RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 IGLV9-49A0A0B4J1Y8 123 aa13.22□□□□□ -0.29
TMEM54-201ENST00000329151 DDTP30046 118 aa13.21□□□□□ -0.29
TMEM54-201ENST00000329151 MOBPQ13875 183 aa13.21□□□□□ -0.29
TMEM54-201ENST00000329151 HIST1H2BLQ99880 126 aa13.21□□□□□ -0.29
TMEM54-201ENST00000329151 A0A0J9YXY3 114 aa13.2□□□□□ -0.3
TMEM54-201ENST00000329151 LINC00483Q53H64 154 aa13.2□□□□□ -0.3
TMEM54-201ENST00000329151 KRTAP4-16G5E9R7 235 aaPredicted RBP13.19□□□□□ -0.3
TMEM54-201ENST00000329151 AKR1D1P51857 326 aa13.19□□□□□ -0.3
TMEM54-201ENST00000329151 KRTAP13-3Q3SY46 172 aa13.19□□□□□ -0.3
TMEM54-201ENST00000329151 B5MCH6 92 aa13.18□□□□□ -0.3
TMEM54-201ENST00000329151 S100A7L2Q5SY68 101 aa13.18□□□□□ -0.3
TMEM54-201ENST00000329151 SEC61BP60468 96 aaKnown RBP13.17□□□□□ -0.3
TMEM54-201ENST00000329151 SSBP3-AS1Q7Z2R9 100 aa13.17□□□□□ -0.3
TMEM54-201ENST00000329151 ATOH7Q8N100 152 aa13.17□□□□□ -0.3
TMEM54-201ENST00000329151 LOC107984156A0A0G2JMH3 177 aa13.16□□□□□ -0.3
TMEM54-201ENST00000329151 TRBV10-2A0A0K0K1G8 114 aa13.16□□□□□ -0.3
TMEM54-201ENST00000329151 SNRPEP62304 92 aaKnown RBP13.16□□□□□ -0.3
TMEM54-201ENST00000329151 ARL17AQ8IVW1 177 aa13.16□□□□□ -0.3
TMEM54-201ENST00000329151 ZNF815PA8K554 130 aa13.15□□□□□ -0.3
TMEM54-201ENST00000329151 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
TMEM54-201ENST00000329151 LINC01547P58512 204 aaPredicted RBP13.14□□□□□ -0.31
TMEM54-201ENST00000329151 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
TMEM54-201ENST00000329151 ASB16-AS1Q495Z4 193 aa13.14□□□□□ -0.31
TMEM54-201ENST00000329151 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
TMEM54-201ENST00000329151 SLC25A20O43772 301 aa13.13□□□□□ -0.31
TMEM54-201ENST00000329151 RPS29P62273 56 aaKnown RBP13.13□□□□□ -0.31
TMEM54-201ENST00000329151 ANKRD39Q53RE8 183 aa13.13□□□□□ -0.31
TMEM54-201ENST00000329151 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
TMEM54-201ENST00000329151 C9orf153Q5TBE3 101 aa13.13□□□□□ -0.31
TMEM54-201ENST00000329151 Q6ZRX8 168 aa13.12□□□□□ -0.31
TMEM54-201ENST00000329151 ERC2-IT1O76042 136 aa13.11□□□□□ -0.31
TMEM54-201ENST00000329151 TIMM17BO60830 172 aa13.1□□□□□ -0.31
TMEM54-201ENST00000329151 C5orf52A6NGY3 159 aa13.09□□□□□ -0.31
TMEM54-201ENST00000329151 NPC2P61916 151 aa13.09□□□□□ -0.31
TMEM54-201ENST00000329151 LITAFQ99732 161 aa13.09□□□□□ -0.31
TMEM54-201ENST00000329151 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
TMEM54-201ENST00000329151 HINT1P49773 126 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-201ENST00000329151 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
TMEM54-201ENST00000329151 Q8N377 158 aa13.08□□□□□ -0.32
TMEM54-201ENST00000329151 Q9BRP9 147 aa13.08□□□□□ -0.32
TMEM54-201ENST00000329151 NDUFC2O95298 119 aa13.07□□□□□ -0.32
TMEM54-201ENST00000329151 CBY1Q9Y3M2 126 aa13.07□□□□□ -0.32
TMEM54-201ENST00000329151 EIF4EBP3O60516 100 aaPredicted RBP13.06□□□□□ -0.32
TMEM54-201ENST00000329151 SCGB1D4Q6XE38 83 aa13.05□□□□□ -0.32
TMEM54-201ENST00000329151 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
TMEM54-201ENST00000329151 LINC00308Q8TCZ7 52 aa13.04□□□□□ -0.32
TMEM54-201ENST00000329151 KRTAP9-6A0A140TA67 174 aa13.03□□□□□ -0.32
TMEM54-201ENST00000329151 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
TMEM54-201ENST00000329151 HSBP1L1C9JCN9 74 aa13.02□□□□□ -0.33
TMEM54-201ENST00000329151 ZNF73O43830 326 aaPredicted RBP13.02□□□□□ -0.33
TMEM54-201ENST00000329151 SCGB1D1O95968 90 aa13□□□□□ -0.33
TMEM54-201ENST00000329151 SPANXCQ9NY87 97 aa12.99□□□□□ -0.33
TMEM54-201ENST00000329151 SPANXDQ9BXN6 97 aa12.98□□□□□ -0.33
TMEM54-201ENST00000329151 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
TMEM54-201ENST00000329151 OR13C6PQ8NH95 151 aa12.96□□□□□ -0.33
TMEM54-201ENST00000329151 ST20-AS1Q8NBB2 130 aa12.95□□□□□ -0.34
TMEM54-201ENST00000329151 LIMD2Q9BT23 127 aa12.95□□□□□ -0.34
TMEM54-201ENST00000329151 XP32Q5T750 250 aa12.93□□□□□ -0.34
TMEM54-201ENST00000329151 Q6ZVH6 145 aa12.93□□□□□ -0.34
TMEM54-201ENST00000329151 COPS9Q8WXC6 57 aa12.93□□□□□ -0.34
TMEM54-201ENST00000329151 IFITM1P13164 125 aa12.92□□□□□ -0.34
TMEM54-201ENST00000329151 KRTAP4-1Q9BYQ7 146 aa12.91□□□□□ -0.34
TMEM54-201ENST00000329151 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
TMEM54-201ENST00000329151 LINC00518Q8N0U6 118 aa12.9□□□□□ -0.34
TMEM54-201ENST00000329151 LAMTOR3Q9UHA4 124 aa12.9□□□□□ -0.34
TMEM54-201ENST00000329151 HRCT1Q6UXD1 115 aa12.89□□□□□ -0.35
TMEM54-201ENST00000329151 MUSTN1Q8IVN3 82 aa12.88□□□□□ -0.35
TMEM54-201ENST00000329151 TAL2Q16559 108 aa12.83□□□□□ -0.36
TMEM54-201ENST00000329151 TMA7Q9Y2S6 64 aaKnown RBP12.83□□□□□ -0.36
TMEM54-201ENST00000329151 COX8AP10176 69 aa12.82□□□□□ -0.36
TMEM54-201ENST00000329151 SPRR1BP22528 89 aa12.82□□□□□ -0.36
TMEM54-201ENST00000329151 COX7BP24311 80 aa12.82□□□□□ -0.36
TMEM54-201ENST00000329151 C9orf92A6NGG3 77 aa12.8□□□□□ -0.36
TMEM54-201ENST00000329151 PAM16Q9Y3D7 125 aa12.8□□□□□ -0.36
TMEM54-201ENST00000329151 A6NDN8 102 aa12.79□□□□□ -0.36
TMEM54-201ENST00000329151 DEFB105AQ8NG35 78 aa12.79□□□□□ -0.36
TMEM54-201ENST00000329151 VAMP8Q9BV40 100 aa12.79□□□□□ -0.36
TMEM54-201ENST00000329151 SPATA45Q537H7 98 aa12.78□□□□□ -0.36
TMEM54-201ENST00000329151 DLEU1O43261 78 aa12.77□□□□□ -0.37
TMEM54-201ENST00000329151 Q1RN00 199 aa12.77□□□□□ -0.37
TMEM54-201ENST00000329151 PRO1933Q9H354 126 aa12.77□□□□□ -0.37
TMEM54-201ENST00000329151 IGLV8-61A0A075B6I0 122 aa12.76□□□□□ -0.37
TMEM54-201ENST00000329151 ELOF1P60002 83 aaKnown RBP12.76□□□□□ -0.37
TMEM54-201ENST00000329151 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
TMEM54-201ENST00000329151 PCOTHQ58A44 107 aa12.76□□□□□ -0.37
TMEM54-201ENST00000329151 C14orf144Q96I85 54 aa12.76□□□□□ -0.37
TMEM54-201ENST00000329151 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
TMEM54-201ENST00000329151 H7C2G1 150 aa12.74□□□□□ -0.37
TMEM54-201ENST00000329151 LCE2DQ5TA82 110 aaPredicted RBP12.74□□□□□ -0.37
TMEM54-201ENST00000329151 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
TMEM54-201ENST00000329151 CD164Q04900 197 aa12.73□□□□□ -0.37
TMEM54-201ENST00000329151 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
TMEM54-201ENST00000329151 A4D1N5 150 aa12.72□□□□□ -0.37
TMEM54-201ENST00000329151 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
TMEM54-201ENST00000329151 TRBV7-6A0A0J9YX20 115 aa12.69□□□□□ -0.38
TMEM54-201ENST00000329151 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
TMEM54-201ENST00000329151 A0A1B0GWB2 263 aa12.66□□□□□ -0.38
TMEM54-201ENST00000329151 CFC1BP0CG36 223 aa12.66□□□□□ -0.38
TMEM54-201ENST00000329151 SMIM11BQ8TCY0 68 aa12.66□□□□□ -0.38
TMEM54-201ENST00000329151 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms