RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 A0A087WVE0 104 aa8.51□□□□□ -1.05
CLK3-201ENST00000345005 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
CLK3-201ENST00000345005 TRAV7A0A075B6U4 112 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 RMI2Q96E14 147 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 Q6ZQT0 140 aa8.5□□□□□ -1.05
CLK3-201ENST00000345005 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
CLK3-201ENST00000345005 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
CLK3-201ENST00000345005 CXCL6P80162 114 aa8.48□□□□□ -1.05
CLK3-201ENST00000345005 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
CLK3-201ENST00000345005 C10orf25Q5T742 122 aa8.48□□□□□ -1.05
CLK3-201ENST00000345005 UBE2DNLQ8IWF7 75 aa8.48□□□□□ -1.05
CLK3-201ENST00000345005 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
CLK3-201ENST00000345005 LAMTOR3Q9UHA4 124 aa8.47□□□□□ -1.05
CLK3-201ENST00000345005 TRBV7-6A0A0J9YX20 115 aa8.47□□□□□ -1.05
CLK3-201ENST00000345005 IGLV6-57P01721 117 aa8.47□□□□□ -1.05
CLK3-201ENST00000345005 HIGD2BQ4VC39 106 aa8.47□□□□□ -1.05
CLK3-201ENST00000345005 PRR3P79522 188 aaKnown RBP8.46□□□□□ -1.06
CLK3-201ENST00000345005 CAMK2N2Q96S95 79 aa8.46□□□□□ -1.06
CLK3-201ENST00000345005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.45□□□□□ -1.06
CLK3-201ENST00000345005 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
CLK3-201ENST00000345005 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
CLK3-201ENST00000345005 H7BZZ5 65 aa8.44□□□□□ -1.06
CLK3-201ENST00000345005 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
CLK3-201ENST00000345005 DYNC2H1Q8NCM8 4307 aaKnown RBP8.42□□□□□ -1.06
CLK3-201ENST00000345005 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
CLK3-201ENST00000345005 Q6ZRU5 148 aa8.42□□□□□ -1.06
CLK3-201ENST00000345005 LINC00336Q6ZUF6 198 aa8.42□□□□□ -1.06
CLK3-201ENST00000345005 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
CLK3-201ENST00000345005 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
CLK3-201ENST00000345005 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
CLK3-201ENST00000345005 Q6ZVQ6 151 aa8.4□□□□□ -1.06
CLK3-201ENST00000345005 ERC2-IT1O76042 136 aa8.4□□□□□ -1.07
CLK3-201ENST00000345005 HAMPP81172 84 aa8.39□□□□□ -1.07
CLK3-201ENST00000345005 COX7BP24311 80 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 Q6ZQY7 126 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 CSMD3Q7Z407 3707 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 CASC10Q5T4H9 136 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
CLK3-201ENST00000345005 TRBV7-4A0A0J9YYF1 115 aa8.37□□□□□ -1.07
CLK3-201ENST00000345005 ZNF73O43830 326 aaPredicted RBP8.36□□□□□ -1.07
CLK3-201ENST00000345005 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
CLK3-201ENST00000345005 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
CLK3-201ENST00000345005 V9GYY9 64 aa8.36□□□□□ -1.07
CLK3-201ENST00000345005 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
CLK3-201ENST00000345005 PSCAO43653 123 aa8.35□□□□□ -1.07
CLK3-201ENST00000345005 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
CLK3-201ENST00000345005 DNAH7Q8WXX0 4024 aa8.35□□□□□ -1.07
CLK3-201ENST00000345005 M0R378 163 aa8.34□□□□□ -1.07
CLK3-201ENST00000345005 Q8NDZ9 215 aa8.34□□□□□ -1.07
CLK3-201ENST00000345005 A0A1B0GW54 56 aa8.33□□□□□ -1.08
CLK3-201ENST00000345005 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
CLK3-201ENST00000345005 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
CLK3-201ENST00000345005 Q6ZRP5 223 aa8.32□□□□□ -1.08
CLK3-201ENST00000345005 DNAH1Q9P2D7 4330 aa8.32□□□□□ -1.08
CLK3-201ENST00000345005 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
CLK3-201ENST00000345005 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
CLK3-201ENST00000345005 SEC61GP60059 68 aa8.3□□□□□ -1.08
CLK3-201ENST00000345005 PLECQ15149 4684 aaKnown RBP8.3□□□□□ -1.08
CLK3-201ENST00000345005 LYSTQ99698 3801 aa8.3□□□□□ -1.08
CLK3-201ENST00000345005 VPREB1P12018 145 aa8.29□□□□□ -1.08
CLK3-201ENST00000345005 RYR3Q15413 4870 aa8.28□□□□□ -1.08
CLK3-201ENST00000345005 F8WEM9 126 aa8.28□□□□□ -1.08
CLK3-201ENST00000345005 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
CLK3-201ENST00000345005 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 STARD9Q9P2P6 4700 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 M0R2N4 97 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 NREPQ16612 68 aa8.26□□□□□ -1.09
CLK3-201ENST00000345005 BPY2O14599 106 aa8.25□□□□□ -1.09
CLK3-201ENST00000345005 Q6ZRN7 208 aaPredicted RBP8.25□□□□□ -1.09
CLK3-201ENST00000345005 NKAPP1Q8N9T2 125 aa8.24□□□□□ -1.09
CLK3-201ENST00000345005 LRCOL1A6NCL2 159 aa8.24□□□□□ -1.09
CLK3-201ENST00000345005 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
CLK3-201ENST00000345005 VPS13DQ5THJ4 4388 aa8.23□□□□□ -1.09
CLK3-201ENST00000345005 IGLV5-37A0A075B6J1 123 aa8.22□□□□□ -1.09
CLK3-201ENST00000345005 Q6ZR54 194 aa8.22□□□□□ -1.09
CLK3-201ENST00000345005 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
CLK3-201ENST00000345005 BRK1Q8WUW1 75 aa8.22□□□□□ -1.09
CLK3-201ENST00000345005 SNURFQ9Y675 71 aa8.22□□□□□ -1.09
CLK3-201ENST00000345005 SERTAD4-AS1Q5TG53 156 aa8.21□□□□□ -1.1
CLK3-201ENST00000345005 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
CLK3-201ENST00000345005 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.2□□□□□ -1.1
CLK3-201ENST00000345005 PRR15Q8IV56 129 aa8.2□□□□□ -1.1
CLK3-201ENST00000345005 DHRS4-AS1Q9P1J3 65 aa8.2□□□□□ -1.1
CLK3-201ENST00000345005 C16orf90A8MZG2 172 aa8.19□□□□□ -1.1
CLK3-201ENST00000345005 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
CLK3-201ENST00000345005 FUSP35637 526 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLK3-201ENST00000345005 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
CLK3-201ENST00000345005 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
CLK3-201ENST00000345005 DNAH10Q8IVF4 4471 aa8.18□□□□□ -1.1
CLK3-201ENST00000345005 LY6G6CO95867 125 aa8.18□□□□□ -1.1
CLK3-201ENST00000345005 IGKV4-1P06312 121 aa8.18□□□□□ -1.1
CLK3-201ENST00000345005 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
CLK3-201ENST00000345005 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
CLK3-201ENST00000345005 C3orf84H3BNL1 204 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms