RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 A0A087WYN8 130 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 PANO1I0J062 215 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 M0R378 163 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 LST1O00453 97 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 RTL8CO15255 209 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 ATXN8Q156A1 80 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 C6orf99Q4VX62 202 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 C7orf33Q8WU49 177 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 A0A1W2PNN7 141 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 RPL37AP8A6NKH3 93 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 C16orf90A8MZG2 172 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 C9JAW5 83 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 H3BS24 57 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 NKAPP1Q8N9T2 125 aa2.64□□□□□ -1.99
MCF2-201ENST00000338585 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
MCF2-201ENST00000338585 PLA2G2DQ9UNK4 145 aa2.63□□□□□ -1.99
MCF2-201ENST00000338585 C22orf24Q9Y442 160 aa2.63□□□□□ -1.99
MCF2-201ENST00000338585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.63□□□□□ -1.99
MCF2-201ENST00000338585 IGLV5-37A0A075B6J1 123 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 F8W1H4 67 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 SLC25A20O43772 301 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 ZNF73O43830 326 aaPredicted RBP2.62□□□□□ -1.99
MCF2-201ENST00000338585 ETDBQ3ZM63 59 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 LINC00167Q96N53 147 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 IGLV5-52A0A0A0MRZ9 124 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 H0YGX0 51 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 M0QXV9 152 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 KRTAP10-2P60368 255 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 MRPL55Q7Z7F7 128 aaKnown RBP2.62□□□□□ -1.99
MCF2-201ENST00000338585 DIRC1Q969H9 104 aa2.62□□□□□ -1.99
MCF2-201ENST00000338585 IGLV1-50A0A075B6I6 118 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 LCE6AA0A183 80 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 TRACP01848 142 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 PHF5AQ7RTV0 110 aaKnown RBP2.61□□□□□ -1.99
MCF2-201ENST00000338585 KRTAP11-1Q8IUC1 163 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 LINC00575Q6W349 94 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 ANKRD29Q8N6D5 301 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 KCNQ1DNQ9H478 68 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
MCF2-201ENST00000338585 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 COX7BP24311 80 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 ELOF1P60002 83 aaKnown RBP2.6□□□□□ -1.99
MCF2-201ENST00000338585 SPACA4Q8TDM5 124 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 DPH3Q96FX2 82 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 FAM229AH3BQW9 127 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 DNAL4O96015 105 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 BAALC-AS2P0C853 105 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 RYR2Q92736 4967 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 hADV29S1A0JD25 119 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 KRTAP4-16G5E9R7 235 aaPredicted RBP2.6□□□□□ -1.99
MCF2-201ENST00000338585 H3BT86 120 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 SPRR1AP35321 89 aa2.6□□□□□ -1.99
MCF2-201ENST00000338585 FAT2Q9NYQ8 4349 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 PRYO14603 147 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 OCIAD2Q56VL3 154 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 TEN1Q86WV5 123 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 LINC01600Q96MT4 127 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 LINC00474Q9P2X8 69 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 PKIGQ9Y2B9 76 aa2.59□□□□□ -1.99
MCF2-201ENST00000338585 TRBV7-6A0A0J9YX20 115 aa2.59□□□□□ -2
MCF2-201ENST00000338585 A0A1B0GV72 72 aa2.59□□□□□ -2
MCF2-201ENST00000338585 ETDCA0A1B0GVM5 59 aa2.59□□□□□ -2
MCF2-201ENST00000338585 B5MCH6 92 aa2.59□□□□□ -2
MCF2-201ENST00000338585 UBE2BP63146 152 aa2.59□□□□□ -2
MCF2-201ENST00000338585 REG3GQ6UW15 175 aa2.59□□□□□ -2
MCF2-201ENST00000338585 Q6ZQY7 126 aa2.59□□□□□ -2
MCF2-201ENST00000338585 FAM30AQ9NZY2 134 aa2.59□□□□□ -2
MCF2-201ENST00000338585 DNAH11Q96DT5 4516 aa2.59□□□□□ -2
MCF2-201ENST00000338585 A0A1B0GX51 115 aa2.58□□□□□ -2
MCF2-201ENST00000338585 KRTAP10-1P60331 282 aa2.58□□□□□ -2
MCF2-201ENST00000338585 HAMPP81172 84 aa2.58□□□□□ -2
MCF2-201ENST00000338585 PRLHP81277 87 aa2.58□□□□□ -2
MCF2-201ENST00000338585 Q6ZRX8 168 aa2.58□□□□□ -2
MCF2-201ENST00000338585 Q9BRP9 147 aa2.58□□□□□ -2
MCF2-201ENST00000338585 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
MCF2-201ENST00000338585 CBY1Q9Y3M2 126 aa2.58□□□□□ -2
MCF2-201ENST00000338585 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
MCF2-201ENST00000338585 EPM2AB3EWF7 344 aa2.58□□□□□ -2
MCF2-201ENST00000338585 ERC2-IT1O76042 136 aa2.58□□□□□ -2
MCF2-201ENST00000338585 PCP4P48539 62 aa2.58□□□□□ -2
MCF2-201ENST00000338585 FAM19A1Q7Z5A9 133 aa2.57□□□□□ -2
MCF2-201ENST00000338585 PPDPFLQ8WWR9 84 aa2.57□□□□□ -2
MCF2-201ENST00000338585 PLAC8Q9NZF1 115 aa2.57□□□□□ -2
MCF2-201ENST00000338585 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
MCF2-201ENST00000338585 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
MCF2-201ENST00000338585 SMCR5Q8TEV8 140 aa2.57□□□□□ -2
MCF2-201ENST00000338585 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
MCF2-201ENST00000338585 PKD1P98161 4303 aa2.57□□□□□ -2
MCF2-201ENST00000338585 SNCGO76070 127 aa2.56□□□□□ -2
MCF2-201ENST00000338585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.56□□□□□ -2
MCF2-201ENST00000338585 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
MCF2-201ENST00000338585 K7ERU9 68 aa2.56□□□□□ -2
MCF2-201ENST00000338585 SCXQ7RTU7 201 aa2.56□□□□□ -2
MCF2-201ENST00000338585 CIRBP-AS1Q8TBR5 109 aa2.56□□□□□ -2
MCF2-201ENST00000338585 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms