RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 LRP2P98164 4655 aa12.16□□□□□ -0.46
MRPL39-202ENST00000352957 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
MRPL39-202ENST00000352957 TRAV23DV6A0A075B6W5 121 aa12.15□□□□□ -0.46
MRPL39-202ENST00000352957 C3orf22Q8N5N4 141 aa12.15□□□□□ -0.46
MRPL39-202ENST00000352957 HIST1H2BLQ99880 126 aa12.15□□□□□ -0.46
MRPL39-202ENST00000352957 SPANXCQ9NY87 97 aa12.15□□□□□ -0.46
MRPL39-202ENST00000352957 S100A2P29034 98 aa12.14□□□□□ -0.47
MRPL39-202ENST00000352957 AKR1D1P51857 326 aa12.13□□□□□ -0.47
MRPL39-202ENST00000352957 SCGB1D4Q6XE38 83 aa12.13□□□□□ -0.47
MRPL39-202ENST00000352957 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
MRPL39-202ENST00000352957 PRR4Q16378 134 aa12.12□□□□□ -0.47
MRPL39-202ENST00000352957 Q6ZRX8 168 aa12.12□□□□□ -0.47
MRPL39-202ENST00000352957 Q9BRP9 147 aa12.12□□□□□ -0.47
MRPL39-202ENST00000352957 ERC2-IT1O76042 136 aa12.11□□□□□ -0.47
MRPL39-202ENST00000352957 PPDPFQ9H3Y8 114 aa12.11□□□□□ -0.47
MRPL39-202ENST00000352957 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
MRPL39-202ENST00000352957 S100A6P06703 90 aa12.1□□□□□ -0.47
MRPL39-202ENST00000352957 PCP2Q8IVA1 136 aa12.1□□□□□ -0.47
MRPL39-202ENST00000352957 OR13C6PQ8NH95 151 aa12.1□□□□□ -0.47
MRPL39-202ENST00000352957 SPANXDQ9BXN6 97 aa12.1□□□□□ -0.47
MRPL39-202ENST00000352957 SNRPEP62304 92 aaKnown RBP12.06□□□□□ -0.48
MRPL39-202ENST00000352957 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
MRPL39-202ENST00000352957 GAGE2AQ6NT46 116 aa12.06□□□□□ -0.48
MRPL39-202ENST00000352957 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
MRPL39-202ENST00000352957 JOSD1Q15040 202 aaPredicted RBP12.05□□□□□ -0.48
MRPL39-202ENST00000352957 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
MRPL39-202ENST00000352957 LPAP08519 4548 aa12.04□□□□□ -0.48
MRPL39-202ENST00000352957 IFITM1P13164 125 aa12.02□□□□□ -0.49
MRPL39-202ENST00000352957 HINT1P49773 126 aaPredicted RBP12.02□□□□□ -0.49
MRPL39-202ENST00000352957 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
MRPL39-202ENST00000352957 Q6ZVH6 145 aa12.01□□□□□ -0.49
MRPL39-202ENST00000352957 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
MRPL39-202ENST00000352957 RETNLBQ9BQ08 111 aa12.01□□□□□ -0.49
MRPL39-202ENST00000352957 MUSTN1Q8IVN3 82 aa12□□□□□ -0.49
MRPL39-202ENST00000352957 HSBP1L1C9JCN9 74 aa11.99□□□□□ -0.49
MRPL39-202ENST00000352957 CTAG1AP78358 180 aa11.99□□□□□ -0.49
MRPL39-202ENST00000352957 Q8NBF4 154 aa11.99□□□□□ -0.49
MRPL39-202ENST00000352957 IGLV9-49A0A0B4J1Y8 123 aa11.98□□□□□ -0.49
MRPL39-202ENST00000352957 C5orf52A6NGY3 159 aa11.98□□□□□ -0.49
MRPL39-202ENST00000352957 SPAG11AQ6PDA7 123 aa11.98□□□□□ -0.49
MRPL39-202ENST00000352957 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
MRPL39-202ENST00000352957 MOBPQ13875 183 aa11.96□□□□□ -0.49
MRPL39-202ENST00000352957 C6orf99Q4VX62 202 aa11.96□□□□□ -0.49
MRPL39-202ENST00000352957 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
MRPL39-202ENST00000352957 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
MRPL39-202ENST00000352957 COX7BP24311 80 aa11.94□□□□□ -0.5
MRPL39-202ENST00000352957 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
MRPL39-202ENST00000352957 A6NDN8 102 aa11.93□□□□□ -0.5
MRPL39-202ENST00000352957 DHRS4-AS1Q9P1J3 65 aa11.93□□□□□ -0.5
MRPL39-202ENST00000352957 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
MRPL39-202ENST00000352957 TRBV7-6A0A0J9YX20 115 aa11.88□□□□□ -0.51
MRPL39-202ENST00000352957 C9orf153Q5TBE3 101 aa11.88□□□□□ -0.51
MRPL39-202ENST00000352957 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
MRPL39-202ENST00000352957 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
MRPL39-202ENST00000352957 SPINK1P00995 79 aa11.87□□□□□ -0.51
MRPL39-202ENST00000352957 IGLV7-46A0A075B6I9 117 aa11.86□□□□□ -0.51
MRPL39-202ENST00000352957 SPRR1BP22528 89 aa11.86□□□□□ -0.51
MRPL39-202ENST00000352957 A0A1B0GWB2 263 aa11.84□□□□□ -0.51
MRPL39-202ENST00000352957 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
MRPL39-202ENST00000352957 A4D1N5 150 aa11.83□□□□□ -0.52
MRPL39-202ENST00000352957 COX8AP10176 69 aa11.83□□□□□ -0.52
MRPL39-202ENST00000352957 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
MRPL39-202ENST00000352957 TPRXLQ17RH7 258 aa11.81□□□□□ -0.52
MRPL39-202ENST00000352957 SLC25A34Q6PIV7 304 aa11.81□□□□□ -0.52
MRPL39-202ENST00000352957 DEFB105AQ8NG35 78 aa11.81□□□□□ -0.52
MRPL39-202ENST00000352957 TAL2Q16559 108 aa11.8□□□□□ -0.52
MRPL39-202ENST00000352957 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
MRPL39-202ENST00000352957 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
MRPL39-202ENST00000352957 LAMTOR3Q9UHA4 124 aa11.79□□□□□ -0.52
MRPL39-202ENST00000352957 DLEU1O43261 78 aa11.78□□□□□ -0.52
MRPL39-202ENST00000352957 FP248Q71RG6 208 aaPredicted RBP11.78□□□□□ -0.52
MRPL39-202ENST00000352957 PAM16Q9Y3D7 125 aa11.78□□□□□ -0.52
MRPL39-202ENST00000352957 Q8N377 158 aa11.77□□□□□ -0.53
MRPL39-202ENST00000352957 C14orf144Q96I85 54 aa11.77□□□□□ -0.53
MRPL39-202ENST00000352957 TEX49A0A1B0GTD5 131 aa11.76□□□□□ -0.53
MRPL39-202ENST00000352957 Q1RN00 199 aa11.76□□□□□ -0.53
MRPL39-202ENST00000352957 SPATA45Q537H7 98 aa11.76□□□□□ -0.53
MRPL39-202ENST00000352957 CDIP1Q9H305 208 aa11.76□□□□□ -0.53
MRPL39-202ENST00000352957 C12orf57Q99622 126 aa11.75□□□□□ -0.53
MRPL39-202ENST00000352957 LINC01547P58512 204 aaPredicted RBP11.74□□□□□ -0.53
MRPL39-202ENST00000352957 VAMP8Q9BV40 100 aa11.74□□□□□ -0.53
MRPL39-202ENST00000352957 IGLV5-48A0A075B6I7 105 aa11.73□□□□□ -0.53
MRPL39-202ENST00000352957 NHP2Q9NX24 153 aaKnown RBP11.73□□□□□ -0.53
MRPL39-202ENST00000352957 SLC25A20O43772 301 aa11.72□□□□□ -0.53
MRPL39-202ENST00000352957 LOC100996750A0A140TA64 210 aa11.71□□□□□ -0.53
MRPL39-202ENST00000352957 VAMP3Q15836 100 aa11.71□□□□□ -0.53
MRPL39-202ENST00000352957 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
MRPL39-202ENST00000352957 SMIM29Q86T20 159 aa11.71□□□□□ -0.53
MRPL39-202ENST00000352957 KRTAP4-6Q9BYQ5 205 aa11.71□□□□□ -0.53
MRPL39-202ENST00000352957 LINC00575Q6W349 94 aa11.69□□□□□ -0.54
MRPL39-202ENST00000352957 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
MRPL39-202ENST00000352957 LORP23490 312 aaPredicted RBP11.68□□□□□ -0.54
MRPL39-202ENST00000352957 KRTAP13-3Q3SY46 172 aa11.68□□□□□ -0.54
MRPL39-202ENST00000352957 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
MRPL39-202ENST00000352957 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
MRPL39-202ENST00000352957 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
MRPL39-202ENST00000352957 CFC1P0CG37 223 aa11.64□□□□□ -0.55
MRPL39-202ENST00000352957 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
MRPL39-202ENST00000352957 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
MRPL39-202ENST00000352957 TMA7Q9Y2S6 64 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms