RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ZNF73O43830 326 aaPredicted RBP15.08■□□□□ 0
CLPTM1-201ENST00000337392 OBSCN-AS1Q96MR7 158 aa15.08■□□□□ 0
CLPTM1-201ENST00000337392 UPK3BQ9BT76 320 aa15.08■□□□□ 0
CLPTM1-201ENST00000337392 LINC00846Q9NV44 126 aa15.07■□□□□ 0
CLPTM1-201ENST00000337392 SRRM2Q9UQ35 2752 aaKnown RBP15.06■□□□□ 0
CLPTM1-201ENST00000337392 DYNC2H1Q8NCM8 4307 aaKnown RBP15.05■□□□□ 0
CLPTM1-201ENST00000337392 DIRC1Q969H9 104 aa15.05■□□□□ 0
CLPTM1-201ENST00000337392 MUC7Q8TAX7 377 aa15.04■□□□□ -0
CLPTM1-201ENST00000337392 RPL37AP8A6NKH3 93 aa15.03■□□□□ -0
CLPTM1-201ENST00000337392 M0R2N4 97 aa15.02■□□□□ -0
CLPTM1-201ENST00000337392 TMEM256-PLSCR3K7ERE1 68 aa15.01□□□□□ -0.01
CLPTM1-201ENST00000337392 KMT2AQ03164 3969 aa15.01□□□□□ -0.01
CLPTM1-201ENST00000337392 M0R378 163 aa15□□□□□ -0.01
CLPTM1-201ENST00000337392 LAMTOR3Q9UHA4 124 aa15□□□□□ -0.01
CLPTM1-201ENST00000337392 IGKV3D-7A0A0C4DH55 119 aa14.99□□□□□ -0.01
CLPTM1-201ENST00000337392 TGP01266 2768 aa14.99□□□□□ -0.01
CLPTM1-201ENST00000337392 SERP2Q8N6R1 65 aa14.98□□□□□ -0.01
CLPTM1-201ENST00000337392 COX7BP24311 80 aa14.98□□□□□ -0.01
CLPTM1-201ENST00000337392 KRTAP7-1Q8IUC3 87 aa14.97□□□□□ -0.01
CLPTM1-201ENST00000337392 C7orf33Q8WU49 177 aa14.97□□□□□ -0.01
CLPTM1-201ENST00000337392 ELOF1P60002 83 aaKnown RBP14.96□□□□□ -0.01
CLPTM1-201ENST00000337392 NKAPP1Q8N9T2 125 aa14.95□□□□□ -0.02
CLPTM1-201ENST00000337392 A0A087WVE0 104 aa14.95□□□□□ -0.02
CLPTM1-201ENST00000337392 CCKP06307 115 aa14.93□□□□□ -0.02
CLPTM1-201ENST00000337392 LINC00336Q6ZUF6 198 aa14.93□□□□□ -0.02
CLPTM1-201ENST00000337392 UBE2DNLQ8IWF7 75 aa14.93□□□□□ -0.02
CLPTM1-201ENST00000337392 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.92□□□□□ -0.02
CLPTM1-201ENST00000337392 F8WDY8 70 aa14.92□□□□□ -0.02
CLPTM1-201ENST00000337392 PRO0628Q9UI54 55 aa14.92□□□□□ -0.02
CLPTM1-201ENST00000337392 APLNQ9ULZ1 77 aa14.9□□□□□ -0.02
CLPTM1-201ENST00000337392 JMJD7-PLA2G4BH0Y9G9 81 aa14.9□□□□□ -0.02
CLPTM1-201ENST00000337392 LINC00528Q8N1L1 170 aa14.89□□□□□ -0.03
CLPTM1-201ENST00000337392 IGKV2-24A0A0C4DH68 120 aa14.89□□□□□ -0.03
CLPTM1-201ENST00000337392 RBM3P98179 157 aaKnown RBP14.89□□□□□ -0.03
CLPTM1-201ENST00000337392 DEFB105AQ8NG35 78 aa14.88□□□□□ -0.03
CLPTM1-201ENST00000337392 B9D2Q9BPU9 175 aa14.86□□□□□ -0.03
CLPTM1-201ENST00000337392 PSCAO43653 123 aa14.86□□□□□ -0.03
CLPTM1-201ENST00000337392 Q6ZQT0 140 aa14.84□□□□□ -0.03
CLPTM1-201ENST00000337392 RMI2Q96E14 147 aa14.84□□□□□ -0.03
CLPTM1-201ENST00000337392 PKIGQ9Y2B9 76 aa14.83□□□□□ -0.03
CLPTM1-201ENST00000337392 DNAH2Q9P225 4427 aa14.83□□□□□ -0.04
CLPTM1-201ENST00000337392 TLX1NBP0CAT3 122 aa14.82□□□□□ -0.04
CLPTM1-201ENST00000337392 Q6JHZ5 121 aa14.82□□□□□ -0.04
CLPTM1-201ENST00000337392 VPS13DQ5THJ4 4388 aa14.82□□□□□ -0.04
CLPTM1-201ENST00000337392 KCNQ1DNQ9H478 68 aa14.81□□□□□ -0.04
CLPTM1-201ENST00000337392 A0A096LNI7 61 aa14.8□□□□□ -0.04
CLPTM1-201ENST00000337392 FUSP35637 526 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLPTM1-201ENST00000337392 CHTF8P0CG12 524 aa14.79□□□□□ -0.04
CLPTM1-201ENST00000337392 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.79□□□□□ -0.04
CLPTM1-201ENST00000337392 Q9BRP9 147 aa14.79□□□□□ -0.04
CLPTM1-201ENST00000337392 ST20-AS1Q8NBB2 130 aa14.78□□□□□ -0.04
CLPTM1-201ENST00000337392 IGLV1-50A0A075B6I6 118 aa14.77□□□□□ -0.04
CLPTM1-201ENST00000337392 HECTD4Q9Y4D8 3996 aa14.77□□□□□ -0.05
CLPTM1-201ENST00000337392 FBN3Q75N90 2809 aa14.76□□□□□ -0.05
CLPTM1-201ENST00000337392 EPM2AB3EWF7 344 aa14.76□□□□□ -0.05
CLPTM1-201ENST00000337392 MRPL55Q7Z7F7 128 aaKnown RBP14.75□□□□□ -0.05
CLPTM1-201ENST00000337392 A0A1W2PNN7 141 aa14.75□□□□□ -0.05
CLPTM1-201ENST00000337392 ERC2-IT1O76042 136 aa14.75□□□□□ -0.05
CLPTM1-201ENST00000337392 TRBV7-6A0A0J9YX20 115 aa14.74□□□□□ -0.05
CLPTM1-201ENST00000337392 FAM19A1Q7Z5A9 133 aa14.74□□□□□ -0.05
CLPTM1-201ENST00000337392 FAM236DA0A1B0GTK5 79 aa14.72□□□□□ -0.05
CLPTM1-201ENST00000337392 KRTAP4-16G5E9R7 235 aaPredicted RBP14.72□□□□□ -0.05
CLPTM1-201ENST00000337392 FAM236CP0DP71 79 aa14.72□□□□□ -0.05
CLPTM1-201ENST00000337392 Q8N377 158 aa14.71□□□□□ -0.05
CLPTM1-201ENST00000337392 FRAS1Q86XX4 4008 aa14.71□□□□□ -0.05
CLPTM1-201ENST00000337392 LOC110117498A0A087WWA1 95 aa14.7□□□□□ -0.06
CLPTM1-201ENST00000337392 Q6ZRX8 168 aa14.7□□□□□ -0.06
CLPTM1-201ENST00000337392 SCXQ7RTU7 201 aa14.7□□□□□ -0.06
CLPTM1-201ENST00000337392 GHRHP01286 108 aa14.7□□□□□ -0.06
CLPTM1-201ENST00000337392 ETDCA0A1B0GVM5 59 aa14.69□□□□□ -0.06
CLPTM1-201ENST00000337392 C20orf197Q8N268 126 aa14.69□□□□□ -0.06
CLPTM1-201ENST00000337392 TRBV7-4A0A0J9YYF1 115 aa14.68□□□□□ -0.06
CLPTM1-201ENST00000337392 SEC61GP60059 68 aa14.68□□□□□ -0.06
CLPTM1-201ENST00000337392 KRTAP11-1Q8IUC1 163 aa14.68□□□□□ -0.06
CLPTM1-201ENST00000337392 PLA2G2DQ9UNK4 145 aa14.68□□□□□ -0.06
CLPTM1-201ENST00000337392 SERP1Q9Y6X1 66 aa14.68□□□□□ -0.06
CLPTM1-201ENST00000337392 HAMPP81172 84 aa14.67□□□□□ -0.06
CLPTM1-201ENST00000337392 LINC01547P58512 204 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-201ENST00000337392 UBL5Q9BZL1 73 aa14.67□□□□□ -0.06
CLPTM1-201ENST00000337392 UBE2BP63146 152 aa14.65□□□□□ -0.06
CLPTM1-201ENST00000337392 PRLHP81277 87 aa14.65□□□□□ -0.06
CLPTM1-201ENST00000337392 Q6ZVQ6 151 aa14.65□□□□□ -0.06
CLPTM1-201ENST00000337392 FP248Q71RG6 208 aaPredicted RBP14.65□□□□□ -0.06
CLPTM1-201ENST00000337392 IGLV5-37A0A075B6J1 123 aa14.64□□□□□ -0.07
CLPTM1-201ENST00000337392 A0A0G2JQZ4 141 aa14.64□□□□□ -0.07
CLPTM1-201ENST00000337392 NBDYA0A0U1RRE5 68 aa14.64□□□□□ -0.07
CLPTM1-201ENST00000337392 PANO1I0J062 215 aa14.63□□□□□ -0.07
CLPTM1-201ENST00000337392 SPRR1AP35321 89 aa14.63□□□□□ -0.07
CLPTM1-201ENST00000337392 C3orf84H3BNL1 204 aa14.62□□□□□ -0.07
CLPTM1-201ENST00000337392 PHF5AQ7RTV0 110 aaKnown RBP14.62□□□□□ -0.07
CLPTM1-201ENST00000337392 H7BZZ5 65 aa14.62□□□□□ -0.07
CLPTM1-201ENST00000337392 PRYO14603 147 aa14.62□□□□□ -0.07
CLPTM1-201ENST00000337392 C16orf90A8MZG2 172 aa14.61□□□□□ -0.07
CLPTM1-201ENST00000337392 LRCOL1A6NCL2 159 aa14.61□□□□□ -0.07
CLPTM1-201ENST00000337392 CNBPP62633 177 aaKnown RBP14.61□□□□□ -0.07
CLPTM1-201ENST00000337392 REG3GQ6UW15 175 aa14.6□□□□□ -0.07
CLPTM1-201ENST00000337392 A0A0U1RQV1 116 aa14.58□□□□□ -0.08
CLPTM1-201ENST00000337392 NUPR2A6NF83 97 aa14.58□□□□□ -0.08
CLPTM1-201ENST00000337392 V9GYY9 64 aa14.58□□□□□ -0.08
CLPTM1-201ENST00000337392 DNAH6Q9C0G6 4158 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms