RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 C20orf197Q8N268 126 aa12.52□□□□□ -0.41
LYSMD4-202ENST00000344791 TRAV10A0A0B4J240 114 aa12.5□□□□□ -0.41
LYSMD4-202ENST00000344791 Q8N9L7 120 aa12.5□□□□□ -0.41
LYSMD4-202ENST00000344791 TRBV7-4A0A0J9YYF1 115 aa12.49□□□□□ -0.41
LYSMD4-202ENST00000344791 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
LYSMD4-202ENST00000344791 C3orf84H3BNL1 204 aa12.49□□□□□ -0.41
LYSMD4-202ENST00000344791 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
LYSMD4-202ENST00000344791 LYSTQ99698 3801 aa12.48□□□□□ -0.41
LYSMD4-202ENST00000344791 LINC00588Q9Y4M8 146 aa12.48□□□□□ -0.41
LYSMD4-202ENST00000344791 PDE6GP18545 87 aa12.45□□□□□ -0.42
LYSMD4-202ENST00000344791 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
LYSMD4-202ENST00000344791 TRBV7-6A0A0J9YX20 115 aa12.43□□□□□ -0.42
LYSMD4-202ENST00000344791 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
LYSMD4-202ENST00000344791 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
LYSMD4-202ENST00000344791 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
LYSMD4-202ENST00000344791 H3BQ85 93 aa12.4□□□□□ -0.42
LYSMD4-202ENST00000344791 J3KT08 172 aa12.4□□□□□ -0.43
LYSMD4-202ENST00000344791 ST20-AS1Q8NBB2 130 aa12.4□□□□□ -0.43
LYSMD4-202ENST00000344791 Q8N377 158 aa12.39□□□□□ -0.43
LYSMD4-202ENST00000344791 KCNQ1DNQ9H478 68 aa12.39□□□□□ -0.43
LYSMD4-202ENST00000344791 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
LYSMD4-202ENST00000344791 TMEM258P61165 79 aa12.38□□□□□ -0.43
LYSMD4-202ENST00000344791 CXCL6P80162 114 aa12.37□□□□□ -0.43
LYSMD4-202ENST00000344791 DPH3Q96FX2 82 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 NREPQ16612 68 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 Q9BRP9 147 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 BPY2O14599 106 aa12.36□□□□□ -0.43
LYSMD4-202ENST00000344791 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
LYSMD4-202ENST00000344791 RMI2Q96E14 147 aa12.33□□□□□ -0.44
LYSMD4-202ENST00000344791 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
LYSMD4-202ENST00000344791 TRAV7A0A075B6U4 112 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 OXTP01178 125 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 Q6ZRX8 168 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 UBE2BP63146 152 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
LYSMD4-202ENST00000344791 DNAH3Q8TD57 4116 aa12.31□□□□□ -0.44
LYSMD4-202ENST00000344791 SVIPQ8NHG7 77 aa12.31□□□□□ -0.44
LYSMD4-202ENST00000344791 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
LYSMD4-202ENST00000344791 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
LYSMD4-202ENST00000344791 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
LYSMD4-202ENST00000344791 A0A1W2PNN7 141 aa12.3□□□□□ -0.44
LYSMD4-202ENST00000344791 K7EIL1 84 aa12.3□□□□□ -0.44
LYSMD4-202ENST00000344791 SRRM2Q9UQ35 2752 aaKnown RBP12.29□□□□□ -0.44
LYSMD4-202ENST00000344791 HUWE1Q7Z6Z7 4374 aaKnown RBP12.28□□□□□ -0.44
LYSMD4-202ENST00000344791 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
LYSMD4-202ENST00000344791 F8WDY8 70 aa12.26□□□□□ -0.45
LYSMD4-202ENST00000344791 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
LYSMD4-202ENST00000344791 TLX1NBP0CAT3 122 aa12.26□□□□□ -0.45
LYSMD4-202ENST00000344791 DHRS4-AS1Q9P1J3 65 aa12.26□□□□□ -0.45
LYSMD4-202ENST00000344791 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
LYSMD4-202ENST00000344791 KRTAP4-16G5E9R7 235 aaPredicted RBP12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 H7BZZ5 65 aa12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 IGKV4-1P06312 121 aa12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 KRTAP1-5Q9BYS1 174 aa12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 A0A1W2PNM2 257 aa12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 FUSP35637 526 aaKnown RBP eCLIP12.24□□□□□ -0.45
LYSMD4-202ENST00000344791 F8WEM9 126 aa12.23□□□□□ -0.45
LYSMD4-202ENST00000344791 PRYO14603 147 aa12.23□□□□□ -0.45
LYSMD4-202ENST00000344791 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
LYSMD4-202ENST00000344791 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
LYSMD4-202ENST00000344791 PSCAO43653 123 aa12.22□□□□□ -0.45
LYSMD4-202ENST00000344791 PRLHP81277 87 aa12.22□□□□□ -0.45
LYSMD4-202ENST00000344791 IGLV5-48A0A075B6I7 105 aa12.21□□□□□ -0.45
LYSMD4-202ENST00000344791 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.46
LYSMD4-202ENST00000344791 RPS28P62857 69 aaKnown RBP12.2□□□□□ -0.46
LYSMD4-202ENST00000344791 A0A096LNI7 61 aa12.2□□□□□ -0.46
LYSMD4-202ENST00000344791 REG3GQ6UW15 175 aa12.19□□□□□ -0.46
LYSMD4-202ENST00000344791 PLA2G2DQ9UNK4 145 aa12.19□□□□□ -0.46
LYSMD4-202ENST00000344791 SPRR1AP35321 89 aa12.18□□□□□ -0.46
LYSMD4-202ENST00000344791 HIGD2AQ9BW72 106 aa12.18□□□□□ -0.46
LYSMD4-202ENST00000344791 KLKP1Q107X0 134 aa12.17□□□□□ -0.46
LYSMD4-202ENST00000344791 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
LYSMD4-202ENST00000344791 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
LYSMD4-202ENST00000344791 CHTF8P0CG12 524 aa12.16□□□□□ -0.46
LYSMD4-202ENST00000344791 IGLV5-37A0A075B6J1 123 aa12.15□□□□□ -0.46
LYSMD4-202ENST00000344791 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
LYSMD4-202ENST00000344791 BCE1O60756 84 aa12.14□□□□□ -0.47
LYSMD4-202ENST00000344791 FAM30AQ9NZY2 134 aa12.14□□□□□ -0.47
LYSMD4-202ENST00000344791 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
LYSMD4-202ENST00000344791 TMEM254Q8TBM7 123 aa12.14□□□□□ -0.47
LYSMD4-202ENST00000344791 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
LYSMD4-202ENST00000344791 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
LYSMD4-202ENST00000344791 TNP2Q05952 138 aa12.13□□□□□ -0.47
LYSMD4-202ENST00000344791 Q8NBF4 154 aa12.13□□□□□ -0.47
LYSMD4-202ENST00000344791 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
LYSMD4-202ENST00000344791 K7EQZ3 153 aa12.08□□□□□ -0.47
LYSMD4-202ENST00000344791 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
LYSMD4-202ENST00000344791 OCR1Q9BZK8 76 aa12.08□□□□□ -0.48
LYSMD4-202ENST00000344791 HRCT1Q6UXD1 115 aa12.07□□□□□ -0.48
LYSMD4-202ENST00000344791 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
LYSMD4-202ENST00000344791 C16orf90A8MZG2 172 aa12.05□□□□□ -0.48
LYSMD4-202ENST00000344791 DSCR10P59022 87 aa12.04□□□□□ -0.48
LYSMD4-202ENST00000344791 Q5XG85 94 aa12.04□□□□□ -0.48
LYSMD4-202ENST00000344791 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
LYSMD4-202ENST00000344791 A0A087WSZ3 146 aa12.02□□□□□ -0.48
LYSMD4-202ENST00000344791 SPRR4Q96PI1 79 aa12.01□□□□□ -0.49
LYSMD4-202ENST00000344791 SERP1Q9Y6X1 66 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms