RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FLNBO75369 2602 aaKnown RBP15.56■□□□□ 0.08
TSKU-201ENST00000333090 IGKV4-1P06312 121 aa15.55■□□□□ 0.08
TSKU-201ENST00000333090 KRTAP26-1Q6PEX3 210 aa15.55■□□□□ 0.08
TSKU-201ENST00000333090 Q6ZRP5 223 aa15.54■□□□□ 0.08
TSKU-201ENST00000333090 DEFB105AQ8NG35 78 aa15.54■□□□□ 0.08
TSKU-201ENST00000333090 SMIM26A0A096LP01 95 aa15.53■□□□□ 0.08
TSKU-201ENST00000333090 FP248Q71RG6 208 aaPredicted RBP15.53■□□□□ 0.08
TSKU-201ENST00000333090 KPRPQ5T749 579 aaPredicted RBP15.52■□□□□ 0.07
TSKU-201ENST00000333090 LINC00336Q6ZUF6 198 aa15.5■□□□□ 0.07
TSKU-201ENST00000333090 STAB1Q9NY15 2570 aa15.49■□□□□ 0.07
TSKU-201ENST00000333090 LINC00474Q9P2X8 69 aa15.48■□□□□ 0.07
TSKU-201ENST00000333090 F8P00451 2351 aa15.47■□□□□ 0.07
TSKU-201ENST00000333090 ATP5EP56381 51 aaPredicted RBP15.47■□□□□ 0.07
TSKU-201ENST00000333090 ERC2-IT1O76042 136 aa15.46■□□□□ 0.07
TSKU-201ENST00000333090 C1orf43Q9BWL3 253 aa15.46■□□□□ 0.07
TSKU-201ENST00000333090 OCR1Q9BZK8 76 aa15.46■□□□□ 0.07
TSKU-201ENST00000333090 TENM3Q9P273 2699 aa15.45■□□□□ 0.06
TSKU-201ENST00000333090 NKAPP1Q8N9T2 125 aa15.45■□□□□ 0.06
TSKU-201ENST00000333090 FBN1P35555 2871 aaKnown RBP15.45■□□□□ 0.06
TSKU-201ENST00000333090 IGKV2D-24A0A075B6R9 120 aa15.45■□□□□ 0.06
TSKU-201ENST00000333090 Q8N377 158 aa15.45■□□□□ 0.06
TSKU-201ENST00000333090 RETNQ9HD89 108 aa15.44■□□□□ 0.06
TSKU-201ENST00000333090 SERTAD4-AS1Q5TG53 156 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 PRYO14603 147 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 SYCNQ0VAF6 134 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 OXLD1Q5BKU9 147 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 Q6ZTC4 211 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 KCNQ1DNQ9H478 68 aa15.42■□□□□ 0.06
TSKU-201ENST00000333090 C7orf33Q8WU49 177 aa15.41■□□□□ 0.06
TSKU-201ENST00000333090 ESRGQ1W209 222 aa15.41■□□□□ 0.06
TSKU-201ENST00000333090 A0A0U1RQV1 116 aa15.4■□□□□ 0.06
TSKU-201ENST00000333090 MRAPQ8TCY5 172 aa15.4■□□□□ 0.06
TSKU-201ENST00000333090 HIGD2AQ9BW72 106 aa15.38■□□□□ 0.05
TSKU-201ENST00000333090 PRO0628Q9UI54 55 aa15.38■□□□□ 0.05
TSKU-201ENST00000333090 NOTCH1P46531 2555 aa15.38■□□□□ 0.05
TSKU-201ENST00000333090 IGLV5-48A0A075B6I7 105 aa15.37■□□□□ 0.05
TSKU-201ENST00000333090 H3BNG1 76 aa15.37■□□□□ 0.05
TSKU-201ENST00000333090 FUSP35637 526 aaKnown RBP eCLIP15.37■□□□□ 0.05
TSKU-201ENST00000333090 RPL37AP8A6NKH3 93 aa15.35■□□□□ 0.05
TSKU-201ENST00000333090 MAST4O15021 2626 aa15.35■□□□□ 0.05
TSKU-201ENST00000333090 FAM229BQ4G0N7 80 aa15.35■□□□□ 0.05
TSKU-201ENST00000333090 SMIM29Q86T20 159 aa15.34■□□□□ 0.05
TSKU-201ENST00000333090 FAM30AQ9NZY2 134 aa15.33■□□□□ 0.04
TSKU-201ENST00000333090 A0A1W2PNM2 257 aa15.32■□□□□ 0.04
TSKU-201ENST00000333090 Q6ZRX8 168 aa15.31■□□□□ 0.04
TSKU-201ENST00000333090 MPLKIPQ8TAP9 179 aa15.3■□□□□ 0.04
TSKU-201ENST00000333090 Q9BRP9 147 aa15.3■□□□□ 0.04
TSKU-201ENST00000333090 LINC01556Q5JQF7 62 aa15.3■□□□□ 0.04
TSKU-201ENST00000333090 DHRS4-AS1Q9P1J3 65 aa15.3■□□□□ 0.04
TSKU-201ENST00000333090 C1orf137Q5JT78 98 aa15.3■□□□□ 0.04
TSKU-201ENST00000333090 KRTAP10-11P60412 298 aa15.29■□□□□ 0.04
TSKU-201ENST00000333090 ST20-AS1Q8NBB2 130 aa15.29■□□□□ 0.04
TSKU-201ENST00000333090 FAM168BA1KXE4 195 aa15.28■□□□□ 0.04
TSKU-201ENST00000333090 F8WDY8 70 aa15.28■□□□□ 0.04
TSKU-201ENST00000333090 ETDCA0A1B0GVM5 59 aa15.27■□□□□ 0.03
TSKU-201ENST00000333090 CMYA5Q8N3K9 4069 aa15.26■□□□□ 0.03
TSKU-201ENST00000333090 TNP2Q05952 138 aa15.23■□□□□ 0.03
TSKU-201ENST00000333090 Q8NBF4 154 aa15.23■□□□□ 0.03
TSKU-201ENST00000333090 KRTAP4-16G5E9R7 235 aaPredicted RBP15.23■□□□□ 0.03
TSKU-201ENST00000333090 IGLV1-50A0A075B6I6 118 aa15.22■□□□□ 0.03
TSKU-201ENST00000333090 A0A1B0GW54 56 aa15.22■□□□□ 0.03
TSKU-201ENST00000333090 BRK1Q8WUW1 75 aa15.22■□□□□ 0.03
TSKU-201ENST00000333090 DEFB131BA0A096LNP1 70 aa15.21■□□□□ 0.03
TSKU-201ENST00000333090 TLX1NBP0CAT3 122 aa15.19■□□□□ 0.02
TSKU-201ENST00000333090 PLA2G2DQ9UNK4 145 aa15.18■□□□□ 0.02
TSKU-201ENST00000333090 SPRR1AP35321 89 aa15.17■□□□□ 0.02
TSKU-201ENST00000333090 DSCR10P59022 87 aa15.17■□□□□ 0.02
TSKU-201ENST00000333090 K7EQZ3 153 aa15.17■□□□□ 0.02
TSKU-201ENST00000333090 COL6A5A8TX70 2615 aa15.16■□□□□ 0.02
TSKU-201ENST00000333090 UBE2BP63146 152 aa15.16■□□□□ 0.02
TSKU-201ENST00000333090 SPRR4Q96PI1 79 aa15.16■□□□□ 0.02
TSKU-201ENST00000333090 CASC10Q5T4H9 136 aa15.15■□□□□ 0.02
TSKU-201ENST00000333090 KRTAP7-1Q8IUC3 87 aa15.15■□□□□ 0.02
TSKU-201ENST00000333090 PKIGQ9Y2B9 76 aa15.15■□□□□ 0.02
TSKU-201ENST00000333090 NBEAL1Q6ZS30 2694 aa15.15■□□□□ 0.02
TSKU-201ENST00000333090 PRB2P02812 416 aaPredicted RBP15.14■□□□□ 0.01
TSKU-201ENST00000333090 LCE6AA0A183 80 aa15.13■□□□□ 0.01
TSKU-201ENST00000333090 DNAH10OSP0CZ25 163 aa15.13■□□□□ 0.01
TSKU-201ENST00000333090 C11orf45Q8TAV5 145 aa15.13■□□□□ 0.01
TSKU-201ENST00000333090 IGLV5-37A0A075B6J1 123 aa15.12■□□□□ 0.01
TSKU-201ENST00000333090 KRTAP24-1Q3LI83 254 aa15.12■□□□□ 0.01
TSKU-201ENST00000333090 MRPL55Q7Z7F7 128 aaKnown RBP15.11■□□□□ 0.01
TSKU-201ENST00000333090 BAHCC1Q9P281 2608 aa15.1■□□□□ 0.01
TSKU-201ENST00000333090 A0A0G2JQZ4 141 aa15.09■□□□□ 0.01
TSKU-201ENST00000333090 A0A1W2PNN7 141 aa15.09■□□□□ 0.01
TSKU-201ENST00000333090 LRCOL1A6NCL2 159 aa15.09■□□□□ 0.01
TSKU-201ENST00000333090 hDV103S1A0JD37 113 aa15.07■□□□□ 0
TSKU-201ENST00000333090 LINC00476Q8WZB0 136 aa15.06■□□□□ 0
TSKU-201ENST00000333090 ZCCHC13Q8WW36 166 aaKnown RBP15.05■□□□□ 0
TSKU-201ENST00000333090 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.04■□□□□ -0
TSKU-201ENST00000333090 HCG22E2RYF7 251 aa15.04■□□□□ -0
TSKU-201ENST00000333090 C1orf64Q8NEQ6 169 aa15.04■□□□□ -0
TSKU-201ENST00000333090 DEFB116Q30KQ4 102 aa15.03■□□□□ -0
TSKU-201ENST00000333090 PSCAO43653 123 aa15.02■□□□□ -0
TSKU-201ENST00000333090 REG3GQ6UW15 175 aa15.02□□□□□ -0.01
TSKU-201ENST00000333090 LINC00588Q9Y4M8 146 aa15.01□□□□□ -0.01
TSKU-201ENST00000333090 PRR4Q16378 134 aa15.01□□□□□ -0.01
TSKU-201ENST00000333090 LYSTQ99698 3801 aa14.99□□□□□ -0.01
TSKU-201ENST00000333090 IGFL1Q6UW32 110 aa14.98□□□□□ -0.01
TSKU-201ENST00000333090 WFDC13Q8IUB5 93 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms