RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-203ENST00000340635 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
PDE4D-203ENST00000340635 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
PDE4D-203ENST00000340635 C8orf17Q9NRJ1 99 aa9.36□□□□□ -0.91
PDE4D-203ENST00000340635 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
PDE4D-203ENST00000340635 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
PDE4D-203ENST00000340635 KLKP1Q107X0 134 aa9.34□□□□□ -0.91
PDE4D-203ENST00000340635 USP24Q9UPU5 2620 aa9.34□□□□□ -0.91
PDE4D-203ENST00000340635 LINC00336Q6ZUF6 198 aa9.34□□□□□ -0.91
PDE4D-203ENST00000340635 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
PDE4D-203ENST00000340635 WWC2-AS2Q96NR7 200 aa9.33□□□□□ -0.92
PDE4D-203ENST00000340635 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
PDE4D-203ENST00000340635 PRR15Q8IV56 129 aa9.32□□□□□ -0.92
PDE4D-203ENST00000340635 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
PDE4D-203ENST00000340635 IGFL1Q6UW32 110 aa9.29□□□□□ -0.92
PDE4D-203ENST00000340635 Q1T7F1 81 aa9.29□□□□□ -0.92
PDE4D-203ENST00000340635 CR1P17927 2039 aa9.28□□□□□ -0.92
PDE4D-203ENST00000340635 POLQO75417 2590 aa9.28□□□□□ -0.92
PDE4D-203ENST00000340635 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-203ENST00000340635 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
PDE4D-203ENST00000340635 CEP350Q5VT06 3117 aa9.26□□□□□ -0.93
PDE4D-203ENST00000340635 Q8N1X5 172 aa9.26□□□□□ -0.93
PDE4D-203ENST00000340635 IGLV1-50A0A075B6I6 118 aa9.25□□□□□ -0.93
PDE4D-203ENST00000340635 ZNF861PO60384 105 aa9.25□□□□□ -0.93
PDE4D-203ENST00000340635 A0A0A0MQY5 61 aa9.24□□□□□ -0.93
PDE4D-203ENST00000340635 M0R2T5 61 aa9.24□□□□□ -0.93
PDE4D-203ENST00000340635 MTORP42345 2549 aa9.23□□□□□ -0.93
PDE4D-203ENST00000340635 Q8NAQ8 132 aa9.22□□□□□ -0.93
PDE4D-203ENST00000340635 H7BZZ5 65 aa9.21□□□□□ -0.93
PDE4D-203ENST00000340635 KCNQ1DNQ9H478 68 aa9.21□□□□□ -0.93
PDE4D-203ENST00000340635 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
PDE4D-203ENST00000340635 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
PDE4D-203ENST00000340635 SPANXA2-OT1Q8N9U9 137 aa9.19□□□□□ -0.94
PDE4D-203ENST00000340635 FASNP49327 2511 aaKnown RBP9.19□□□□□ -0.94
PDE4D-203ENST00000340635 CHD8Q9HCK8 2581 aa9.18□□□□□ -0.94
PDE4D-203ENST00000340635 Q6ZSA8 131 aa9.16□□□□□ -0.94
PDE4D-203ENST00000340635 LITAFQ99732 161 aa9.16□□□□□ -0.94
PDE4D-203ENST00000340635 WIPF1O43516 503 aa9.15□□□□□ -0.94
PDE4D-203ENST00000340635 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
PDE4D-203ENST00000340635 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
PDE4D-203ENST00000340635 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
PDE4D-203ENST00000340635 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
PDE4D-203ENST00000340635 Q8N377 158 aa9.11□□□□□ -0.95
PDE4D-203ENST00000340635 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
PDE4D-203ENST00000340635 A0A0G2JQZ4 141 aa9.1□□□□□ -0.95
PDE4D-203ENST00000340635 A0A1W2PNN7 141 aa9.1□□□□□ -0.95
PDE4D-203ENST00000340635 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
PDE4D-203ENST00000340635 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
PDE4D-203ENST00000340635 HRES1P13985 223 aa9.09□□□□□ -0.95
PDE4D-203ENST00000340635 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
PDE4D-203ENST00000340635 LAMA2P24043 3122 aaKnown RBP9.09□□□□□ -0.95
PDE4D-203ENST00000340635 A0A1B0GU33 70 aa9.09□□□□□ -0.95
PDE4D-203ENST00000340635 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
PDE4D-203ENST00000340635 A0A087WTM6 91 aa9.06□□□□□ -0.96
PDE4D-203ENST00000340635 H3BS24 57 aa9.05□□□□□ -0.96
PDE4D-203ENST00000340635 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
PDE4D-203ENST00000340635 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
PDE4D-203ENST00000340635 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
PDE4D-203ENST00000340635 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
PDE4D-203ENST00000340635 AKAP13Q12802 2813 aa9□□□□□ -0.97
PDE4D-203ENST00000340635 CFAP54Q96N23 3096 aa9□□□□□ -0.97
PDE4D-203ENST00000340635 SPINK7P58062 85 aa8.98□□□□□ -0.97
PDE4D-203ENST00000340635 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
PDE4D-203ENST00000340635 S4R3F8 94 aa8.97□□□□□ -0.97
PDE4D-203ENST00000340635 COL4A2P08572 1712 aa8.96□□□□□ -0.97
PDE4D-203ENST00000340635 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.98
PDE4D-203ENST00000340635 Q75L30 129 aa8.95□□□□□ -0.98
PDE4D-203ENST00000340635 K7EIL1 84 aa8.93□□□□□ -0.98
PDE4D-203ENST00000340635 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
PDE4D-203ENST00000340635 PRR34Q9NV39 138 aa8.92□□□□□ -0.98
PDE4D-203ENST00000340635 KRTAP10-11P60412 298 aa8.91□□□□□ -0.98
PDE4D-203ENST00000340635 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
PDE4D-203ENST00000340635 R4GN34 69 aa8.88□□□□□ -0.99
PDE4D-203ENST00000340635 MKI67P46013 3256 aaKnown RBP8.88□□□□□ -0.99
PDE4D-203ENST00000340635 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
PDE4D-203ENST00000340635 EPG5Q9HCE0 2579 aa8.87□□□□□ -0.99
PDE4D-203ENST00000340635 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
PDE4D-203ENST00000340635 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
PDE4D-203ENST00000340635 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
PDE4D-203ENST00000340635 CNBPP62633 177 aaKnown RBP8.84□□□□□ -0.99
PDE4D-203ENST00000340635 PRAC1Q96KF2 57 aa8.81□□□□□ -1
PDE4D-203ENST00000340635 PLAC4Q8WY50 150 aa8.8□□□□□ -1
PDE4D-203ENST00000340635 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
PDE4D-203ENST00000340635 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
PDE4D-203ENST00000340635 REV3LO60673 3130 aa8.79□□□□□ -1
PDE4D-203ENST00000340635 C10orf142B7Z368 130 aa8.79□□□□□ -1
PDE4D-203ENST00000340635 KLK9Q2XQG4 91 aa8.79□□□□□ -1
PDE4D-203ENST00000340635 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
PDE4D-203ENST00000340635 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
PDE4D-203ENST00000340635 CELSR3Q9NYQ7 3312 aa8.78□□□□□ -1
PDE4D-203ENST00000340635 ZCCHC13Q8WW36 166 aaKnown RBP8.76□□□□□ -1.01
PDE4D-203ENST00000340635 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-203ENST00000340635 HECTD1Q9ULT8 2610 aa8.74□□□□□ -1.01
PDE4D-203ENST00000340635 CASC10Q5T4H9 136 aa8.74□□□□□ -1.01
PDE4D-203ENST00000340635 ROMO1P60602 79 aa8.74□□□□□ -1.01
PDE4D-203ENST00000340635 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
PDE4D-203ENST00000340635 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
PDE4D-203ENST00000340635 CENPEQ02224 2701 aa8.69□□□□□ -1.02
PDE4D-203ENST00000340635 Q5XG85 94 aa8.68□□□□□ -1.02
PDE4D-203ENST00000340635 DNAH14Q0VDD8 3507 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms