 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
PTBP1-203ENST00000356948 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
PTBP1-203ENST00000356948 LINC00588Q9Y4M8 146 aa9.88□□□□□ -0.83
PTBP1-203ENST00000356948 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
PTBP1-203ENST00000356948 WFDC13Q8IUB5 93 aa9.87□□□□□ -0.83
PTBP1-203ENST00000356948 Q8N377 158 aa9.85□□□□□ -0.83
PTBP1-203ENST00000356948 Q9BRP9 147 aa9.85□□□□□ -0.83
PTBP1-203ENST00000356948 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
PTBP1-203ENST00000356948 H3BNG1 76 aa9.84□□□□□ -0.83
PTBP1-203ENST00000356948 ERC2-IT1O76042 136 aa9.84□□□□□ -0.83
PTBP1-203ENST00000356948 A8MUN3 132 aa9.83□□□□□ -0.84
PTBP1-203ENST00000356948 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
PTBP1-203ENST00000356948 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
PTBP1-203ENST00000356948 BCE1O60756 84 aa9.8□□□□□ -0.84
PTBP1-203ENST00000356948 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
PTBP1-203ENST00000356948 KCNQ1DNQ9H478 68 aa9.79□□□□□ -0.84
PTBP1-203ENST00000356948 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
PTBP1-203ENST00000356948 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
PTBP1-203ENST00000356948 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
PTBP1-203ENST00000356948 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
PTBP1-203ENST00000356948 KRTAP1-5Q9BYS1 174 aa9.76□□□□□ -0.85
PTBP1-203ENST00000356948 UBE2BP63146 152 aa9.76□□□□□ -0.85
PTBP1-203ENST00000356948 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
PTBP1-203ENST00000356948 IGKV2-24A0A0C4DH68 120 aa9.75□□□□□ -0.85
PTBP1-203ENST00000356948 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
PTBP1-203ENST00000356948 A8MU10 97 aa9.75□□□□□ -0.85
PTBP1-203ENST00000356948 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
PTBP1-203ENST00000356948 IGLV1-50A0A075B6I6 118 aa9.74□□□□□ -0.85
PTBP1-203ENST00000356948 OCR1Q9BZK8 76 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms