RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 Q6ZQY7 126 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 ORMDL1Q9P0S3 153 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 LRCOL1A6NCL2 159 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 Q6ZRN7 208 aaPredicted RBP4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 LINC00167Q96N53 147 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 DNAH6Q9C0G6 4158 aa4.73□□□□□ -1.65
SRFBP1-201ENST00000339397 NKAPP1Q8N9T2 125 aa4.73□□□□□ -1.65
SRFBP1-201ENST00000339397 A0A1W2PNN7 141 aa4.73□□□□□ -1.65
SRFBP1-201ENST00000339397 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
SRFBP1-201ENST00000339397 ELOF1P60002 83 aaKnown RBP4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 TTC32Q5I0X7 151 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 SMCR5Q8TEV8 140 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 SNCGO76070 127 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 COX7BP24311 80 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 GAGE2AQ6NT46 116 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
SRFBP1-201ENST00000339397 LOC107984640A0A0U1RRK4 108 aa4.71□□□□□ -1.65
SRFBP1-201ENST00000339397 PANO1I0J062 215 aa4.71□□□□□ -1.65
SRFBP1-201ENST00000339397 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.65
SRFBP1-201ENST00000339397 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
SRFBP1-201ENST00000339397 IGLV1-50A0A075B6I6 118 aa4.71□□□□□ -1.66
SRFBP1-201ENST00000339397 CNBPP62633 177 aaKnown RBP4.71□□□□□ -1.66
SRFBP1-201ENST00000339397 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
SRFBP1-201ENST00000339397 A0A1B0GX51 115 aa4.7□□□□□ -1.66
SRFBP1-201ENST00000339397 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
SRFBP1-201ENST00000339397 MRPL55Q7Z7F7 128 aaKnown RBP4.7□□□□□ -1.66
SRFBP1-201ENST00000339397 Q6Q795 121 aa4.69□□□□□ -1.66
SRFBP1-201ENST00000339397 Q9BRP9 147 aa4.69□□□□□ -1.66
SRFBP1-201ENST00000339397 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
SRFBP1-201ENST00000339397 KRTAP4-16G5E9R7 235 aaPredicted RBP4.69□□□□□ -1.66
SRFBP1-201ENST00000339397 DEFB105AQ8NG35 78 aa4.69□□□□□ -1.66
SRFBP1-201ENST00000339397 ERC2-IT1O76042 136 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 LY6G6CO95867 125 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 SEC61GP60059 68 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 LAMTOR3Q9UHA4 124 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 INAFM2P0DMQ5 153 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 LINC00846Q9NV44 126 aa4.68□□□□□ -1.66
SRFBP1-201ENST00000339397 IGLV5-37A0A075B6J1 123 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 PHF5AQ7RTV0 110 aaKnown RBP4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 ST20-AS1Q8NBB2 130 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 Q6ZR54 194 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 B5MCH6 92 aa4.67□□□□□ -1.66
SRFBP1-201ENST00000339397 A0A087WTM6 91 aa4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 SPRR1AP35321 89 aa4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 Q6ZRX8 168 aa4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 RBM3P98179 157 aaKnown RBP4.66□□□□□ -1.66
SRFBP1-201ENST00000339397 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 CCKP06307 115 aa4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 PRLHP81277 87 aa4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 Q8N377 158 aa4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 DPH3Q96FX2 82 aa4.65□□□□□ -1.66
SRFBP1-201ENST00000339397 ETDCA0A1B0GVM5 59 aa4.65□□□□□ -1.67
SRFBP1-201ENST00000339397 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
SRFBP1-201ENST00000339397 C14orf177Q52M58 125 aa4.65□□□□□ -1.67
SRFBP1-201ENST00000339397 JMJD7-PLA2G4BH0Y9G9 81 aa4.64□□□□□ -1.67
SRFBP1-201ENST00000339397 ACYP1P07311 99 aa4.64□□□□□ -1.67
SRFBP1-201ENST00000339397 REG3GQ6UW15 175 aa4.64□□□□□ -1.67
SRFBP1-201ENST00000339397 Q6ZQT0 140 aa4.64□□□□□ -1.67
SRFBP1-201ENST00000339397 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
SRFBP1-201ENST00000339397 PRYO14603 147 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 UBE2BP63146 152 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
SRFBP1-201ENST00000339397 PKD1P98161 4303 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 CCDC179H3BU77 68 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 FAM19A1Q7Z5A9 133 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 PKHD1P08F94 4074 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 C1orf134Q5TEV5 83 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 LINC00476Q8WZB0 136 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 WWC2-AS2Q96NR7 200 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 DSCR8Q96T75 97 aa4.62□□□□□ -1.67
SRFBP1-201ENST00000339397 RTL8CO15255 209 aa4.61□□□□□ -1.67
SRFBP1-201ENST00000339397 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
SRFBP1-201ENST00000339397 TRBV7-4A0A0J9YYF1 115 aa4.61□□□□□ -1.67
SRFBP1-201ENST00000339397 LINC00643Q86TS7 51 aa4.61□□□□□ -1.67
SRFBP1-201ENST00000339397 IMUPQ9GZP8 106 aa4.61□□□□□ -1.67
SRFBP1-201ENST00000339397 DHRS4-AS1Q9P1J3 65 aa4.6□□□□□ -1.67
SRFBP1-201ENST00000339397 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
SRFBP1-201ENST00000339397 LOC110117498A0A087WWA1 95 aa4.59□□□□□ -1.67
SRFBP1-201ENST00000339397 KRTAP10-2P60368 255 aa4.59□□□□□ -1.67
SRFBP1-201ENST00000339397 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.67
SRFBP1-201ENST00000339397 A0A087WVE0 104 aa4.59□□□□□ -1.67
SRFBP1-201ENST00000339397 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
SRFBP1-201ENST00000339397 HAMPP81172 84 aa4.59□□□□□ -1.68
SRFBP1-201ENST00000339397 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms