RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
NUDCD3-201ENST00000338427 E9PLD3 99 aa7.49□□□□□ -1.21
NUDCD3-201ENST00000338427 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
NUDCD3-201ENST00000338427 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
NUDCD3-201ENST00000338427 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
NUDCD3-201ENST00000338427 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
NUDCD3-201ENST00000338427 LITAFQ99732 161 aa7.48□□□□□ -1.21
NUDCD3-201ENST00000338427 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
NUDCD3-201ENST00000338427 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 Q8N377 158 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
NUDCD3-201ENST00000338427 OR13C6PQ8NH95 151 aa7.46□□□□□ -1.22
NUDCD3-201ENST00000338427 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.22
NUDCD3-201ENST00000338427 C9orf153Q5TBE3 101 aa7.45□□□□□ -1.22
NUDCD3-201ENST00000338427 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
NUDCD3-201ENST00000338427 LINC01545Q5VT33 79 aa7.43□□□□□ -1.22
NUDCD3-201ENST00000338427 HRCT1Q6UXD1 115 aa7.43□□□□□ -1.22
NUDCD3-201ENST00000338427 ASB16-AS1Q495Z4 193 aa7.42□□□□□ -1.22
NUDCD3-201ENST00000338427 ZNF815PA8K554 130 aa7.41□□□□□ -1.22
NUDCD3-201ENST00000338427 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
NUDCD3-201ENST00000338427 PET117Q6UWS5 81 aa7.41□□□□□ -1.22
NUDCD3-201ENST00000338427 SLC25A20O43772 301 aa7.4□□□□□ -1.22
NUDCD3-201ENST00000338427 SPANXCQ9NY87 97 aa7.4□□□□□ -1.22
NUDCD3-201ENST00000338427 TIMM17BO60830 172 aa7.39□□□□□ -1.23
NUDCD3-201ENST00000338427 HINT1P49773 126 aaPredicted RBP7.39□□□□□ -1.23
NUDCD3-201ENST00000338427 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
NUDCD3-201ENST00000338427 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
NUDCD3-201ENST00000338427 SPRR1BP22528 89 aa7.37□□□□□ -1.23
NUDCD3-201ENST00000338427 KRTDAPP60985 99 aa7.37□□□□□ -1.23
NUDCD3-201ENST00000338427 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
NUDCD3-201ENST00000338427 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
NUDCD3-201ENST00000338427 A0A0G2JQZ4 141 aa7.36□□□□□ -1.23
NUDCD3-201ENST00000338427 COX7BP24311 80 aa7.36□□□□□ -1.23
NUDCD3-201ENST00000338427 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
NUDCD3-201ENST00000338427 XP32Q5T750 250 aa7.36□□□□□ -1.23
NUDCD3-201ENST00000338427 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
NUDCD3-201ENST00000338427 Q1RN00 199 aa7.35□□□□□ -1.23
NUDCD3-201ENST00000338427 SPANXDQ9BXN6 97 aa7.35□□□□□ -1.23
NUDCD3-201ENST00000338427 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
NUDCD3-201ENST00000338427 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
NUDCD3-201ENST00000338427 TAL2Q16559 108 aa7.34□□□□□ -1.23
NUDCD3-201ENST00000338427 DHRS4-AS1Q9P1J3 65 aa7.34□□□□□ -1.23
NUDCD3-201ENST00000338427 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
NUDCD3-201ENST00000338427 LINC00518Q8N0U6 118 aa7.33□□□□□ -1.24
NUDCD3-201ENST00000338427 LAMTOR3Q9UHA4 124 aa7.33□□□□□ -1.24
NUDCD3-201ENST00000338427 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 H7C2G1 150 aa7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 CBY1Q9Y3M2 126 aa7.32□□□□□ -1.24
NUDCD3-201ENST00000338427 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
NUDCD3-201ENST00000338427 A6NDN8 102 aa7.3□□□□□ -1.24
NUDCD3-201ENST00000338427 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
NUDCD3-201ENST00000338427 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
NUDCD3-201ENST00000338427 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
NUDCD3-201ENST00000338427 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
NUDCD3-201ENST00000338427 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
NUDCD3-201ENST00000338427 IFITM1P13164 125 aa7.26□□□□□ -1.25
NUDCD3-201ENST00000338427 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
NUDCD3-201ENST00000338427 TRBV7-6A0A0J9YX20 115 aa7.25□□□□□ -1.25
NUDCD3-201ENST00000338427 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
NUDCD3-201ENST00000338427 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
NUDCD3-201ENST00000338427 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
NUDCD3-201ENST00000338427 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
NUDCD3-201ENST00000338427 A0A1B0GWB2 263 aa7.24□□□□□ -1.25
NUDCD3-201ENST00000338427 C20orf202A1L168 122 aa7.24□□□□□ -1.25
NUDCD3-201ENST00000338427 AKR1D1P51857 326 aa7.24□□□□□ -1.25
NUDCD3-201ENST00000338427 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
NUDCD3-201ENST00000338427 IGLV5-48A0A075B6I7 105 aa7.23□□□□□ -1.25
NUDCD3-201ENST00000338427 C1orf195Q5TG92 126 aa7.23□□□□□ -1.25
NUDCD3-201ENST00000338427 CD164Q04900 197 aa7.22□□□□□ -1.25
NUDCD3-201ENST00000338427 Q6ZVH6 145 aa7.21□□□□□ -1.26
NUDCD3-201ENST00000338427 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
NUDCD3-201ENST00000338427 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
NUDCD3-201ENST00000338427 HIST3H2BBQ8N257 126 aa7.18□□□□□ -1.26
NUDCD3-201ENST00000338427 A4D1N5 150 aa7.17□□□□□ -1.26
NUDCD3-201ENST00000338427 Q5XG85 94 aa7.17□□□□□ -1.26
NUDCD3-201ENST00000338427 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
NUDCD3-201ENST00000338427 MT1HP80294 61 aa7.16□□□□□ -1.26
NUDCD3-201ENST00000338427 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
NUDCD3-201ENST00000338427 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.26
NUDCD3-201ENST00000338427 C12orf57Q99622 126 aa7.14□□□□□ -1.27
NUDCD3-201ENST00000338427 SNRPEP62304 92 aaKnown RBP7.13□□□□□ -1.27
NUDCD3-201ENST00000338427 Q6ZQY7 126 aa7.13□□□□□ -1.27
NUDCD3-201ENST00000338427 S100A2P29034 98 aa7.12□□□□□ -1.27
NUDCD3-201ENST00000338427 VAMP3Q15836 100 aa7.12□□□□□ -1.27
NUDCD3-201ENST00000338427 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
NUDCD3-201ENST00000338427 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
NUDCD3-201ENST00000338427 hADV29S1A0JD25 119 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms