RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
SCARB1-202ENST00000339570 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
SCARB1-202ENST00000339570 A0A0G2JQZ4 141 aa10.65□□□□□ -0.7
SCARB1-202ENST00000339570 A0A1W2PNN7 141 aa10.65□□□□□ -0.7
SCARB1-202ENST00000339570 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
SCARB1-202ENST00000339570 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 FAM168BA1KXE4 195 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 M0R378 163 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 ESRGQ1W209 222 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 C15orf56Q8N910 161 aa10.64□□□□□ -0.71
SCARB1-202ENST00000339570 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
SCARB1-202ENST00000339570 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
SCARB1-202ENST00000339570 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
SCARB1-202ENST00000339570 PDE6GP18545 87 aa10.61□□□□□ -0.71
SCARB1-202ENST00000339570 CXCL6P80162 114 aa10.61□□□□□ -0.71
SCARB1-202ENST00000339570 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
SCARB1-202ENST00000339570 ST20-AS1Q8NBB2 130 aa10.61□□□□□ -0.71
SCARB1-202ENST00000339570 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
SCARB1-202ENST00000339570 ANK2Q01484 3957 aa10.6□□□□□ -0.71
SCARB1-202ENST00000339570 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
SCARB1-202ENST00000339570 TMEM254Q8TBM7 123 aa10.6□□□□□ -0.71
SCARB1-202ENST00000339570 HIGD2AQ9BW72 106 aa10.6□□□□□ -0.71
SCARB1-202ENST00000339570 EGFEM1PQ0D2K5 195 aa10.59□□□□□ -0.71
SCARB1-202ENST00000339570 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
SCARB1-202ENST00000339570 J3QKU1 62 aa10.58□□□□□ -0.72
SCARB1-202ENST00000339570 PRR4Q16378 134 aa10.58□□□□□ -0.72
SCARB1-202ENST00000339570 SERP1Q9Y6X1 66 aa10.58□□□□□ -0.72
SCARB1-202ENST00000339570 C7orf33Q8WU49 177 aa10.58□□□□□ -0.72
SCARB1-202ENST00000339570 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
SCARB1-202ENST00000339570 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
SCARB1-202ENST00000339570 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
SCARB1-202ENST00000339570 KLKP1Q107X0 134 aa10.57□□□□□ -0.72
SCARB1-202ENST00000339570 TRBV7-6A0A0J9YX20 115 aa10.56□□□□□ -0.72
SCARB1-202ENST00000339570 KMT2BQ9UMN6 2715 aaPredicted RBP10.56□□□□□ -0.72
SCARB1-202ENST00000339570 IGKV4-1P06312 121 aa10.55□□□□□ -0.72
SCARB1-202ENST00000339570 Q8N377 158 aa10.55□□□□□ -0.72
SCARB1-202ENST00000339570 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
SCARB1-202ENST00000339570 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
SCARB1-202ENST00000339570 UBE2BP63146 152 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 FAM229BQ4G0N7 80 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 A0A0U1RQV1 116 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
SCARB1-202ENST00000339570 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
SCARB1-202ENST00000339570 MRAPQ8TCY5 172 aa10.52□□□□□ -0.73
SCARB1-202ENST00000339570 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
SCARB1-202ENST00000339570 BRK1Q8WUW1 75 aa10.51□□□□□ -0.73
SCARB1-202ENST00000339570 KRTAP10-11P60412 298 aa10.51□□□□□ -0.73
SCARB1-202ENST00000339570 TENM2Q9NT68 2774 aa10.5□□□□□ -0.73
SCARB1-202ENST00000339570 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
SCARB1-202ENST00000339570 FUSP35637 526 aaKnown RBP eCLIP10.5□□□□□ -0.733e-6■■□□□ 13.4
SCARB1-202ENST00000339570 IGKV2-24A0A0C4DH68 120 aa10.49□□□□□ -0.73
SCARB1-202ENST00000339570 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
SCARB1-202ENST00000339570 PRYO14603 147 aa10.48□□□□□ -0.73
SCARB1-202ENST00000339570 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
SCARB1-202ENST00000339570 Q9BRP9 147 aa10.47□□□□□ -0.73
SCARB1-202ENST00000339570 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
SCARB1-202ENST00000339570 H3BQ85 93 aa10.46□□□□□ -0.74
SCARB1-202ENST00000339570 SMIM26A0A096LP01 95 aa10.45□□□□□ -0.74
SCARB1-202ENST00000339570 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
SCARB1-202ENST00000339570 A0A096LNI7 61 aa10.43□□□□□ -0.74
SCARB1-202ENST00000339570 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
SCARB1-202ENST00000339570 OCR1Q9BZK8 76 aa10.43□□□□□ -0.74
SCARB1-202ENST00000339570 K7EQZ3 153 aa10.42□□□□□ -0.74
SCARB1-202ENST00000339570 STAB2Q8WWQ8 2551 aa10.42□□□□□ -0.74
SCARB1-202ENST00000339570 EPM2AB3EWF7 344 aa10.42□□□□□ -0.74
SCARB1-202ENST00000339570 PRLHP81277 87 aa10.41□□□□□ -0.74
SCARB1-202ENST00000339570 Q6ZRX8 168 aa10.41□□□□□ -0.74
SCARB1-202ENST00000339570 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
SCARB1-202ENST00000339570 BCE1O60756 84 aa10.41□□□□□ -0.74
SCARB1-202ENST00000339570 NDUFC1O43677 76 aa10.39□□□□□ -0.75
SCARB1-202ENST00000339570 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
SCARB1-202ENST00000339570 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
SCARB1-202ENST00000339570 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
SCARB1-202ENST00000339570 RPL37AP61513 92 aaKnown RBP10.38□□□□□ -0.75
SCARB1-202ENST00000339570 LYSTQ99698 3801 aa10.36□□□□□ -0.75
SCARB1-202ENST00000339570 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
SCARB1-202ENST00000339570 LINC00588Q9Y4M8 146 aa10.35□□□□□ -0.75
SCARB1-202ENST00000339570 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
SCARB1-202ENST00000339570 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
SCARB1-202ENST00000339570 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
SCARB1-202ENST00000339570 Q8NBF4 154 aa10.33□□□□□ -0.76
SCARB1-202ENST00000339570 IGLV5-48A0A075B6I7 105 aa10.33□□□□□ -0.76
SCARB1-202ENST00000339570 A0A087WSZ3 146 aa10.33□□□□□ -0.76
SCARB1-202ENST00000339570 DSCR10P59022 87 aa10.33□□□□□ -0.76
SCARB1-202ENST00000339570 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
SCARB1-202ENST00000339570 PRO0628Q9UI54 55 aa10.32□□□□□ -0.76
SCARB1-202ENST00000339570 PSPHP1O15172 72 aa10.32□□□□□ -0.76
SCARB1-202ENST00000339570 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
SCARB1-202ENST00000339570 PSCAO43653 123 aa10.3□□□□□ -0.76
SCARB1-202ENST00000339570 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
SCARB1-202ENST00000339570 WIPF1O43516 503 aa10.28□□□□□ -0.76
SCARB1-202ENST00000339570 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
SCARB1-202ENST00000339570 H3BNG1 76 aa10.28□□□□□ -0.76
SCARB1-202ENST00000339570 KRTAP4-16G5E9R7 235 aaPredicted RBP10.26□□□□□ -0.77
SCARB1-202ENST00000339570 C1orf64Q8NEQ6 169 aa10.26□□□□□ -0.77
SCARB1-202ENST00000339570 DNAH10OSP0CZ25 163 aa10.25□□□□□ -0.77
SCARB1-202ENST00000339570 ATP5EP56381 51 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms