RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.76□□□□□ -1.01
COL18A1-201ENST00000342220 H0YGX0 51 aa8.76□□□□□ -1.01
COL18A1-201ENST00000342220 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
COL18A1-201ENST00000342220 CASC10Q5T4H9 136 aa8.75□□□□□ -1.01
COL18A1-201ENST00000342220 B9D2Q9BPU9 175 aa8.75□□□□□ -1.01
COL18A1-201ENST00000342220 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
COL18A1-201ENST00000342220 PMAIP1Q13794 54 aa8.73□□□□□ -1.01
COL18A1-201ENST00000342220 Q8IZM0 81 aa8.73□□□□□ -1.01
COL18A1-201ENST00000342220 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.016e-6■■■□□ 18
COL18A1-201ENST00000342220 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
COL18A1-201ENST00000342220 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
COL18A1-201ENST00000342220 ATP5EP2Q5VTU8 51 aa8.71□□□□□ -1.01
COL18A1-201ENST00000342220 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
COL18A1-201ENST00000342220 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
COL18A1-201ENST00000342220 ORMDL1Q9P0S3 153 aa8.7□□□□□ -1.02
COL18A1-201ENST00000342220 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
COL18A1-201ENST00000342220 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
COL18A1-201ENST00000342220 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
COL18A1-201ENST00000342220 HAMPP81172 84 aa8.69□□□□□ -1.02
COL18A1-201ENST00000342220 Q6ZRU5 148 aa8.68□□□□□ -1.02
COL18A1-201ENST00000342220 LY6G6CO95867 125 aa8.67□□□□□ -1.02
COL18A1-201ENST00000342220 LINC01556Q5JQF7 62 aa8.67□□□□□ -1.02
COL18A1-201ENST00000342220 Q8NDZ9 215 aa8.66□□□□□ -1.02
COL18A1-201ENST00000342220 H3BNG1 76 aa8.65□□□□□ -1.02
COL18A1-201ENST00000342220 PRR34Q9NV39 138 aa8.65□□□□□ -1.02
COL18A1-201ENST00000342220 Q8N814 137 aa8.65□□□□□ -1.02
COL18A1-201ENST00000342220 LYSTQ99698 3801 aa8.65□□□□□ -1.03
COL18A1-201ENST00000342220 PRKDCP78527 4128 aaKnown RBP8.64□□□□□ -1.03
COL18A1-201ENST00000342220 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
COL18A1-201ENST00000342220 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
COL18A1-201ENST00000342220 COX17Q14061 63 aa8.63□□□□□ -1.03
COL18A1-201ENST00000342220 LINC00167Q96N53 147 aa8.63□□□□□ -1.03
COL18A1-201ENST00000342220 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
COL18A1-201ENST00000342220 SYCNQ0VAF6 134 aa8.62□□□□□ -1.03
COL18A1-201ENST00000342220 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
COL18A1-201ENST00000342220 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
COL18A1-201ENST00000342220 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
COL18A1-201ENST00000342220 NDUFC1O43677 76 aa8.61□□□□□ -1.03
COL18A1-201ENST00000342220 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
COL18A1-201ENST00000342220 ATP5EP56381 51 aaPredicted RBP8.6□□□□□ -1.03
COL18A1-201ENST00000342220 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
COL18A1-201ENST00000342220 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
COL18A1-201ENST00000342220 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
COL18A1-201ENST00000342220 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
COL18A1-201ENST00000342220 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
COL18A1-201ENST00000342220 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
COL18A1-201ENST00000342220 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
COL18A1-201ENST00000342220 DNAH9Q9NYC9 4486 aa8.58□□□□□ -1.04
COL18A1-201ENST00000342220 BCE1O60756 84 aa8.57□□□□□ -1.04
COL18A1-201ENST00000342220 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
COL18A1-201ENST00000342220 LINC00575Q6W349 94 aa8.56□□□□□ -1.04
COL18A1-201ENST00000342220 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
COL18A1-201ENST00000342220 NKAPP1Q8N9T2 125 aa8.56□□□□□ -1.04
COL18A1-201ENST00000342220 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
COL18A1-201ENST00000342220 CD164Q04900 197 aa8.55□□□□□ -1.04
COL18A1-201ENST00000342220 NREPQ16612 68 aa8.55□□□□□ -1.04
COL18A1-201ENST00000342220 Q6ZRP5 223 aa8.55□□□□□ -1.04
COL18A1-201ENST00000342220 TRBV7-4A0A0J9YYF1 115 aa8.55□□□□□ -1.04
COL18A1-201ENST00000342220 Q6ZVQ6 151 aa8.54□□□□□ -1.04
COL18A1-201ENST00000342220 LAMTOR3Q9UHA4 124 aa8.54□□□□□ -1.04
COL18A1-201ENST00000342220 PSPHP1O15172 72 aa8.53□□□□□ -1.04
COL18A1-201ENST00000342220 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
COL18A1-201ENST00000342220 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
COL18A1-201ENST00000342220 MRPL55Q7Z7F7 128 aaKnown RBP8.52□□□□□ -1.05
COL18A1-201ENST00000342220 MUC7Q8TAX7 377 aa8.52□□□□□ -1.05
COL18A1-201ENST00000342220 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
COL18A1-201ENST00000342220 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
COL18A1-201ENST00000342220 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
COL18A1-201ENST00000342220 Q6ZQY7 126 aa8.5□□□□□ -1.05
COL18A1-201ENST00000342220 PRYO14603 147 aa8.5□□□□□ -1.05
COL18A1-201ENST00000342220 Q6ZQT0 140 aa8.5□□□□□ -1.05
COL18A1-201ENST00000342220 BPY2O14599 106 aa8.49□□□□□ -1.05
COL18A1-201ENST00000342220 DNAH10Q8IVF4 4471 aa8.48□□□□□ -1.05
COL18A1-201ENST00000342220 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
COL18A1-201ENST00000342220 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
COL18A1-201ENST00000342220 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
COL18A1-201ENST00000342220 Q8N9L7 120 aa8.46□□□□□ -1.06
COL18A1-201ENST00000342220 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
COL18A1-201ENST00000342220 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
COL18A1-201ENST00000342220 LOC110117498A0A087WWA1 95 aa8.45□□□□□ -1.06
COL18A1-201ENST00000342220 UBE2BP63146 152 aa8.45□□□□□ -1.06
COL18A1-201ENST00000342220 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
COL18A1-201ENST00000342220 CXCL6P80162 114 aa8.44□□□□□ -1.06
COL18A1-201ENST00000342220 ZNF73O43830 326 aaPredicted RBP8.44□□□□□ -1.06
COL18A1-201ENST00000342220 SRRM2Q9UQ35 2752 aaKnown RBP8.43□□□□□ -1.06
COL18A1-201ENST00000342220 A8MU10 97 aa8.43□□□□□ -1.06
COL18A1-201ENST00000342220 STARD9Q9P2P6 4700 aa8.42□□□□□ -1.06
COL18A1-201ENST00000342220 A0A096LNI7 61 aa8.42□□□□□ -1.06
COL18A1-201ENST00000342220 COX7BP24311 80 aa8.42□□□□□ -1.06
COL18A1-201ENST00000342220 VPREB1P12018 145 aa8.41□□□□□ -1.06
COL18A1-201ENST00000342220 DNAH7Q8WXX0 4024 aa8.41□□□□□ -1.06
COL18A1-201ENST00000342220 DNAH1Q9P2D7 4330 aa8.41□□□□□ -1.06
COL18A1-201ENST00000342220 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
COL18A1-201ENST00000342220 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
COL18A1-201ENST00000342220 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.07
COL18A1-201ENST00000342220 C7orf33Q8WU49 177 aa8.4□□□□□ -1.07
COL18A1-201ENST00000342220 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
COL18A1-201ENST00000342220 PRR4Q16378 134 aa8.39□□□□□ -1.07
COL18A1-201ENST00000342220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.39□□□□□ -1.07
COL18A1-201ENST00000342220 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms