RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
TRIM4-201ENST00000349062 H3BNG1 76 aa9.16□□□□□ -0.94
TRIM4-201ENST00000349062 NKAPP1Q8N9T2 125 aa9.16□□□□□ -0.94
TRIM4-201ENST00000349062 LYSTQ99698 3801 aa9.16□□□□□ -0.94
TRIM4-201ENST00000349062 TM2D3Q9BRN9 247 aa9.16□□□□□ -0.94
TRIM4-201ENST00000349062 RMI2Q96E14 147 aa9.15□□□□□ -0.94
TRIM4-201ENST00000349062 FAM236DA0A1B0GTK5 79 aa9.15□□□□□ -0.94
TRIM4-201ENST00000349062 NDUFC2O95298 119 aa9.15□□□□□ -0.94
TRIM4-201ENST00000349062 FAM236CP0DP71 79 aa9.15□□□□□ -0.94
TRIM4-201ENST00000349062 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
TRIM4-201ENST00000349062 DIRC1Q969H9 104 aa9.15□□□□□ -0.95
TRIM4-201ENST00000349062 NDUFC2-KCTD14E9PQ53 114 aa9.14□□□□□ -0.95
TRIM4-201ENST00000349062 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
TRIM4-201ENST00000349062 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
TRIM4-201ENST00000349062 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM4-201ENST00000349062 LINC01547P58512 204 aaPredicted RBP9.12□□□□□ -0.95
TRIM4-201ENST00000349062 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
TRIM4-201ENST00000349062 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
TRIM4-201ENST00000349062 HUWE1Q7Z6Z7 4374 aaKnown RBP9.11□□□□□ -0.95
TRIM4-201ENST00000349062 F8WEM9 126 aa9.1□□□□□ -0.95
TRIM4-201ENST00000349062 COX7BP24311 80 aa9.1□□□□□ -0.95
TRIM4-201ENST00000349062 Q6ZVQ6 151 aa9.1□□□□□ -0.95
TRIM4-201ENST00000349062 Q8N9L7 120 aa9.1□□□□□ -0.95
TRIM4-201ENST00000349062 VPREB1P12018 145 aa9.1□□□□□ -0.95
TRIM4-201ENST00000349062 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
TRIM4-201ENST00000349062 KRTAP1-5Q9BYS1 174 aa9.09□□□□□ -0.95
TRIM4-201ENST00000349062 IGLV6-57P01721 117 aa9.09□□□□□ -0.95
TRIM4-201ENST00000349062 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
TRIM4-201ENST00000349062 Q5XG85 94 aa9.09□□□□□ -0.95
TRIM4-201ENST00000349062 Q6ZQT0 140 aa9.08□□□□□ -0.96
TRIM4-201ENST00000349062 M0R378 163 aa9.07□□□□□ -0.96
TRIM4-201ENST00000349062 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
TRIM4-201ENST00000349062 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
TRIM4-201ENST00000349062 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
TRIM4-201ENST00000349062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.05□□□□□ -0.96
TRIM4-201ENST00000349062 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
TRIM4-201ENST00000349062 H7BZZ5 65 aa9.04□□□□□ -0.96
TRIM4-201ENST00000349062 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
TRIM4-201ENST00000349062 DNAH10Q8IVF4 4471 aa9.04□□□□□ -0.96
TRIM4-201ENST00000349062 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
TRIM4-201ENST00000349062 LINC00474Q9P2X8 69 aa9.03□□□□□ -0.96
TRIM4-201ENST00000349062 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
TRIM4-201ENST00000349062 LINC00167Q96N53 147 aa9.02□□□□□ -0.97
TRIM4-201ENST00000349062 C3orf84H3BNL1 204 aa9.02□□□□□ -0.97
TRIM4-201ENST00000349062 UBE2BP63146 152 aa9.02□□□□□ -0.97
TRIM4-201ENST00000349062 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
TRIM4-201ENST00000349062 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
TRIM4-201ENST00000349062 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
TRIM4-201ENST00000349062 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
TRIM4-201ENST00000349062 SERP1Q9Y6X1 66 aa8.99□□□□□ -0.97
TRIM4-201ENST00000349062 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
TRIM4-201ENST00000349062 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
TRIM4-201ENST00000349062 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
TRIM4-201ENST00000349062 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
TRIM4-201ENST00000349062 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
TRIM4-201ENST00000349062 A0A0G2JQZ4 141 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 A0A1W2PNN7 141 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 BPY2O14599 106 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 NREPQ16612 68 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 A0A096LNI7 61 aa8.96□□□□□ -0.97
TRIM4-201ENST00000349062 PRLHP81277 87 aa8.96□□□□□ -0.98
TRIM4-201ENST00000349062 TRBV7-6A0A0J9YX20 115 aa8.95□□□□□ -0.98
TRIM4-201ENST00000349062 B9D2Q9BPU9 175 aa8.95□□□□□ -0.98
TRIM4-201ENST00000349062 APLNQ9ULZ1 77 aa8.95□□□□□ -0.98
TRIM4-201ENST00000349062 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
TRIM4-201ENST00000349062 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
TRIM4-201ENST00000349062 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
TRIM4-201ENST00000349062 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
TRIM4-201ENST00000349062 DNHD1Q96M86 4753 aa8.93□□□□□ -0.98
TRIM4-201ENST00000349062 SMIM26A0A096LP01 95 aa8.92□□□□□ -0.98
TRIM4-201ENST00000349062 DNAH9Q9NYC9 4486 aa8.92□□□□□ -0.98
TRIM4-201ENST00000349062 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
TRIM4-201ENST00000349062 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
TRIM4-201ENST00000349062 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
TRIM4-201ENST00000349062 PDE6GP18545 87 aa8.91□□□□□ -0.98
TRIM4-201ENST00000349062 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
TRIM4-201ENST00000349062 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
TRIM4-201ENST00000349062 CXCL6P80162 114 aa8.9□□□□□ -0.98
TRIM4-201ENST00000349062 PHF5AQ7RTV0 110 aaKnown RBP8.9□□□□□ -0.98
TRIM4-201ENST00000349062 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.99
TRIM4-201ENST00000349062 PRR4Q16378 134 aa8.89□□□□□ -0.99
TRIM4-201ENST00000349062 Q9BRP9 147 aa8.88□□□□□ -0.99
TRIM4-201ENST00000349062 PRKDCP78527 4128 aaKnown RBP8.87□□□□□ -0.99
TRIM4-201ENST00000349062 IGLV1-50A0A075B6I6 118 aa8.87□□□□□ -0.99
TRIM4-201ENST00000349062 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
TRIM4-201ENST00000349062 PLECQ15149 4684 aaKnown RBP8.87□□□□□ -0.99
TRIM4-201ENST00000349062 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
TRIM4-201ENST00000349062 NBDYA0A0U1RRE5 68 aa8.86□□□□□ -0.99
TRIM4-201ENST00000349062 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
TRIM4-201ENST00000349062 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
TRIM4-201ENST00000349062 Q8N377 158 aa8.86□□□□□ -0.99
TRIM4-201ENST00000349062 Q6ZRX8 168 aa8.86□□□□□ -0.99
TRIM4-201ENST00000349062 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
TRIM4-201ENST00000349062 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
TRIM4-201ENST00000349062 LY6G6CO95867 125 aa8.84□□□□□ -0.99
TRIM4-201ENST00000349062 NUPR2A6NF83 97 aa8.83□□□□□ -1
TRIM4-201ENST00000349062 PANO1I0J062 215 aa8.82□□□□□ -1
TRIM4-201ENST00000349062 PRYO14603 147 aa8.82□□□□□ -1
TRIM4-201ENST00000349062 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms